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IVF0000232 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0000232
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGlutamate--tRNA ligase
Genome locationchr04:17777648..17778084
RNA-Seq ExpressionIVF0000232
SyntenyIVF0000232
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058525.1 putative transmembrane protein [Cucumis melo var. makuwa]4.87e-74100Show/hide
Query:  MDSNYCAYVNQNSSLRPLAIVLALASAVALSPLRSYETSWSSGFVVPLVLLGLIIAIKTSSCCSSTSRDSAILPSDHPSWVLKIGSSSWGLAGILMMLIL
        MDSNYCAYVNQNSSLRPLAIVLALASAVALSPLRSYETSWSSGFVVPLVLLGLIIAIKTSSCCSSTSRDSAILPSDHPSWVLKIGSSSWGLAGILMMLIL
Subjt:  MDSNYCAYVNQNSSLRPLAIVLALASAVALSPLRSYETSWSSGFVVPLVLLGLIIAIKTSSCCSSTSRDSAILPSDHPSWVLKIGSSSWGLAGILMMLIL

Query:  GLSWQSSVQEFLWR
        GLSWQSSVQEFLWR
Subjt:  GLSWQSSVQEFLWR

KAE8637311.1 hypothetical protein CSA_023553, partial [Cucumis sativus]6.79e-6893.86Show/hide
Query:  MDSNYCAYVNQNSSLRPLAIVLALASAVALSPLRSYETSWSSGFVVPLVLLGLIIAIKTSSCCSSTSRDSAILPSDHPSWVLKIGSSSWGLAGILMMLIL
        MDSNY AY NQNSS RPLAI LALASAV LSPLRSYETSWSSGFVVPLVLLGLI+AIKTSS CSSTSRDSAILPSDHPSWVLKIGSSSWGLAGILMMLIL
Subjt:  MDSNYCAYVNQNSSLRPLAIVLALASAVALSPLRSYETSWSSGFVVPLVLLGLIIAIKTSSCCSSTSRDSAILPSDHPSWVLKIGSSSWGLAGILMMLIL

Query:  GLSWQSSVQEFLWR
        GLSWQSSVQEFLWR
Subjt:  GLSWQSSVQEFLWR

KAF7814039.1 hypothetical protein G2W53_028008 [Senna tora]1.01e-3963.64Show/hide
Query:  YCAYVNQNSSLRPLAIVLALASAVALSPL-----------RSYETSWSSGFVVPLVLLGLIIAIKTSSCCSSTSRDSAILPSDHPSWVLKIGSSSWGLAG
        Y AY +Q SS R LA+VLALASAV LSPL           R YE+ WS GFV+P++L GLIIAI+TSS  SST R S +LPS  PSWVL+IGSSSWGLAG
Subjt:  YCAYVNQNSSLRPLAIVLALASAVALSPL-----------RSYETSWSSGFVVPLVLLGLIIAIKTSSCCSSTSRDSAILPSDHPSWVLKIGSSSWGLAG

Query:  ILMMLILGLSWQSSVQEFLWR
        +L+ML+L L WQ+SVQEF WR
Subjt:  ILMMLILGLSWQSSVQEFLWR

KAG6581812.1 hypothetical protein SDJN03_21814, partial [Cucurbita argyrosperma subsp. sororia]7.46e-5481.51Show/hide
Query:  MDSNYCAYVNQNSSLRPLAIVLALASAVALSPLRSYETSWSSGFVVPLVLLGLIIAIKTSSCCSSTS-----RDSAILPSDHPSWVLKIGSSSWGLAGIL
        MDSNY AY NQ SS RPLAIVLALASAV LSPLR YE+ WSSGFV+PLVLL LIIAIKTSS CSS S     RDSAIL SD PSWVLKIGSSSWGLAG+L
Subjt:  MDSNYCAYVNQNSSLRPLAIVLALASAVALSPLRSYETSWSSGFVVPLVLLGLIIAIKTSSCCSSTS-----RDSAILPSDHPSWVLKIGSSSWGLAGIL

Query:  MMLILGLSWQSSVQEFLWR
        MMLI GLSWQSSV+EFLWR
Subjt:  MMLILGLSWQSSVQEFLWR

XP_030969466.1 uncharacterized protein LOC115989757 [Quercus lobata]4.44e-4064.41Show/hide
Query:  YVNQNSSLRPLAIVLALASAVALSPL--------RSYETSWSSGFVVPLVLLGLIIAIKTSSCCSSTSRD---SAILPSDHPSWVLKIGSSSWGLAGILM
        Y +Q SS R +A+VLAL SA+ LSPL        R YET WSSGFV+P+VL GLIIAIKT+S CSS S     ++I+PS  PSWVL+IGSSSWGLAGIL+
Subjt:  YVNQNSSLRPLAIVLALASAVALSPL--------RSYETSWSSGFVVPLVLLGLIIAIKTSSCCSSTSRD---SAILPSDHPSWVLKIGSSSWGLAGILM

Query:  MLILGLSWQSSVQEFLWR
        ML+L LSWQ SVQEF WR
Subjt:  MLILGLSWQSSVQEFLWR

TrEMBL top hitse value%identityAlignment
A0A067KX22 Uncharacterized protein2.9e-2863.87Show/hide
Query:  YCAYVNQNSSLRPLAIVLALASAVALSP---------LRSYETSWSSGFVVPLVLLGLIIAIKTSSCCSSTSRDSAILPSDHPSWVLKIGSSSWGLAGIL
        Y  Y +QNSS R LA+VLAL SAV LSP         LR YET WSSGFV+P+VL GLIIAI+T+S  SS  R  +++P   PSWVL+IGSSSWGLAGIL
Subjt:  YCAYVNQNSSLRPLAIVLALASAVALSP---------LRSYETSWSSGFVVPLVLLGLIIAIKTSSCCSSTSRDSAILPSDHPSWVLKIGSSSWGLAGIL

Query:  MMLILGLSWQSSVQEFLWR
        +ML+L LSWQ SVQEF WR
Subjt:  MMLILGLSWQSSVQEFLWR

A0A0A0LEN3 Uncharacterized protein2.1e-5093.86Show/hide
Query:  MDSNYCAYVNQNSSLRPLAIVLALASAVALSPLRSYETSWSSGFVVPLVLLGLIIAIKTSSCCSSTSRDSAILPSDHPSWVLKIGSSSWGLAGILMMLIL
        MDSNY AY NQNSS RPLAI LALASAV LSPLRSYETSWSSGFVVPLVLLGLI+AIKTSS CSSTSRDSAILPSDHPSWVLKIGSSSWGLAGILMMLIL
Subjt:  MDSNYCAYVNQNSSLRPLAIVLALASAVALSPLRSYETSWSSGFVVPLVLLGLIIAIKTSSCCSSTSRDSAILPSDHPSWVLKIGSSSWGLAGILMMLIL

Query:  GLSWQSSVQEFLWR
        GLSWQSSVQEFLWR
Subjt:  GLSWQSSVQEFLWR

A0A2N9IBH6 Uncharacterized protein2.3e-2861.34Show/hide
Query:  YVNQNSSLRPLAIVLALASAVALSPLRS--------YETSWSSGFVVPLVLLGLIIAIKTSSCCSSTSRD----SAILPSDHPSWVLKIGSSSWGLAGIL
        Y  Q SS R +A+VL+L SA+ LSPL +        YET WSSGFV+P+VL+GLIIAI+T+S CSS S      ++I+PS  PSWVL+IGSSSWGLAGIL
Subjt:  YVNQNSSLRPLAIVLALASAVALSPLRS--------YETSWSSGFVVPLVLLGLIIAIKTSSCCSSTSRD----SAILPSDHPSWVLKIGSSSWGLAGIL

Query:  MMLILGLSWQSSVQEFLWR
        +ML+L LSWQ+SVQEF WR
Subjt:  MMLILGLSWQSSVQEFLWR

A0A5A7UY99 Putative transmembrane protein4.8e-55100Show/hide
Query:  MDSNYCAYVNQNSSLRPLAIVLALASAVALSPLRSYETSWSSGFVVPLVLLGLIIAIKTSSCCSSTSRDSAILPSDHPSWVLKIGSSSWGLAGILMMLIL
        MDSNYCAYVNQNSSLRPLAIVLALASAVALSPLRSYETSWSSGFVVPLVLLGLIIAIKTSSCCSSTSRDSAILPSDHPSWVLKIGSSSWGLAGILMMLIL
Subjt:  MDSNYCAYVNQNSSLRPLAIVLALASAVALSPLRSYETSWSSGFVVPLVLLGLIIAIKTSSCCSSTSRDSAILPSDHPSWVLKIGSSSWGLAGILMMLIL

Query:  GLSWQSSVQEFLWR
        GLSWQSSVQEFLWR
Subjt:  GLSWQSSVQEFLWR

A0A7N2LMQ6 Uncharacterized protein2.0e-2964.41Show/hide
Query:  YVNQNSSLRPLAIVLALASAVALSPL--------RSYETSWSSGFVVPLVLLGLIIAIKTSSCCSSTSRD---SAILPSDHPSWVLKIGSSSWGLAGILM
        Y +Q SS R +A+VLAL SA+ LSPL        R YET WSSGFV+P+VL GLIIAIKT+S CSS S     ++I+PS  PSWVL+IGSSSWGLAGIL+
Subjt:  YVNQNSSLRPLAIVLALASAVALSPL--------RSYETSWSSGFVVPLVLLGLIIAIKTSSCCSSTSRD---SAILPSDHPSWVLKIGSSSWGLAGILM

Query:  MLILGLSWQSSVQEFLWR
        ML+L LSWQ SVQEF WR
Subjt:  MLILGLSWQSSVQEFLWR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAGTAACTACTGCGCTTACGTGAACCAGAACTCGTCTCTGAGACCACTGGCCATTGTTTTGGCTCTTGCTTCTGCAGTGGCGCTCTCACCATTAAGATCCTATGA
AACCAGTTGGAGCTCTGGATTTGTTGTTCCACTAGTTCTTTTGGGACTTATAATTGCCATTAAGACATCATCATGTTGCTCATCCACATCCAGAGATTCTGCAATTCTCC
CTTCAGATCATCCTTCATGGGTTCTTAAAATTGGGAGCTCCTCTTGGGGACTTGCAGGGATCTTAATGATGTTGATTCTTGGGCTTTCTTGGCAAAGTTCTGTTCAAGAA
TTCCTCTGGAGATGA
mRNA sequenceShow/hide mRNA sequence
GATAAAACCCAAAATCATGGATAGTAACTACTGCGCTTACGTGAACCAGAACTCGTCTCTGAGACCACTGGCCATTGTTTTGGCTCTTGCTTCTGCAGTGGCGCTCTCAC
CATTAAGATCCTATGAAACCAGTTGGAGCTCTGGATTTGTTGTTCCACTAGTTCTTTTGGGACTTATAATTGCCATTAAGACATCATCATGTTGCTCATCCACATCCAGA
GATTCTGCAATTCTCCCTTCAGATCATCCTTCATGGGTTCTTAAAATTGGGAGCTCCTCTTGGGGACTTGCAGGGATCTTAATGATGTTGATTCTTGGGCTTTCTTGGCA
AAGTTCTGTTCAAGAATTCCTCTGGAGATGAGAACCAAAACCGATTTGAATTCCTAATTTTGTATGACTTATAATCTTGTATTGTTCCCACCAGATATGGATTAAAA
Protein sequenceShow/hide protein sequence
MDSNYCAYVNQNSSLRPLAIVLALASAVALSPLRSYETSWSSGFVVPLVLLGLIIAIKTSSCCSSTSRDSAILPSDHPSWVLKIGSSSWGLAGILMMLILGLSWQSSVQE
FLWR