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IVF0000233 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0000233
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionDynein light chain
Genome locationchr04:8247828..8249286
RNA-Seq ExpressionIVF0000233
SyntenyIVF0000233
Gene Ontology termsGO:0007017 - microtubule-based process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005874 - microtubule (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0030286 - dynein complex (cellular component)
GO:0045505 - dynein intermediate chain binding (molecular function)
GO:0051959 - dynein light intermediate chain binding (molecular function)
InterPro domainsIPR001372 - Dynein light chain, type 1/2
IPR037177 - Dynein light chain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607846.1 hypothetical protein SDJN03_01188, partial [Cucurbita argyrosperma subsp. sororia]1.26e-5880.87Show/hide
Query:  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFRGSAASQEQQLV
        MLEGKAI+GETDML+AMQQDAL+LA+KALD FDVTEATDIARFIKKEFDRT+GGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLA+LLFRGS A Q+    
Subjt:  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFRGSAASQEQQLV

Query:  PDPSTHHFSLIDTLK
        P P+  HF   +TLK
Subjt:  PDPSTHHFSLIDTLK

XP_004146843.1 dynein light chain 2, cytoplasmic [Cucumis sativus]1.23e-6889.74Show/hide
Query:  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFRGSAASQEQQLV
        MLEGKAI+GETDMLEAMQQDALNLA+KALDSFDVTEATDIARFIKKEFDR +GGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLA+LLFRGSAASQ+QQ  
Subjt:  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFRGSAASQEQQLV

Query:  PDPSTHHFSLID-TLKP
        P+P THHFSL+D TLKP
Subjt:  PDPSTHHFSLID-TLKP

XP_008454627.1 PREDICTED: dynein light chain LC6, flagellar outer arm [Cucumis melo]1.50e-78100Show/hide
Query:  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFRGSAASQEQQLV
        MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFRGSAASQEQQLV
Subjt:  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFRGSAASQEQQLV

Query:  PDPSTHHFSLIDTLKP
        PDPSTHHFSLIDTLKP
Subjt:  PDPSTHHFSLIDTLKP

XP_022941140.1 dynein light chain 2, cytoplasmic-like [Cucurbita moschata]6.23e-5980.87Show/hide
Query:  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFRGSAASQEQQLV
        MLEGKAI+GETDML+AMQQDAL+LA+KALD FDVTEATDIARFIKKEFDRT+GGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLA+LLFRGS A Q+    
Subjt:  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFRGSAASQEQQLV

Query:  PDPSTHHFSLIDTLK
        P P+  HF+  +TLK
Subjt:  PDPSTHHFSLIDTLK

XP_038899068.1 dynein light chain 2, cytoplasmic [Benincasa hispida]3.46e-6384.35Show/hide
Query:  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFRGSAASQEQQLV
        MLEGKAIIGETDML+AMQQDALNLA+KALDSFDVTEATDIARFIKKEFD+ YGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLA+LLFRGSAAS+E+Q  
Subjt:  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFRGSAASQEQQLV

Query:  PDPSTHHFSLIDTLK
          P    FS+++TLK
Subjt:  PDPSTHHFSLIDTLK

TrEMBL top hitse value%identityAlignment
A0A0D2M811 Dynein light chain1.6e-4276.52Show/hide
Query:  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFRGSAASQEQQLV
        MLEGKA++GETDML+ MQQ AL++A+KALD FDVTEAT+IARFIKKEFDR YG GWQCIVGTDFGSFVTHC GCFIYFC+GSLA+LLFRGSAA++     
Subjt:  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFRGSAASQEQQLV

Query:  PDPSTHHFSLIDTLK
        PDP  HHFS ++TLK
Subjt:  PDPSTHHFSLIDTLK

A0A1S3BZU7 Dynein light chain2.5e-59100Show/hide
Query:  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFRGSAASQEQQLV
        MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFRGSAASQEQQLV
Subjt:  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFRGSAASQEQQLV

Query:  PDPSTHHFSLIDTLKP
        PDPSTHHFSLIDTLKP
Subjt:  PDPSTHHFSLIDTLKP

A0A5A7T1H5 Dynein light chain2.5e-59100Show/hide
Query:  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFRGSAASQEQQLV
        MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFRGSAASQEQQLV
Subjt:  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFRGSAASQEQQLV

Query:  PDPSTHHFSLIDTLKP
        PDPSTHHFSLIDTLKP
Subjt:  PDPSTHHFSLIDTLKP

A0A6J1FSQ1 Dynein light chain3.0e-4480Show/hide
Query:  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFRGSAASQEQQLV
        MLEGKAI+GETDML+AMQQDAL+LA+KALD FDVTEATDIARFIKKEFDRT+GGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLA+LLFRGS A Q+    
Subjt:  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFRGSAASQEQQLV

Query:  PDPSTHHFSLIDTLK
          P   HF+  +TLK
Subjt:  PDPSTHHFSLIDTLK

A0A6J1J2G7 Dynein light chain1.5e-4379.13Show/hide
Query:  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFRGSAASQEQQLV
        MLEGKAI+GETDML+AMQQDAL+LA+KALD FDVTEATDIARFIKKEFDRT+GGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLA+LLFRGS A Q+    
Subjt:  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFRGSAASQEQQLV

Query:  PDPSTHHFSLIDTLK
          P   H +  +TLK
Subjt:  PDPSTHHFSLIDTLK

SwissProt top hitse value%identityAlignment
O02414 Dynein light chain LC6, flagellar outer arm6.0e-1853.93Show/hide
Query:  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFR
        M E KA+I   DM E MQQDA++ A++AL+ F++ +  DIA +IKKEFD+ Y   W CIVG +FGS+VTH    FIYF +G +AVLLF+
Subjt:  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFR

O96860 Dynein light chain 2, cytoplasmic1.0e-1751.69Show/hide
Query:  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFR
        M + KA+I   DM E MQQDA++ A++AL+ +++ +  DIA FIKKEFD+ Y   W CIVG +FGS+VTH    FIYF +G +A+LLF+
Subjt:  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFR

Q22799 Dynein light chain 1, cytoplasmic2.3e-1749.44Show/hide
Query:  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFR
        M++ KA+I   DM + MQQDA++ A++AL+ +++ +  DIA +IKKEFD+ Y   W CIVG +FGS+VTH    FIYF +G +A+LLF+
Subjt:  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFR

Q24117 Dynein light chain 1, cytoplasmic2.3e-1750.56Show/hide
Query:  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFR
        M + KA+I   DM E MQQDA++ A++AL+ +++ +  DIA +IKKEFD+ Y   W CIVG +FGS+VTH    FIYF +G +A+LLF+
Subjt:  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFR

Q3MHR3 Dynein light chain 2, cytoplasmic5.1e-1749.44Show/hide
Query:  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFR
        M + KA+I   DM E MQQDA++ A++A++ +++ +  DIA +IKKEFD+ Y   W CIVG +FGS+VTH    FIYF +G +A+LLF+
Subjt:  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFR

Arabidopsis top hitse value%identityAlignment
AT1G52240.2 RHO guanyl-nucleotide exchange factor 115.4e-2253.26Show/hide
Query:  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFRGSA
        MLEGKA++ ++DM   MQ  A+  AS+ALD FDV +   IA  IKKEFD  YG GWQC+VG++FG F TH  G FIYF + +L  L+F+G++
Subjt:  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFRGSA

AT3G16120.1 Dynein light chain type 1 family protein7.5e-2457.14Show/hide
Query:  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFRGS
        MLEGKA + ETDM   MQ  A+ +AS++LD FDV ++  IA  IKKEFD  YG GWQC+VGT+FG F TH  G FIYF +G+L  L+F+G+
Subjt:  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFRGS

AT4G15930.1 Dynein light chain type 1 family protein1.1e-1445.88Show/hide
Query:  KAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFR
        +A+I   DM + MQ++A+ +A  A + + V +  DIA  IKKEFD+ +G  W CIVG +FGS+VTH    F+YF +   AVLLF+
Subjt:  KAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFR

AT4G27360.1 Dynein light chain type 1 family protein1.3e-3676.92Show/hide
Query:  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFRGS
        MLEGKA++G+TDM + M++DAL+LASKALD FDVTE T IARFIKKEFDR+YG GWQCIVGT FGSFVTHC GCFI+F VGSL +LLF+GS
Subjt:  MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFRGS

AT5G20110.1 Dynein light chain type 1 family protein6.4e-1551.28Show/hide
Query:  DMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFR
        DM   MQ  A   A   LDS +   +  +A  +KKEFD+ YG  W CIVG+ FGSFVTH  GCFIYF +  L VLLF+
Subjt:  DMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAGAAGGGAAAGCAATCATCGGAGAAACGGATATGCTGGAGGCCATGCAACAGGACGCTTTGAACCTTGCATCTAAGGCACTTGACAGTTTTGATGTCACTGAAGC
CACTGACATCGCCCGTTTCATTAAAAAGGAATTTGACAGGACATATGGGGGAGGATGGCAATGCATAGTGGGGACAGATTTTGGATCATTTGTGACACACTGTTTTGGAT
GCTTCATTTACTTTTGTGTTGGAAGTCTTGCAGTTTTGCTCTTTAGAGGTTCTGCTGCCTCTCAAGAACAACAATTAGTACCTGACCCATCAACTCATCACTTTTCTCTT
ATCGACACTCTCAAACCATGA
mRNA sequenceShow/hide mRNA sequence
GAAGGATACATTGATGTGGGTGAGGCTAGGAACAGAACACCAATCAAAGTTTATCCCAAAACTCTATATAACTAAACTAGTGTTCCCTTCAAGTCCTCCGCCCACAGCCA
CCACCGTAAGCTCCCTCGTGTGTGAGTGATATAATATTGATTATTTTAGCCATGTTAGAAGGGAAAGCAATCATCGGAGAAACGGATATGCTGGAGGCCATGCAACAGGA
CGCTTTGAACCTTGCATCTAAGGCACTTGACAGTTTTGATGTCACTGAAGCCACTGACATCGCCCGTTTCATTAAAAAGGAATTTGACAGGACATATGGGGGAGGATGGC
AATGCATAGTGGGGACAGATTTTGGATCATTTGTGACACACTGTTTTGGATGCTTCATTTACTTTTGTGTTGGAAGTCTTGCAGTTTTGCTCTTTAGAGGTTCTGCTGCC
TCTCAAGAACAACAATTAGTACCTGACCCATCAACTCATCACTTTTCTCTTATCGACACTCTCAAACCATGATTACTATATTACACTTTTCTTTCTTGATTTCTGATCTC
TTCTCTTATATCATCATCTCATATCCCCAAATTTTTATCTTATAATTAGTATGTGCTATATGTATCAAAGTGCTTTTTTAAATGCTTAAATCACTTTTAATTTTCTTCTC
AATATCCACTCCCCCGTTAATTTTATCTTGTTTTTTAATTTAGGGTTGCTAATAATTTTGAAATTTTCACATATATTCCCAC
Protein sequenceShow/hide protein sequence
MLEGKAIIGETDMLEAMQQDALNLASKALDSFDVTEATDIARFIKKEFDRTYGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAVLLFRGSAASQEQQLVPDPSTHHFSL
IDTLKP