; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0000271 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0000271
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionExonuclease domain-containing protein
Genome locationchr02:475294..477738
RNA-Seq ExpressionIVF0000271
SyntenyIVF0000271
Gene Ontology termsGO:0000738 - DNA catabolic process, exonucleolytic (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008296 - 3'-5'-exodeoxyribonuclease activity (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily
IPR013520 - Exonuclease, RNase T/DNA polymerase III
IPR036397 - Ribonuclease H superfamily
IPR040393 - Three-prime repair exonuclease 1/2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ALG62680.1 exonuclease DPD1 [Cucumis sativus]4.41e-20988.69Show/hide
Query:  MCFSIFRFPKFGVPILANLWRENFHPLNRNHGHSCWYDQLCFRIYNLEGGQNKRWTRKSITTKAGGKAKTNPSSKPTNITNEILQESMSASCTVNVNKSE
        MC SIFRFPK+GVP+LANLWRENFHPLNRNHGH+CWYDQLCFRIYNLEGG+NKRWTRKSITTKAG KAKTNPSSKPTNI NEILQES+ ASCTVN+NKSE
Subjt:  MCFSIFRFPKFGVPILANLWRENFHPLNRNHGHSCWYDQLCFRIYNLEGGQNKRWTRKSITTKAGGKAKTNPSSKPTNITNEILQESMSASCTVNVNKSE

Query:  KSGTQKLQYCDIQPTIIKSKEFIHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLIDPQCYITNSSIHGITNNMVASCGVPRMQELIPIIL
        KS TQKLQYCDIQPTIIKSKEF H VTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLI+PQCYITNS+IHGI+N MV S  VP MQELIPIIL
Subjt:  KSGTQKLQYCDIQPTIIKSKEFIHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLIDPQCYITNSSIHGITNNMVASCGVPRMQELIPIIL

Query:  QFVKSRQKPGGYVLLVAHNARTFDVPFLLHEFSRYSIDIPQDWLFLDTMTLARQLMKLSDSKITKISLEALCEYYGIEVDGEAHRALPDVISLSLILQRL
        QFVKSRQKPGGYVLLVAHNARTFDVPFLL EFSRYS+DIP +WLF DTMTLARQLMKLSDSKITKI+L+AL EYYGI++DG+AHRAL DV  LS ILQRL
Subjt:  QFVKSRQKPGGYVLLVAHNARTFDVPFLLHEFSRYSIDIPQDWLFLDTMTLARQLMKLSDSKITKISLEALCEYYGIEVDGEAHRALPDVISLSLILQRL

Query:  TFDLKLDVSDLVERAFTPLDLINKKKK
        TFDLKLD+SDLVERAFTPLDLINKKKK
Subjt:  TFDLKLDVSDLVERAFTPLDLINKKKK

XP_004135590.1 exonuclease DPD1, chloroplastic/mitochondrial [Cucumis sativus]1.32e-21089.3Show/hide
Query:  MCFSIFRFPKFGVPILANLWRENFHPLNRNHGHSCWYDQLCFRIYNLEGGQNKRWTRKSITTKAGGKAKTNPSSKPTNITNEILQESMSASCTVNVNKSE
        MC SIFRFPK+GVP+LANLWRENFHPLNRNHGH+CWYDQLCFRIYNLEGG+NKRWTRKSITTKAG KAKTNPSSKPTNI NEILQESM ASCTVN+NKSE
Subjt:  MCFSIFRFPKFGVPILANLWRENFHPLNRNHGHSCWYDQLCFRIYNLEGGQNKRWTRKSITTKAGGKAKTNPSSKPTNITNEILQESMSASCTVNVNKSE

Query:  KSGTQKLQYCDIQPTIIKSKEFIHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLIDPQCYITNSSIHGITNNMVASCGVPRMQELIPIIL
        KS TQKLQYCDIQPTIIKSKEF H VTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLI+PQCYITNS+IHGI+N MV S  VPRMQELIPIIL
Subjt:  KSGTQKLQYCDIQPTIIKSKEFIHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLIDPQCYITNSSIHGITNNMVASCGVPRMQELIPIIL

Query:  QFVKSRQKPGGYVLLVAHNARTFDVPFLLHEFSRYSIDIPQDWLFLDTMTLARQLMKLSDSKITKISLEALCEYYGIEVDGEAHRALPDVISLSLILQRL
        QFVKSRQKPGGYVLLVAHNARTFDVPFLL EFSRYS+DIP +WLF DTMTLARQLMKLSDSKITKI+L+AL EYYGI++DG+AHRAL DV  LS ILQRL
Subjt:  QFVKSRQKPGGYVLLVAHNARTFDVPFLLHEFSRYSIDIPQDWLFLDTMTLARQLMKLSDSKITKISLEALCEYYGIEVDGEAHRALPDVISLSLILQRL

Query:  TFDLKLDVSDLVERAFTPLDLINKKKK
        TFDLKLD+SDLVERAFTPLDLINKKKK
Subjt:  TFDLKLDVSDLVERAFTPLDLINKKKK

XP_008450585.1 PREDICTED: exonuclease DPD1, chloroplastic/mitochondrial [Cucumis melo]5.90e-239100Show/hide
Query:  MCFSIFRFPKFGVPILANLWRENFHPLNRNHGHSCWYDQLCFRIYNLEGGQNKRWTRKSITTKAGGKAKTNPSSKPTNITNEILQESMSASCTVNVNKSE
        MCFSIFRFPKFGVPILANLWRENFHPLNRNHGHSCWYDQLCFRIYNLEGGQNKRWTRKSITTKAGGKAKTNPSSKPTNITNEILQESMSASCTVNVNKSE
Subjt:  MCFSIFRFPKFGVPILANLWRENFHPLNRNHGHSCWYDQLCFRIYNLEGGQNKRWTRKSITTKAGGKAKTNPSSKPTNITNEILQESMSASCTVNVNKSE

Query:  KSGTQKLQYCDIQPTIIKSKEFIHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLIDPQCYITNSSIHGITNNMVASCGVPRMQELIPIIL
        KSGTQKLQYCDIQPTIIKSKEFIHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLIDPQCYITNSSIHGITNNMVASCGVPRMQELIPIIL
Subjt:  KSGTQKLQYCDIQPTIIKSKEFIHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLIDPQCYITNSSIHGITNNMVASCGVPRMQELIPIIL

Query:  QFVKSRQKPGGYVLLVAHNARTFDVPFLLHEFSRYSIDIPQDWLFLDTMTLARQLMKLSDSKITKISLEALCEYYGIEVDGEAHRALPDVISLSLILQRL
        QFVKSRQKPGGYVLLVAHNARTFDVPFLLHEFSRYSIDIPQDWLFLDTMTLARQLMKLSDSKITKISLEALCEYYGIEVDGEAHRALPDVISLSLILQRL
Subjt:  QFVKSRQKPGGYVLLVAHNARTFDVPFLLHEFSRYSIDIPQDWLFLDTMTLARQLMKLSDSKITKISLEALCEYYGIEVDGEAHRALPDVISLSLILQRL

Query:  TFDLKLDVSDLVERAFTPLDLINKKKK
        TFDLKLDVSDLVERAFTPLDLINKKKK
Subjt:  TFDLKLDVSDLVERAFTPLDLINKKKK

XP_022968752.1 exonuclease DPD1, chloroplastic/mitochondrial [Cucurbita maxima]6.54e-18078.29Show/hide
Query:  MCFSIFRFPKFGVPILANLWRENFHPLNRNHGHSCWYDQLCFRIYNLEGGQNKRWTRKSITTKAGGKAKTNPSSKPTNITNEILQESMSASCTVNVNKSE
        MCFSI R PKFGVP LANLWRENFHPLNRN+GHS WYDQL FRIYNLEGGQ+KRWTRKS+TTKAG KAKTNPSSKP+NI NEIL+ES+S SCTV++NKSE
Subjt:  MCFSIFRFPKFGVPILANLWRENFHPLNRNHGHSCWYDQLCFRIYNLEGGQNKRWTRKSITTKAGGKAKTNPSSKPTNITNEILQESMSASCTVNVNKSE

Query:  KSGTQKLQYCDIQPTIIKSKEFIHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLIDPQCYITNSSIHGITNNMVASCGVPRMQELIPIIL
        K GTQKLQ C+IQ TIIK KE   PVTVITFDIETTGFSR LDRIVEIA QDLSGGENSTFQTLI+P+CYI N+ +HGIT+ MV+   VPRM+ELIPI+L
Subjt:  KSGTQKLQYCDIQPTIIKSKEFIHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLIDPQCYITNSSIHGITNNMVASCGVPRMQELIPIIL

Query:  QFVKSRQKPGGYVLLVAHNARTFDVPFLLHEFSRYSIDIPQDWLFLDTMTLARQLMKLSDSKITKISLEALCEYYGIEVDGEAHRALPDVISLSLILQRL
        QFVKSRQKP GYVLLVAHNAR FDVPFLL EFSR S+DIP +WLF D + LARQLMK +DSKITKISL+AL EYY I + G AHRA+ DV +LSLILQRL
Subjt:  QFVKSRQKPGGYVLLVAHNARTFDVPFLLHEFSRYSIDIPQDWLFLDTMTLARQLMKLSDSKITKISLEALCEYYGIEVDGEAHRALPDVISLSLILQRL

Query:  TFDLKLDVSDLVERAFTPLDLINKKKK
        TFDLKL + DL+ER+FT  DLINKKKK
Subjt:  TFDLKLDVSDLVERAFTPLDLINKKKK

XP_038878496.1 exonuclease DPD1, chloroplastic/mitochondrial isoform X1 [Benincasa hispida]5.77e-17978.96Show/hide
Query:  MCFSIFRFPKFGVPILANLWRENFHPLNRNHGHSCWYDQLCFRIYNLEGGQNKRWTRKSITTKAGGKAKTNPSSKPTNITNEILQESMSASCTVNVNKSE
        MCFSI RFPKFGVP LANLWRENFHPLNRN  HS W+DQL FRIYNLEGGQNKRW RKS+TTKAG KAK NPSSKPTNI NEIL+ES+S SCTV++NKSE
Subjt:  MCFSIFRFPKFGVPILANLWRENFHPLNRNHGHSCWYDQLCFRIYNLEGGQNKRWTRKSITTKAGGKAKTNPSSKPTNITNEILQESMSASCTVNVNKSE

Query:  KSGTQKLQYCDIQPTIIKSKEFIHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLIDPQCYITNSSIHGITNNMVASCGVPRMQELIPIIL
        KS TQKLQYCDIQ  IIK+KE   PVTVITFDIETTGFSRNLDRIVEIA QDLSGGENSTFQTLI+P+CYI NS +HGITN+MV+   VPRM+ELIPI+L
Subjt:  KSGTQKLQYCDIQPTIIKSKEFIHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLIDPQCYITNSSIHGITNNMVASCGVPRMQELIPIIL

Query:  QFVKSRQK--PGGYVLLVAHNARTFDVPFLLHEFSRYSIDIPQDWLFLDTMTLARQLMKLSDSKITKISLEALCEYYGIEVDGEAHRALPDVISLSLILQ
        QFV+SRQK  P GYVLLVAHNARTFDVPFLL EFSR S DIP +W F D++ LARQLMK SDSKITKISL+AL EYY I++ G AHRA+ DV SLSLILQ
Subjt:  QFVKSRQK--PGGYVLLVAHNARTFDVPFLLHEFSRYSIDIPQDWLFLDTMTLARQLMKLSDSKITKISLEALCEYYGIEVDGEAHRALPDVISLSLILQ

Query:  RLTFDLKLDVSDLVERAFTPLDLINKKK
        RLTF+LKL +SDL+ER+FT  DLINKKK
Subjt:  RLTFDLKLDVSDLVERAFTPLDLINKKK

TrEMBL top hitse value%identityAlignment
A0A0A0LVY3 Exonuclease domain-containing protein1.6e-16489.3Show/hide
Query:  MCFSIFRFPKFGVPILANLWRENFHPLNRNHGHSCWYDQLCFRIYNLEGGQNKRWTRKSITTKAGGKAKTNPSSKPTNITNEILQESMSASCTVNVNKSE
        MC SIFRFPK+GVP+LANLWRENFHPLNRNHGH+CWYDQLCFRIYNLEGG+NKRWTRKSITTKAG KAKTNPSSKPTNI NEILQESM ASCTVN+NKSE
Subjt:  MCFSIFRFPKFGVPILANLWRENFHPLNRNHGHSCWYDQLCFRIYNLEGGQNKRWTRKSITTKAGGKAKTNPSSKPTNITNEILQESMSASCTVNVNKSE

Query:  KSGTQKLQYCDIQPTIIKSKEFIHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLIDPQCYITNSSIHGITNNMVASCGVPRMQELIPIIL
        KS TQKLQYCDIQPTIIKSKEF H VTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLI+PQCYITNS+IHGI+N MV S  VPRMQELIPIIL
Subjt:  KSGTQKLQYCDIQPTIIKSKEFIHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLIDPQCYITNSSIHGITNNMVASCGVPRMQELIPIIL

Query:  QFVKSRQKPGGYVLLVAHNARTFDVPFLLHEFSRYSIDIPQDWLFLDTMTLARQLMKLSDSKITKISLEALCEYYGIEVDGEAHRALPDVISLSLILQRL
        QFVKSRQKPGGYVLLVAHNARTFDVPFLL EFSRYS+DIP +WLF DTMTLARQLMKLSDSKITKI+L+AL EYYGI++DG+AHRAL DV  LS ILQRL
Subjt:  QFVKSRQKPGGYVLLVAHNARTFDVPFLLHEFSRYSIDIPQDWLFLDTMTLARQLMKLSDSKITKISLEALCEYYGIEVDGEAHRALPDVISLSLILQRL

Query:  TFDLKLDVSDLVERAFTPLDLINKKKK
        TFDLKLD+SDLVERAFTPLDLINKKKK
Subjt:  TFDLKLDVSDLVERAFTPLDLINKKKK

A0A0N9LRH7 Exonuclease DPD12.4e-16388.69Show/hide
Query:  MCFSIFRFPKFGVPILANLWRENFHPLNRNHGHSCWYDQLCFRIYNLEGGQNKRWTRKSITTKAGGKAKTNPSSKPTNITNEILQESMSASCTVNVNKSE
        MC SIFRFPK+GVP+LANLWRENFHPLNRNHGH+CWYDQLCFRIYNLEGG+NKRWTRKSITTKAG KAKTNPSSKPTNI NEILQES+ ASCTVN+NKSE
Subjt:  MCFSIFRFPKFGVPILANLWRENFHPLNRNHGHSCWYDQLCFRIYNLEGGQNKRWTRKSITTKAGGKAKTNPSSKPTNITNEILQESMSASCTVNVNKSE

Query:  KSGTQKLQYCDIQPTIIKSKEFIHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLIDPQCYITNSSIHGITNNMVASCGVPRMQELIPIIL
        KS TQKLQYCDIQPTIIKSKEF H VTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLI+PQCYITNS+IHGI+N MV S  VP MQELIPIIL
Subjt:  KSGTQKLQYCDIQPTIIKSKEFIHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLIDPQCYITNSSIHGITNNMVASCGVPRMQELIPIIL

Query:  QFVKSRQKPGGYVLLVAHNARTFDVPFLLHEFSRYSIDIPQDWLFLDTMTLARQLMKLSDSKITKISLEALCEYYGIEVDGEAHRALPDVISLSLILQRL
        QFVKSRQKPGGYVLLVAHNARTFDVPFLL EFSRYS+DIP +WLF DTMTLARQLMKLSDSKITKI+L+AL EYYGI++DG+AHRAL DV  LS ILQRL
Subjt:  QFVKSRQKPGGYVLLVAHNARTFDVPFLLHEFSRYSIDIPQDWLFLDTMTLARQLMKLSDSKITKISLEALCEYYGIEVDGEAHRALPDVISLSLILQRL

Query:  TFDLKLDVSDLVERAFTPLDLINKKKK
        TFDLKLD+SDLVERAFTPLDLINKKKK
Subjt:  TFDLKLDVSDLVERAFTPLDLINKKKK

A0A1S4DY73 exonuclease DPD1, chloroplastic/mitochondrial4.4e-186100Show/hide
Query:  MCFSIFRFPKFGVPILANLWRENFHPLNRNHGHSCWYDQLCFRIYNLEGGQNKRWTRKSITTKAGGKAKTNPSSKPTNITNEILQESMSASCTVNVNKSE
        MCFSIFRFPKFGVPILANLWRENFHPLNRNHGHSCWYDQLCFRIYNLEGGQNKRWTRKSITTKAGGKAKTNPSSKPTNITNEILQESMSASCTVNVNKSE
Subjt:  MCFSIFRFPKFGVPILANLWRENFHPLNRNHGHSCWYDQLCFRIYNLEGGQNKRWTRKSITTKAGGKAKTNPSSKPTNITNEILQESMSASCTVNVNKSE

Query:  KSGTQKLQYCDIQPTIIKSKEFIHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLIDPQCYITNSSIHGITNNMVASCGVPRMQELIPIIL
        KSGTQKLQYCDIQPTIIKSKEFIHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLIDPQCYITNSSIHGITNNMVASCGVPRMQELIPIIL
Subjt:  KSGTQKLQYCDIQPTIIKSKEFIHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLIDPQCYITNSSIHGITNNMVASCGVPRMQELIPIIL

Query:  QFVKSRQKPGGYVLLVAHNARTFDVPFLLHEFSRYSIDIPQDWLFLDTMTLARQLMKLSDSKITKISLEALCEYYGIEVDGEAHRALPDVISLSLILQRL
        QFVKSRQKPGGYVLLVAHNARTFDVPFLLHEFSRYSIDIPQDWLFLDTMTLARQLMKLSDSKITKISLEALCEYYGIEVDGEAHRALPDVISLSLILQRL
Subjt:  QFVKSRQKPGGYVLLVAHNARTFDVPFLLHEFSRYSIDIPQDWLFLDTMTLARQLMKLSDSKITKISLEALCEYYGIEVDGEAHRALPDVISLSLILQRL

Query:  TFDLKLDVSDLVERAFTPLDLINKKKK
        TFDLKLDVSDLVERAFTPLDLINKKKK
Subjt:  TFDLKLDVSDLVERAFTPLDLINKKKK

A0A6J1HDU6 exonuclease DPD1, chloroplastic/mitochondrial6.3e-14076.99Show/hide
Query:  MCFSIFRFPKFGVPILANLWRENFHPLNRNHGHSCWYDQLCFRIYNLEGGQNKRWTRKSITTKAGGKAKTNPSSKPTNITNEILQESMSASCTVNVNKSE
        MCFSI R PKFGVP LANLWRENFHPLNRN+GHS WYDQL FR YNLEGGQ+KRWTRKS++TKAG KAKT+PSSKP+NI NEIL+ES+S SCTV++NKSE
Subjt:  MCFSIFRFPKFGVPILANLWRENFHPLNRNHGHSCWYDQLCFRIYNLEGGQNKRWTRKSITTKAGGKAKTNPSSKPTNITNEILQESMSASCTVNVNKSE

Query:  KSGTQKLQYCDIQPTIIKSKEFIHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLIDPQCYITNSSIHGITNNMVASCGVPRMQELIPIIL
        K+GTQKLQ C+IQ TI+K KE   PVTVITFDIETTGFSR LDRIVEIA QDLSGGENSTFQTLI+P+CYI N+ +HGIT+ MV+   VPRM+ELIPI+L
Subjt:  KSGTQKLQYCDIQPTIIKSKEFIHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLIDPQCYITNSSIHGITNNMVASCGVPRMQELIPIIL

Query:  QFVKSRQKPGGYVLLVAHNARTFDVPFLLHEFSRYSIDIPQDWLFLDTMTLARQLMKLSDSKITKISLEALCEYYGIEVDGEAHRALPDVISLSLILQRL
        QF+KSRQKP GYVLLVAHNARTFDVPFLL EFSR S+DIP +WLF D + LARQLMK +DSKITKISL+AL EYY I + G AHRA+ DV +LSLILQRL
Subjt:  QFVKSRQKPGGYVLLVAHNARTFDVPFLLHEFSRYSIDIPQDWLFLDTMTLARQLMKLSDSKITKISLEALCEYYGIEVDGEAHRALPDVISLSLILQRL

Query:  TFDLKLDVSDLVERAFTPLDLINKKK
        TFDLKL + DL+ER+FT  DLINKKK
Subjt:  TFDLKLDVSDLVERAFTPLDLINKKK

A0A6J1HUD7 exonuclease DPD1, chloroplastic/mitochondrial3.3e-14178.29Show/hide
Query:  MCFSIFRFPKFGVPILANLWRENFHPLNRNHGHSCWYDQLCFRIYNLEGGQNKRWTRKSITTKAGGKAKTNPSSKPTNITNEILQESMSASCTVNVNKSE
        MCFSI R PKFGVP LANLWRENFHPLNRN+GHS WYDQL FRIYNLEGGQ+KRWTRKS+TTKAG KAKTNPSSKP+NI NEIL+ES+S SCTV++NKSE
Subjt:  MCFSIFRFPKFGVPILANLWRENFHPLNRNHGHSCWYDQLCFRIYNLEGGQNKRWTRKSITTKAGGKAKTNPSSKPTNITNEILQESMSASCTVNVNKSE

Query:  KSGTQKLQYCDIQPTIIKSKEFIHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLIDPQCYITNSSIHGITNNMVASCGVPRMQELIPIIL
        K GTQKLQ C+IQ TIIK KE   PVTVITFDIETTGFSR LDRIVEIA QDLSGGENSTFQTLI+P+CYI N+ +HGIT+ MV+   VPRM+ELIPI+L
Subjt:  KSGTQKLQYCDIQPTIIKSKEFIHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLIDPQCYITNSSIHGITNNMVASCGVPRMQELIPIIL

Query:  QFVKSRQKPGGYVLLVAHNARTFDVPFLLHEFSRYSIDIPQDWLFLDTMTLARQLMKLSDSKITKISLEALCEYYGIEVDGEAHRALPDVISLSLILQRL
        QFVKSRQKP GYVLLVAHNAR FDVPFLL EFSR S+DIP +WLF D + LARQLMK +DSKITKISL+AL EYY I + G AHRA+ DV +LSLILQRL
Subjt:  QFVKSRQKPGGYVLLVAHNARTFDVPFLLHEFSRYSIDIPQDWLFLDTMTLARQLMKLSDSKITKISLEALCEYYGIEVDGEAHRALPDVISLSLILQRL

Query:  TFDLKLDVSDLVERAFTPLDLINKKKK
        TFDLKL + DL+ER+FT  DLINKKKK
Subjt:  TFDLKLDVSDLVERAFTPLDLINKKKK

SwissProt top hitse value%identityAlignment
Q682U6 Exonuclease DPD1, chloroplastic/mitochondrial1.7e-5741.49Show/hide
Query:  MCFSIFRFPKFGVPILANLWRENFHPLNRNHGHSCWYDQLCFRIYNLEGGQNKRWTRKSITTKAGGKAKTNPSSKPTNITNEILQESMSASCTVNVNKSE
        MC SI +  +  +    +   E  H   +N   S     L  R  +++G    RW R++++T   G      SS             +  +  V     E
Subjt:  MCFSIFRFPKFGVPILANLWRENFHPLNRNHGHSCWYDQLCFRIYNLEGGQNKRWTRKSITTKAGGKAKTNPSSKPTNITNEILQESMSASCTVNVNKSE

Query:  KSGTQKLQYCDIQPTIIKSKEFIHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLIDPQCY-ITNSSIHGITNNMVASCGVPRMQELIPII
        +S T+   + ++Q  + + K+    +TVI  D+ETTG  R  +RI+EIA QD++GG  STFQTL++P    ITN+ IHGI N+MV    VPRM+ELIPI 
Subjt:  KSGTQKLQYCDIQPTIIKSKEFIHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLIDPQCY-ITNSSIHGITNNMVASCGVPRMQELIPII

Query:  LQFVKSRQKPGGYVLLVAHNARTFDVPFLLHEFSRYSIDIPQDWLFLDTMTLARQLMKLSDSKI-TKISLEALCEYYGIEVDGEAHRALPDVISLSLILQ
        L++V+SRQKPGGYV+LVAHN ++FD  FL++EF+R S +IP +WL LD++ LAR+ MK  +  +    SLEAL +YY +  +G+AHRAL DV+ LS + Q
Subjt:  LQFVKSRQKPGGYVLLVAHNARTFDVPFLLHEFSRYSIDIPQDWLFLDTMTLARQLMKLSDSKI-TKISLEALCEYYGIEVDGEAHRALPDVISLSLILQ

Query:  RLTFDLKLDVSDLVERAFTPLDL
        +LT DLKL +SDLV R  T  D+
Subjt:  RLTFDLKLDVSDLVERAFTPLDL

Q895K2 DNA polymerase III PolC-type5.0e-0930Show/hide
Query:  ITFDIETTGFSRNLDRIVEIAFQDLSGGE-NSTFQTLIDPQCYITNSSIH--GITNNMVASCGVPRMQELIPIILQFVKSRQKPGGYVLLVAHNARTFDV
        + FDIETTGFS   D+I+EI    +  G+    + T ++P+  I    I   GI + MV     P+++E++P  + F++         +LVAHNA  FDV
Subjt:  ITFDIETTGFSRNLDRIVEIAFQDLSGGE-NSTFQTLIDPQCYITNSSIH--GITNNMVASCGVPRMQELIPIILQFVKSRQKPGGYVLLVAHNARTFDV

Query:  PFLLHEFSRYSIDIPQDWLFLDTMTLARQLMKLSDSKITKISLEALCEYYGIEVDGEAHRALPDVISLSLILQRLTFDLK
         F+      + I        LDT+ L + L      ++ +  L  + ++ GI +    HRA+ D  +   IL +   DLK
Subjt:  PFLLHEFSRYSIDIPQDWLFLDTMTLARQLMKLSDSKITKISLEALCEYYGIEVDGEAHRALPDVISLSLILQRLTFDLK

Q8EQU6 DNA polymerase III PolC-type1.0e-0931.07Show/hide
Query:  TVITFDIETTGFSRNLDRIVEIAFQDLSGGE-NSTFQTLIDPQCYITNSSIH--GITNNMVASCGVPRMQELIPIILQFVKSRQKPGGYVLLVAHNARTF
        T + FD+ETTG S   D I+E+A   + GGE    F++  +P   ++ ++I   GIT++MV            P +   +K      G  +LVAHNA +F
Subjt:  TVITFDIETTGFSRNLDRIVEIAFQDLSGGE-NSTFQTLIDPQCYITNSSIH--GITNNMVASCGVPRMQELIPIILQFVKSRQKPGGYVLLVAHNARTF

Query:  DVPFLLHEFSRYSIDIPQDWLFLDTMTLARQLMKLSDSKITKISLEALCEYYGIEVDGEAHRALPDVISLSLILQRL
        D+ FL   F R   +   + + +DT+ LAR L+     ++    L  LC++  IE+  + HRA+ D  +   +L +L
Subjt:  DVPFLLHEFSRYSIDIPQDWLFLDTMTLARQLMKLSDSKITKISLEALCEYYGIEVDGEAHRALPDVISLSLILQRL

Q8RA32 DNA polymerase III PolC-type7.6e-1031.1Show/hide
Query:  ITFDIETTGFSRNLDRIVEIAFQDLSGGE-NSTFQTLIDPQCYITN--SSIHGITNNMVASCGVPRMQELIPIILQFVKSRQKPGGYVLLVAHNARTFDV
        + FDIETTG S   D I+EI    +   +   TF+T ++PQ  I++  + + GI  +MV     P ++E++P  L+F K         +LVAHNA  FDV
Subjt:  ITFDIETTGFSRNLDRIVEIAFQDLSGGE-NSTFQTLIDPQCYITN--SSIHGITNNMVASCGVPRMQELIPIILQFVKSRQKPGGYVLLVAHNARTFDV

Query:  PFLLHEFSRYSIDIPQDWLFLDTMTLARQLMKLSDSKITKISLEALCEYYGIEVDGEAHRALPD
         F+  +  +  + +      LDT+ L+R L +     +    L+ L E++ +++    HRA+ D
Subjt:  PFLLHEFSRYSIDIPQDWLFLDTMTLARQLMKLSDSKITKISLEALCEYYGIEVDGEAHRALPD

Q8XJR3 DNA polymerase III PolC-type9.7e-1331.02Show/hide
Query:  PTIIKSKEFIHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGE-NSTFQTLIDPQCYITN--SSIHGITNNMVASCGVPRMQELIPIILQFVKSRQKPG
        P +I   E       + FDIETTGFS   D+I+EI    L  GE   +F T +DP+  I    + +  IT NMV   G P + E++P  ++FV       
Subjt:  PTIIKSKEFIHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGE-NSTFQTLIDPQCYITN--SSIHGITNNMVASCGVPRMQELIPIILQFVKSRQKPG

Query:  GYVLLVAHNARTFDVPFLLHEFSRYSIDIPQDWLFLDTMTLARQLMKLSDSKITKISLEALCEYYGIEVDGEAHRALPDVISLSLIL----QRLTFDLKL
        G  +LVAHNA  FDV F+          +      +DT+ LAR L       + K+ L  + ++ GI ++   HRA+ D  + + IL    +++  ++ +
Subjt:  GYVLLVAHNARTFDVPFLLHEFSRYSIDIPQDWLFLDTMTLARQLMKLSDSKITKISLEALCEYYGIEVDGEAHRALPDVISLSLIL----QRLTFDLKL

Query:  -DVSDLVERAFTPLDL
         DV  L E+  + +D+
Subjt:  -DVSDLVERAFTPLDL

Arabidopsis top hitse value%identityAlignment
AT5G26940.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.2e-5841.49Show/hide
Query:  MCFSIFRFPKFGVPILANLWRENFHPLNRNHGHSCWYDQLCFRIYNLEGGQNKRWTRKSITTKAGGKAKTNPSSKPTNITNEILQESMSASCTVNVNKSE
        MC SI +  +  +    +   E  H   +N   S     L  R  +++G    RW R++++T   G      SS             +  +  V     E
Subjt:  MCFSIFRFPKFGVPILANLWRENFHPLNRNHGHSCWYDQLCFRIYNLEGGQNKRWTRKSITTKAGGKAKTNPSSKPTNITNEILQESMSASCTVNVNKSE

Query:  KSGTQKLQYCDIQPTIIKSKEFIHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLIDPQCY-ITNSSIHGITNNMVASCGVPRMQELIPII
        +S T+   + ++Q  + + K+    +TVI  D+ETTG  R  +RI+EIA QD++GG  STFQTL++P    ITN+ IHGI N+MV    VPRM+ELIPI 
Subjt:  KSGTQKLQYCDIQPTIIKSKEFIHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLIDPQCY-ITNSSIHGITNNMVASCGVPRMQELIPII

Query:  LQFVKSRQKPGGYVLLVAHNARTFDVPFLLHEFSRYSIDIPQDWLFLDTMTLARQLMKLSDSKI-TKISLEALCEYYGIEVDGEAHRALPDVISLSLILQ
        L++V+SRQKPGGYV+LVAHN ++FD  FL++EF+R S +IP +WL LD++ LAR+ MK  +  +    SLEAL +YY +  +G+AHRAL DV+ LS + Q
Subjt:  LQFVKSRQKPGGYVLLVAHNARTFDVPFLLHEFSRYSIDIPQDWLFLDTMTLARQLMKLSDSKI-TKISLEALCEYYGIEVDGEAHRALPDVISLSLILQ

Query:  RLTFDLKLDVSDLVERAFTPLDL
        +LT DLKL +SDLV R  T  D+
Subjt:  RLTFDLKLDVSDLVERAFTPLDL

AT5G26940.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.2e-5841.49Show/hide
Query:  MCFSIFRFPKFGVPILANLWRENFHPLNRNHGHSCWYDQLCFRIYNLEGGQNKRWTRKSITTKAGGKAKTNPSSKPTNITNEILQESMSASCTVNVNKSE
        MC SI +  +  +    +   E  H   +N   S     L  R  +++G    RW R++++T   G      SS             +  +  V     E
Subjt:  MCFSIFRFPKFGVPILANLWRENFHPLNRNHGHSCWYDQLCFRIYNLEGGQNKRWTRKSITTKAGGKAKTNPSSKPTNITNEILQESMSASCTVNVNKSE

Query:  KSGTQKLQYCDIQPTIIKSKEFIHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLIDPQCY-ITNSSIHGITNNMVASCGVPRMQELIPII
        +S T+   + ++Q  + + K+    +TVI  D+ETTG  R  +RI+EIA QD++GG  STFQTL++P    ITN+ IHGI N+MV    VPRM+ELIPI 
Subjt:  KSGTQKLQYCDIQPTIIKSKEFIHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLIDPQCY-ITNSSIHGITNNMVASCGVPRMQELIPII

Query:  LQFVKSRQKPGGYVLLVAHNARTFDVPFLLHEFSRYSIDIPQDWLFLDTMTLARQLMKLSDSKI-TKISLEALCEYYGIEVDGEAHRALPDVISLSLILQ
        L++V+SRQKPGGYV+LVAHN ++FD  FL++EF+R S +IP +WL LD++ LAR+ MK  +  +    SLEAL +YY +  +G+AHRAL DV+ LS + Q
Subjt:  LQFVKSRQKPGGYVLLVAHNARTFDVPFLLHEFSRYSIDIPQDWLFLDTMTLARQLMKLSDSKI-TKISLEALCEYYGIEVDGEAHRALPDVISLSLILQ

Query:  RLTFDLKLDVSDLVERAFTPLDL
        +LT DLKL +SDLV R  T  D+
Subjt:  RLTFDLKLDVSDLVERAFTPLDL

AT5G26940.3 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.2e-5841.49Show/hide
Query:  MCFSIFRFPKFGVPILANLWRENFHPLNRNHGHSCWYDQLCFRIYNLEGGQNKRWTRKSITTKAGGKAKTNPSSKPTNITNEILQESMSASCTVNVNKSE
        MC SI +  +  +    +   E  H   +N   S     L  R  +++G    RW R++++T   G      SS             +  +  V     E
Subjt:  MCFSIFRFPKFGVPILANLWRENFHPLNRNHGHSCWYDQLCFRIYNLEGGQNKRWTRKSITTKAGGKAKTNPSSKPTNITNEILQESMSASCTVNVNKSE

Query:  KSGTQKLQYCDIQPTIIKSKEFIHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLIDPQCY-ITNSSIHGITNNMVASCGVPRMQELIPII
        +S T+   + ++Q  + + K+    +TVI  D+ETTG  R  +RI+EIA QD++GG  STFQTL++P    ITN+ IHGI N+MV    VPRM+ELIPI 
Subjt:  KSGTQKLQYCDIQPTIIKSKEFIHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLIDPQCY-ITNSSIHGITNNMVASCGVPRMQELIPII

Query:  LQFVKSRQKPGGYVLLVAHNARTFDVPFLLHEFSRYSIDIPQDWLFLDTMTLARQLMKLSDSKI-TKISLEALCEYYGIEVDGEAHRALPDVISLSLILQ
        L++V+SRQKPGGYV+LVAHN ++FD  FL++EF+R S +IP +WL LD++ LAR+ MK  +  +    SLEAL +YY +  +G+AHRAL DV+ LS + Q
Subjt:  LQFVKSRQKPGGYVLLVAHNARTFDVPFLLHEFSRYSIDIPQDWLFLDTMTLARQLMKLSDSKI-TKISLEALCEYYGIEVDGEAHRALPDVISLSLILQ

Query:  RLTFDLKLDVSDLVERAFTPLDL
        +LT DLKL +SDLV R  T  D+
Subjt:  RLTFDLKLDVSDLVERAFTPLDL

AT5G26940.4 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.2e-5841.49Show/hide
Query:  MCFSIFRFPKFGVPILANLWRENFHPLNRNHGHSCWYDQLCFRIYNLEGGQNKRWTRKSITTKAGGKAKTNPSSKPTNITNEILQESMSASCTVNVNKSE
        MC SI +  +  +    +   E  H   +N   S     L  R  +++G    RW R++++T   G      SS             +  +  V     E
Subjt:  MCFSIFRFPKFGVPILANLWRENFHPLNRNHGHSCWYDQLCFRIYNLEGGQNKRWTRKSITTKAGGKAKTNPSSKPTNITNEILQESMSASCTVNVNKSE

Query:  KSGTQKLQYCDIQPTIIKSKEFIHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLIDPQCY-ITNSSIHGITNNMVASCGVPRMQELIPII
        +S T+   + ++Q  + + K+    +TVI  D+ETTG  R  +RI+EIA QD++GG  STFQTL++P    ITN+ IHGI N+MV    VPRM+ELIPI 
Subjt:  KSGTQKLQYCDIQPTIIKSKEFIHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLIDPQCY-ITNSSIHGITNNMVASCGVPRMQELIPII

Query:  LQFVKSRQKPGGYVLLVAHNARTFDVPFLLHEFSRYSIDIPQDWLFLDTMTLARQLMKLSDSKI-TKISLEALCEYYGIEVDGEAHRALPDVISLSLILQ
        L++V+SRQKPGGYV+LVAHN ++FD  FL++EF+R S +IP +WL LD++ LAR+ MK  +  +    SLEAL +YY +  +G+AHRAL DV+ LS + Q
Subjt:  LQFVKSRQKPGGYVLLVAHNARTFDVPFLLHEFSRYSIDIPQDWLFLDTMTLARQLMKLSDSKI-TKISLEALCEYYGIEVDGEAHRALPDVISLSLILQ

Query:  RLTFDLKLDVSDLVERAFTPLDL
        +LT DLKL +SDLV R  T  D+
Subjt:  RLTFDLKLDVSDLVERAFTPLDL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCTTTTCAATCTTCCGATTTCCAAAATTTGGAGTCCCTATTTTAGCTAACCTTTGGAGGGAAAACTTTCATCCCTTGAACAGAAATCATGGTCATAGTTGTTGGTA
TGATCAACTTTGTTTTAGGATCTATAACCTTGAAGGAGGACAGAACAAGAGATGGACCAGAAAATCTATAACTACCAAAGCGGGGGGGAAAGCAAAGACCAACCCTAGCA
GTAAACCCACCAATATTACGAATGAAATCTTGCAGGAATCGATGTCAGCAAGCTGTACAGTTAACGTTAATAAGTCTGAGAAAAGTGGAACTCAGAAGCTTCAATATTGT
GATATTCAACCAACAATTATTAAGAGCAAGGAATTCATTCACCCGGTGACAGTTATAACCTTTGACATTGAAACGACAGGTTTTAGTAGAAACCTCGATAGAATAGTGGA
AATTGCATTTCAAGATCTTTCAGGAGGAGAAAATAGCACCTTTCAAACATTAATAGATCCGCAGTGCTATATTACAAATTCAAGCATACATGGCATTACAAACAATATGG
TCGCTAGTTGCGGTGTTCCAAGGATGCAGGAACTTATTCCAATTATATTACAATTTGTCAAAAGCCGTCAGAAACCCGGTGGTTATGTATTATTGGTAGCTCATAATGCT
CGTACCTTCGATGTACCCTTTTTACTCCACGAATTCAGCCGTTACTCCATTGATATTCCTCAAGATTGGCTATTTCTCGATACTATGACGTTAGCCCGTCAACTGATGAA
GTTATCCGATTCGAAGATTACGAAAATATCATTAGAAGCACTTTGTGAGTATTACGGTATAGAAGTGGACGGTGAAGCACATCGAGCATTGCCAGATGTGATATCATTGT
CTTTGATTCTTCAGAGGCTTACTTTCGACCTCAAGCTAGATGTCTCGGATCTCGTTGAAAGAGCTTTCACTCCTTTAGATCTGATTAATAAGAAGAAAAAATAG
mRNA sequenceShow/hide mRNA sequence
ATTTAACATAGCAAAAAATATTTTTAATAATGGAAGATTATTTAAAACTATATCAAATCGAATAAAATATATATGTAGTAATTTAACTTAAAGAAAAAGATTAGATTAAT
TTTAAATTAGGAAGGAAAATATAAAAAAGAAAAGAAAGGATCCGTAAGTTTAGCTTTGACTTATTTTTTTATTAATTTTTTCGGAAGAATAATTACAGAAGAAGCAACGA
AGCTAAAGATCTCAGAAGCTGTTTTTTTCTTCTCTTCCGACCACAATGTCTCCCAAGAGCACCTCTCCATCTTCTTCCACGCCATTTACTCCCCTTCTTTTCCTCGCTTA
ACTTACGTTATTCCTTTGCTTTCGTTTTTAAATGCACCATATTCCTCCCTCAGGTTTTATTTCAGGTTGAAGAAAATTGCTTTCGGTGCTGGATTTTGTTGGGTTTTCTG
TCTAGATTTCCTCTTGTTGTGTTGTAAATTTAAATTTTAGCAGCTCCAATGTGCTTTTCAATCTTCCGATTTCCAAAATTTGGAGTCCCTATTTTAGCTAACCTTTGGAG
GGAAAACTTTCATCCCTTGAACAGAAATCATGGTCATAGTTGTTGGTATGATCAACTTTGTTTTAGGATCTATAACCTTGAAGGAGGACAGAACAAGAGATGGACCAGAA
AATCTATAACTACCAAAGCGGGGGGGAAAGCAAAGACCAACCCTAGCAGTAAACCCACCAATATTACGAATGAAATCTTGCAGGAATCGATGTCAGCAAGCTGTACAGTT
AACGTTAATAAGTCTGAGAAAAGTGGAACTCAGAAGCTTCAATATTGTGATATTCAACCAACAATTATTAAGAGCAAGGAATTCATTCACCCGGTGACAGTTATAACCTT
TGACATTGAAACGACAGGTTTTAGTAGAAACCTCGATAGAATAGTGGAAATTGCATTTCAAGATCTTTCAGGAGGAGAAAATAGCACCTTTCAAACATTAATAGATCCGC
AGTGCTATATTACAAATTCAAGCATACATGGCATTACAAACAATATGGTCGCTAGTTGCGGTGTTCCAAGGATGCAGGAACTTATTCCAATTATATTACAATTTGTCAAA
AGCCGTCAGAAACCCGGTGGTTATGTATTATTGGTAGCTCATAATGCTCGTACCTTCGATGTACCCTTTTTACTCCACGAATTCAGCCGTTACTCCATTGATATTCCTCA
AGATTGGCTATTTCTCGATACTATGACGTTAGCCCGTCAACTGATGAAGTTATCCGATTCGAAGATTACGAAAATATCATTAGAAGCACTTTGTGAGTATTACGGTATAG
AAGTGGACGGTGAAGCACATCGAGCATTGCCAGATGTGATATCATTGTCTTTGATTCTTCAGAGGCTTACTTTCGACCTCAAGCTAGATGTCTCGGATCTCGTTGAAAGA
GCTTTCACTCCTTTAGATCTGATTAATAAGAAGAAAAAATAGAGTGATGAAGCTATGTTTTTGTTGTAATGTTCTTTACTAATTGTTGCAACTTTCTATTCATTCTTATT
TGAATAACTTTGGGTCATTTTATTTACGGTCATCAGATCCTTCTTGATGTCCATATTCTCCAAAA
Protein sequenceShow/hide protein sequence
MCFSIFRFPKFGVPILANLWRENFHPLNRNHGHSCWYDQLCFRIYNLEGGQNKRWTRKSITTKAGGKAKTNPSSKPTNITNEILQESMSASCTVNVNKSEKSGTQKLQYC
DIQPTIIKSKEFIHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLIDPQCYITNSSIHGITNNMVASCGVPRMQELIPIILQFVKSRQKPGGYVLLVAHNA
RTFDVPFLLHEFSRYSIDIPQDWLFLDTMTLARQLMKLSDSKITKISLEALCEYYGIEVDGEAHRALPDVISLSLILQRLTFDLKLDVSDLVERAFTPLDLINKKKK