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IVF0000319 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0000319
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description50S ribosomal protein L15
Genome locationchr12:17501977..17502243
RNA-Seq ExpressionIVF0000319
SyntenyIVF0000319
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0015934 - large ribosomal subunit (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025306.1 hypothetical protein E6C27_scaffold541G001610 [Cucumis melo var. makuwa]1.26e-3980.43Show/hide
Query:  MVGGGRSCGWRLKMTTGWRPKMTTGWRRKKASLEAN----GGGTRRRAEEGVLENGKAEEVRKSWRIYWRGRKSRRRMEEEKFAPGLFLKQG
        +VGGGRSCGW        RPKMTTGWR+KKASLEA     GGG RRRAEEGVLENGKAEE RKSWRIYWRGRKSRRRMEEEKFAPG FLKQG
Subjt:  MVGGGRSCGWRLKMTTGWRPKMTTGWRRKKASLEAN----GGGTRRRAEEGVLENGKAEEVRKSWRIYWRGRKSRRRMEEEKFAPGLFLKQG

KAA0034559.1 50S ribosomal protein L15 [Cucumis melo var. makuwa]8.86e-2587.3Show/hide
Query:  WRRKKASLEANGGGTRRRAEEGVLENGKAEEVRKSWRIYWRGRKSRRRMEEEKFAPGLFLKQG
        WRR KAS      G RRRAEEGVLENGKAEEVRKSWRIYWRGRKSRRRMEEEKFAPGLFLKQG
Subjt:  WRRKKASLEANGGGTRRRAEEGVLENGKAEEVRKSWRIYWRGRKSRRRMEEEKFAPGLFLKQG

KAA0046136.1 hypothetical protein E6C27_scaffold157G00760 [Cucumis melo var. makuwa]1.56e-1369.35Show/hide
Query:  MTTGWRRKKASLEANGGGTRRRAEEGVL--ENGKAEEVRKSWRIYWRGRKSRRRMEEEKFAP
        MTTGWR+KK  LEA         EEGVL  ENGK E+ RKSWRIYWRGRKSRR MEEEKF P
Subjt:  MTTGWRRKKASLEANGGGTRRRAEEGVL--ENGKAEEVRKSWRIYWRGRKSRRRMEEEKFAP

KAA0047052.1 hypothetical protein E6C27_scaffold466G00040 [Cucumis melo var. makuwa]5.99e-2390.57Show/hide
Query:  MVGGGRSCGWRLKMTTGWRPKMTTGWRRKKASLEAN----GGGTRRRAEEGVL
        MVGGGRSCGWRLKMTTGWRPKMTTGWRRKKASLEAN    GGGTRRRAEEGV+
Subjt:  MVGGGRSCGWRLKMTTGWRPKMTTGWRRKKASLEAN----GGGTRRRAEEGVL

KAA0063229.1 lon protease 2-like [Cucumis melo var. makuwa]6.57e-2061.05Show/hide
Query:  MTTGWRPKMTT--------------GWRRKKASLEAN----GGGTRRRAEEGVL--ENGKAEEVRKSWRIYWRGRKSRRRMEEEKFAPGLFLKQG
        M TGWR K  +               WRRKK  LEA     GGG RRRA+EGVL  ENGK EE RKSWRIYWRGRKSRR MEEEKFA   FLKQG
Subjt:  MTTGWRPKMTT--------------GWRRKKASLEAN----GGGTRRRAEEGVL--ENGKAEEVRKSWRIYWRGRKSRRRMEEEKFAPGLFLKQG

TrEMBL top hitse value%identityAlignment
A0A5A7SHI4 Uncharacterized protein4.1e-3080.43Show/hide
Query:  MVGGGRSCGWRLKMTTGWRPKMTTGWRRKKASLEAN----GGGTRRRAEEGVLENGKAEEVRKSWRIYWRGRKSRRRMEEEKFAPGLFLKQG
        +VGGGRSC        GWRPKMTTGWR+KKASLEA     GGG RRRAEEGVLENGKAEE RKSWRIYWRGRKSRRRMEEEKFAPG FLKQG
Subjt:  MVGGGRSCGWRLKMTTGWRPKMTTGWRRKKASLEAN----GGGTRRRAEEGVLENGKAEEVRKSWRIYWRGRKSRRRMEEEKFAPGLFLKQG

A0A5A7TUB6 Uncharacterized protein2.4e-1790.57Show/hide
Query:  MVGGGRSCGWRLKMTTGWRPKMTTGWRRKKASLEAN----GGGTRRRAEEGVL
        MVGGGRSCGWRLKMTTGWRPKMTTGWRRKKASLEAN    GGGTRRRAEEGV+
Subjt:  MVGGGRSCGWRLKMTTGWRPKMTTGWRRKKASLEAN----GGGTRRRAEEGVL

A0A5A7TVG1 Uncharacterized protein1.6e-1069.35Show/hide
Query:  MTTGWRRKKASLEANGGGTRRRAEEGVL--ENGKAEEVRKSWRIYWRGRKSRRRMEEEKFAP
        MTTGWR+KK  LE         AEEGVL  ENGK E+ RKSWRIYWRGRKSRR MEEEKF P
Subjt:  MTTGWRRKKASLEANGGGTRRRAEEGVL--ENGKAEEVRKSWRIYWRGRKSRRRMEEEKFAP

A0A5D3CCS9 50S ribosomal protein L151.1e-1987.3Show/hide
Query:  WRRKKASLEANGGGTRRRAEEGVLENGKAEEVRKSWRIYWRGRKSRRRMEEEKFAPGLFLKQG
        WRR KAS      G RRRAEEGVLENGKAEEVRKSWRIYWRGRKSRRRMEEEKFAPGLFLKQG
Subjt:  WRRKKASLEANGGGTRRRAEEGVLENGKAEEVRKSWRIYWRGRKSRRRMEEEKFAPGLFLKQG

A0A5D3CTI7 Lon protease 2-like7.6e-1661.05Show/hide
Query:  MTTGWRPKMTT--------------GWRRKKASLEAN----GGGTRRRAEEGVL--ENGKAEEVRKSWRIYWRGRKSRRRMEEEKFAPGLFLKQG
        M TGWR K  +               WRRKK  LEA     GGG RRRA+EGVL  ENGK EE RKSWRIYWRGRKSRR MEEEKFA   FLKQG
Subjt:  MTTGWRPKMTT--------------GWRRKKASLEAN----GGGTRRRAEEGVL--ENGKAEEVRKSWRIYWRGRKSRRRMEEEKFAPGLFLKQG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGGAGGCGGAAGAAGTTGTGGTTGGAGACTGAAGATGACGACTGGTTGGAGACCGAAGATGACGACTGGTTGGAGGCGGAAGAAGGCGTCGTTGGAGGCGAATGG
AGGCGGAACAAGGCGTCGTGCGGAAGAAGGCGTTCTTGAGAATGGTAAGGCGGAAGAAGTGAGAAAATCGTGGAGAATATATTGGAGAGGGAGAAAATCACGCAGACGAA
TGGAGGAGGAGAAATTCGCGCCAGGATTGTTTTTAAAACAAGGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGGAGGCGGAAGAAGTTGTGGTTGGAGACTGAAGATGACGACTGGTTGGAGACCGAAGATGACGACTGGTTGGAGGCGGAAGAAGGCGTCGTTGGAGGCGAATGG
AGGCGGAACAAGGCGTCGTGCGGAAGAAGGCGTTCTTGAGAATGGTAAGGCGGAAGAAGTGAGAAAATCGTGGAGAATATATTGGAGAGGGAGAAAATCACGCAGACGAA
TGGAGGAGGAGAAATTCGCGCCAGGATTGTTTTTAAAACAAGGGTAA
Protein sequenceShow/hide protein sequence
MVGGGRSCGWRLKMTTGWRPKMTTGWRRKKASLEANGGGTRRRAEEGVLENGKAEEVRKSWRIYWRGRKSRRRMEEEKFAPGLFLKQG