; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0000331 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0000331
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionNiemann-Pick C1 protein-like
Genome locationchr11:14779118..14781217
RNA-Seq ExpressionIVF0000331
SyntenyIVF0000331
Gene Ontology termsGO:0006869 - lipid transport (biological process)
GO:0048868 - pollen tube development (biological process)
GO:0090153 - regulation of sphingolipid biosynthetic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0005319 - lipid transporter activity (molecular function)
InterPro domainsIPR003392 - Protein patched/dispatched


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047847.1 Niemann-Pick C1 protein-like isoform X2 [Cucumis melo var. makuwa]3.20e-109100Show/hide
Query:  MDIFPYSVFYIFFEQYLDIWNTALMNIAIALGAIFIVSLVITSSLWCSGMIILVLAMIVIDLLGVMAILKIQLNAVSVVNILMSIGIAVEFCVHLVHAFS
        MDIFPYSVFYIFFEQYLDIWNTALMNIAIALGAIFIVSLVITSSLWCSGMIILVLAMIVIDLLGVMAILKIQLNAVSVVNILMSIGIAVEFCVHLVHAFS
Subjt:  MDIFPYSVFYIFFEQYLDIWNTALMNIAIALGAIFIVSLVITSSLWCSGMIILVLAMIVIDLLGVMAILKIQLNAVSVVNILMSIGIAVEFCVHLVHAFS

Query:  VSCGDRNQRAQEALSTIGASVFSGITLTKLVGVVVLCFAKSEIFVVYYFQMYLALVIIGFLHGLVFLPVILSMIGPPSRYLIKDDAPVETELLVS
        VSCGDRNQRAQEALSTIGASVFSGITLTKLVGVVVLCFAKSEIFVVYYFQMYLALVIIGFLHGLVFLPVILSMIGPPSRYLIKDDAPVETELLVS
Subjt:  VSCGDRNQRAQEALSTIGASVFSGITLTKLVGVVVLCFAKSEIFVVYYFQMYLALVIIGFLHGLVFLPVILSMIGPPSRYLIKDDAPVETELLVS

KAE8646830.1 hypothetical protein Csa_018310 [Cucumis sativus]4.55e-10696.41Show/hide
Query:  MDIFPYSVFYIFFEQYLDIWNTALMNIAIALGAIFIVSLVITSSLWCSGMIILVLAMIVIDLLGVMAILKIQLNAVSVVNILMSIGIAVEFCVHLVHAFS
        MDIFPYSVFYIFFEQYLDIW TALMNIAIALGAIFIVSLVITSSLW SGMIILVLAMIVIDLLGVMA+LKIQLNAVSVVNILMSIGIAVEFCVHLVHAFS
Subjt:  MDIFPYSVFYIFFEQYLDIWNTALMNIAIALGAIFIVSLVITSSLWCSGMIILVLAMIVIDLLGVMAILKIQLNAVSVVNILMSIGIAVEFCVHLVHAFS

Query:  VSCGDRNQRAQEALSTIGASVFSGITLTKLVGVVVLCFAKSEIFVVYYFQMYLALVIIGFLHGLVFLPVILSMIGPPSRYLIKDDAPVETELLVS
        VSCGDR+QRAQEALSTIGASVFSGITLTKLVGV+VLCFAKSEIFVVYYFQMYLALVIIGFLHGLVFLPVILSMIGPPSRYLI DDAP+ETELLVS
Subjt:  VSCGDRNQRAQEALSTIGASVFSGITLTKLVGVVVLCFAKSEIFVVYYFQMYLALVIIGFLHGLVFLPVILSMIGPPSRYLIKDDAPVETELLVS

TYK02140.1 Niemann-Pick C1 protein-like isoform X2 [Cucumis melo var. makuwa]8.30e-121100Show/hide
Query:  MDIFPYSVFYIFFEQYLDIWNTALMNIAIALGAIFIVSLVITSSLWCSGMIILVLAMIVIDLLGVMAILKIQLNAVSVVNILMSIGIAVEFCVHLVHAFS
        MDIFPYSVFYIFFEQYLDIWNTALMNIAIALGAIFIVSLVITSSLWCSGMIILVLAMIVIDLLGVMAILKIQLNAVSVVNILMSIGIAVEFCVHLVHAFS
Subjt:  MDIFPYSVFYIFFEQYLDIWNTALMNIAIALGAIFIVSLVITSSLWCSGMIILVLAMIVIDLLGVMAILKIQLNAVSVVNILMSIGIAVEFCVHLVHAFS

Query:  VSCGDRNQRAQEALSTIGASVFSGITLTKLVGVVVLCFAKSEIFVVYYFQMYLALVIIGFLHGLVFLPVILSMIGPPSRYLIKDDAPVETELLVS
        VSCGDRNQRAQEALSTIGASVFSGITLTKLVGVVVLCFAKSEIFVVYYFQMYLALVIIGFLHGLVFLPVILSMIGPPSRYLIKDDAPVETELLVS
Subjt:  VSCGDRNQRAQEALSTIGASVFSGITLTKLVGVVVLCFAKSEIFVVYYFQMYLALVIIGFLHGLVFLPVILSMIGPPSRYLIKDDAPVETELLVS

XP_008448193.1 PREDICTED: Niemann-Pick C1 protein-like isoform X1 [Cucumis melo]4.39e-10695.12Show/hide
Query:  MDIFPYSVFYIFFEQYLDIWNTALMNIAIALGAIFIVSLVITSSLWCSGMIILVLAMIVIDLLGVMAILKIQLNAVSVVNILMSIGIAVEFCVHLVHAFS
        MDIFPYSVFYIFFEQYLDIWNTALMNIAIALGAIFIVSLVITSSLWCSGMIILVLAMIVIDLLGVMAILKIQLNAVSVVNILMSIGIAVEFCVHLVHAFS
Subjt:  MDIFPYSVFYIFFEQYLDIWNTALMNIAIALGAIFIVSLVITSSLWCSGMIILVLAMIVIDLLGVMAILKIQLNAVSVVNILMSIGIAVEFCVHLVHAFS

Query:  VS----------CGDRNQRAQEALSTIGASVFSGITLTKLVGVVVLCFAKSEIFVVYYFQMYLALVIIGFLHGLVFLPVILSMIGPPSRYLIKDDAPVET
        VS          CGDRNQRAQEALSTIGASVFSGITLTKLVGVVVLCFAKSEIFVVYYFQMYLALVIIGFLHGLVFLPVILSMIGPPSRYLIKDDAPVET
Subjt:  VS----------CGDRNQRAQEALSTIGASVFSGITLTKLVGVVVLCFAKSEIFVVYYFQMYLALVIIGFLHGLVFLPVILSMIGPPSRYLIKDDAPVET

Query:  ELLVS
        ELLVS
Subjt:  ELLVS

XP_008448194.1 PREDICTED: Niemann-Pick C1 protein-like isoform X2 [Cucumis melo]3.99e-109100Show/hide
Query:  MDIFPYSVFYIFFEQYLDIWNTALMNIAIALGAIFIVSLVITSSLWCSGMIILVLAMIVIDLLGVMAILKIQLNAVSVVNILMSIGIAVEFCVHLVHAFS
        MDIFPYSVFYIFFEQYLDIWNTALMNIAIALGAIFIVSLVITSSLWCSGMIILVLAMIVIDLLGVMAILKIQLNAVSVVNILMSIGIAVEFCVHLVHAFS
Subjt:  MDIFPYSVFYIFFEQYLDIWNTALMNIAIALGAIFIVSLVITSSLWCSGMIILVLAMIVIDLLGVMAILKIQLNAVSVVNILMSIGIAVEFCVHLVHAFS

Query:  VSCGDRNQRAQEALSTIGASVFSGITLTKLVGVVVLCFAKSEIFVVYYFQMYLALVIIGFLHGLVFLPVILSMIGPPSRYLIKDDAPVETELLVS
        VSCGDRNQRAQEALSTIGASVFSGITLTKLVGVVVLCFAKSEIFVVYYFQMYLALVIIGFLHGLVFLPVILSMIGPPSRYLIKDDAPVETELLVS
Subjt:  VSCGDRNQRAQEALSTIGASVFSGITLTKLVGVVVLCFAKSEIFVVYYFQMYLALVIIGFLHGLVFLPVILSMIGPPSRYLIKDDAPVETELLVS

TrEMBL top hitse value%identityAlignment
A0A0A0KAC3 Uncharacterized protein5.1e-8996.41Show/hide
Query:  MDIFPYSVFYIFFEQYLDIWNTALMNIAIALGAIFIVSLVITSSLWCSGMIILVLAMIVIDLLGVMAILKIQLNAVSVVNILMSIGIAVEFCVHLVHAFS
        MDIFPYSVFYIFFEQYLDIW TALMNIAIALGAIFIVSLVITSSLW SGMIILVLAMIVIDLLGVMA+LKIQLNAVSVVNILMSIGIAVEFCVHLVHAFS
Subjt:  MDIFPYSVFYIFFEQYLDIWNTALMNIAIALGAIFIVSLVITSSLWCSGMIILVLAMIVIDLLGVMAILKIQLNAVSVVNILMSIGIAVEFCVHLVHAFS

Query:  VSCGDRNQRAQEALSTIGASVFSGITLTKLVGVVVLCFAKSEIFVVYYFQMYLALVIIGFLHGLVFLPVILSMIGPPSRYLIKDDAPVETELLVS
        VSCGDR+QRAQEALSTIGASVFSGITLTKLVGV+VLCFAKSEIFVVYYFQMYLALVIIGFLHGLVFLPVILSMIGPPSRYLI DDAP+ETELLVS
Subjt:  VSCGDRNQRAQEALSTIGASVFSGITLTKLVGVVVLCFAKSEIFVVYYFQMYLALVIIGFLHGLVFLPVILSMIGPPSRYLIKDDAPVETELLVS

A0A1S3BJ43 Niemann-Pick C1 protein-like isoform X13.5e-9095.12Show/hide
Query:  MDIFPYSVFYIFFEQYLDIWNTALMNIAIALGAIFIVSLVITSSLWCSGMIILVLAMIVIDLLGVMAILKIQLNAVSVVNILMSIGIAVEFCVHLVHAFS
        MDIFPYSVFYIFFEQYLDIWNTALMNIAIALGAIFIVSLVITSSLWCSGMIILVLAMIVIDLLGVMAILKIQLNAVSVVNILMSIGIAVEFCVHLVHAFS
Subjt:  MDIFPYSVFYIFFEQYLDIWNTALMNIAIALGAIFIVSLVITSSLWCSGMIILVLAMIVIDLLGVMAILKIQLNAVSVVNILMSIGIAVEFCVHLVHAFS

Query:  ----------VSCGDRNQRAQEALSTIGASVFSGITLTKLVGVVVLCFAKSEIFVVYYFQMYLALVIIGFLHGLVFLPVILSMIGPPSRYLIKDDAPVET
                  VSCGDRNQRAQEALSTIGASVFSGITLTKLVGVVVLCFAKSEIFVVYYFQMYLALVIIGFLHGLVFLPVILSMIGPPSRYLIKDDAPVET
Subjt:  ----------VSCGDRNQRAQEALSTIGASVFSGITLTKLVGVVVLCFAKSEIFVVYYFQMYLALVIIGFLHGLVFLPVILSMIGPPSRYLIKDDAPVET

Query:  ELLVS
        ELLVS
Subjt:  ELLVS

A0A1S3BJR3 Niemann-Pick C1 protein-like isoform X21.3e-92100Show/hide
Query:  MDIFPYSVFYIFFEQYLDIWNTALMNIAIALGAIFIVSLVITSSLWCSGMIILVLAMIVIDLLGVMAILKIQLNAVSVVNILMSIGIAVEFCVHLVHAFS
        MDIFPYSVFYIFFEQYLDIWNTALMNIAIALGAIFIVSLVITSSLWCSGMIILVLAMIVIDLLGVMAILKIQLNAVSVVNILMSIGIAVEFCVHLVHAFS
Subjt:  MDIFPYSVFYIFFEQYLDIWNTALMNIAIALGAIFIVSLVITSSLWCSGMIILVLAMIVIDLLGVMAILKIQLNAVSVVNILMSIGIAVEFCVHLVHAFS

Query:  VSCGDRNQRAQEALSTIGASVFSGITLTKLVGVVVLCFAKSEIFVVYYFQMYLALVIIGFLHGLVFLPVILSMIGPPSRYLIKDDAPVETELLVS
        VSCGDRNQRAQEALSTIGASVFSGITLTKLVGVVVLCFAKSEIFVVYYFQMYLALVIIGFLHGLVFLPVILSMIGPPSRYLIKDDAPVETELLVS
Subjt:  VSCGDRNQRAQEALSTIGASVFSGITLTKLVGVVVLCFAKSEIFVVYYFQMYLALVIIGFLHGLVFLPVILSMIGPPSRYLIKDDAPVETELLVS

A0A5A7U0V7 Niemann-Pick C1 protein-like isoform X21.3e-92100Show/hide
Query:  MDIFPYSVFYIFFEQYLDIWNTALMNIAIALGAIFIVSLVITSSLWCSGMIILVLAMIVIDLLGVMAILKIQLNAVSVVNILMSIGIAVEFCVHLVHAFS
        MDIFPYSVFYIFFEQYLDIWNTALMNIAIALGAIFIVSLVITSSLWCSGMIILVLAMIVIDLLGVMAILKIQLNAVSVVNILMSIGIAVEFCVHLVHAFS
Subjt:  MDIFPYSVFYIFFEQYLDIWNTALMNIAIALGAIFIVSLVITSSLWCSGMIILVLAMIVIDLLGVMAILKIQLNAVSVVNILMSIGIAVEFCVHLVHAFS

Query:  VSCGDRNQRAQEALSTIGASVFSGITLTKLVGVVVLCFAKSEIFVVYYFQMYLALVIIGFLHGLVFLPVILSMIGPPSRYLIKDDAPVETELLVS
        VSCGDRNQRAQEALSTIGASVFSGITLTKLVGVVVLCFAKSEIFVVYYFQMYLALVIIGFLHGLVFLPVILSMIGPPSRYLIKDDAPVETELLVS
Subjt:  VSCGDRNQRAQEALSTIGASVFSGITLTKLVGVVVLCFAKSEIFVVYYFQMYLALVIIGFLHGLVFLPVILSMIGPPSRYLIKDDAPVETELLVS

A0A5D3BSQ1 Niemann-Pick C1 protein-like isoform X21.3e-92100Show/hide
Query:  MDIFPYSVFYIFFEQYLDIWNTALMNIAIALGAIFIVSLVITSSLWCSGMIILVLAMIVIDLLGVMAILKIQLNAVSVVNILMSIGIAVEFCVHLVHAFS
        MDIFPYSVFYIFFEQYLDIWNTALMNIAIALGAIFIVSLVITSSLWCSGMIILVLAMIVIDLLGVMAILKIQLNAVSVVNILMSIGIAVEFCVHLVHAFS
Subjt:  MDIFPYSVFYIFFEQYLDIWNTALMNIAIALGAIFIVSLVITSSLWCSGMIILVLAMIVIDLLGVMAILKIQLNAVSVVNILMSIGIAVEFCVHLVHAFS

Query:  VSCGDRNQRAQEALSTIGASVFSGITLTKLVGVVVLCFAKSEIFVVYYFQMYLALVIIGFLHGLVFLPVILSMIGPPSRYLIKDDAPVETELLVS
        VSCGDRNQRAQEALSTIGASVFSGITLTKLVGVVVLCFAKSEIFVVYYFQMYLALVIIGFLHGLVFLPVILSMIGPPSRYLIKDDAPVETELLVS
Subjt:  VSCGDRNQRAQEALSTIGASVFSGITLTKLVGVVVLCFAKSEIFVVYYFQMYLALVIIGFLHGLVFLPVILSMIGPPSRYLIKDDAPVETELLVS

SwissProt top hitse value%identityAlignment
O15118 NPC intracellular cholesterol transporter 12.0e-4255.11Show/hide
Query:  IFPYSVFYIFFEQYLDIWNTALMNIAIALGAIFIVSLVITS-SLWCSGMIILVLAMIVIDLLGVMAILKIQLNAVSVVNILMSIGIAVEFCVHLVHAFSV
        +FPYSVFY+F+EQYL I +  + N+ ++LGAIF+V++V+    LW + ++   +AM+++++ GVM +  I LNAVS+VN++MS GI+VEFC H+  AF+V
Subjt:  IFPYSVFYIFFEQYLDIWNTALMNIAIALGAIFIVSLVITS-SLWCSGMIILVLAMIVIDLLGVMAILKIQLNAVSVVNILMSIGIAVEFCVHLVHAFSV

Query:  SC-GDRNQRAQEALSTIGASVFSGITLTKLVGVVVLCFAKSEIFVVYYFQMYLALVIIGFLHGLVFLPVILSMIGP
        S  G R +RA+EAL+ +G+SVFSGITLTK  G+VVL FAKS+IF ++YF+MYLA+V++G  HGL+FLPV+LS IGP
Subjt:  SC-GDRNQRAQEALSTIGASVFSGITLTKLVGVVVLCFAKSEIFVVYYFQMYLALVIIGFLHGLVFLPVILSMIGP

O35604 NPC intracellular cholesterol transporter 12.0e-4255.11Show/hide
Query:  IFPYSVFYIFFEQYLDIWNTALMNIAIALGAIFIVSLVITS-SLWCSGMIILVLAMIVIDLLGVMAILKIQLNAVSVVNILMSIGIAVEFCVHLVHAFSV
        +FPYSVFY+F+EQYL I +  + N++++LG+IF+V+LV+    LW + ++ + +AMI++++ GVM +  I LNAVS+VN++MS GI+VEFC H+  AF++
Subjt:  IFPYSVFYIFFEQYLDIWNTALMNIAIALGAIFIVSLVITS-SLWCSGMIILVLAMIVIDLLGVMAILKIQLNAVSVVNILMSIGIAVEFCVHLVHAFSV

Query:  SC-GDRNQRAQEALSTIGASVFSGITLTKLVGVVVLCFAKSEIFVVYYFQMYLALVIIGFLHGLVFLPVILSMIGP
        S  G R  RA+EAL+ +G+SVFSGITLTK  G+VVL FAKS+IF ++YF+MYLA+V++G  HGL+FLPV+LS IGP
Subjt:  SC-GDRNQRAQEALSTIGASVFSGITLTKLVGVVVLCFAKSEIFVVYYFQMYLALVIIGFLHGLVFLPVILSMIGP

P56941 NPC intracellular cholesterol transporter 14.5e-4254.55Show/hide
Query:  IFPYSVFYIFFEQYLDIWNTALMNIAIALGAIFIVSLVITS-SLWCSGMIILVLAMIVIDLLGVMAILKIQLNAVSVVNILMSIGIAVEFCVHLVHAFSV
        +FPYSVFY+F+EQYL + +  + N+ ++LGAIF+V++V+    LW + ++ + +AMI++++ GVM +  I LNAVS+VN++MS GI+VEFC H+  AF++
Subjt:  IFPYSVFYIFFEQYLDIWNTALMNIAIALGAIFIVSLVITS-SLWCSGMIILVLAMIVIDLLGVMAILKIQLNAVSVVNILMSIGIAVEFCVHLVHAFSV

Query:  SC-GDRNQRAQEALSTIGASVFSGITLTKLVGVVVLCFAKSEIFVVYYFQMYLALVIIGFLHGLVFLPVILSMIGP
        S  G R  RA+EAL+ +G+SVFSGITLTK  G+VVL FAKS+IF ++YF+MYLA+V++G  HGL+FLPV+LS IGP
Subjt:  SC-GDRNQRAQEALSTIGASVFSGITLTKLVGVVVLCFAKSEIFVVYYFQMYLALVIIGFLHGLVFLPVILSMIGP

Q12200 NPC intracellular sterol transporter 1-related protein 11.6e-3145.64Show/hide
Query:  MDIFPYSVFYIFFEQYLDIWNTALMNIAIALGAIFIVSLVITSSLWCSGMIILVLAMIVIDLLGVMAILKIQLNAVSVVNILMSIGIAVEFCVHLVHAFS
        +D+F YS FYIFF QY  +    L  I  A+  IF +S V   ++  S ++ LV+ MI++D+  +MA+L I LNAVS+VN+++ +G+ VEFCVH+V +F+
Subjt:  MDIFPYSVFYIFFEQYLDIWNTALMNIAIALGAIFIVSLVITSSLWCSGMIILVLAMIVIDLLGVMAILKIQLNAVSVVNILMSIGIAVEFCVHLVHAFS

Query:  V----SCGDRNQRAQEALSTIGASVFSGITLTKLVGVVVLCFAKSEIFVVYYFQMYLALVIIGFLHGLVFLPVILSMIGPPSRYLIKDDAPVETE
        V    +  D N R   +L+TIG SV  GITLTK +GV VL FA+S+IF V+YF+M+  L+I+  LH L+FLP +LS+ G  S    +DD+ +E E
Subjt:  V----SCGDRNQRAQEALSTIGASVFSGITLTKLVGVVVLCFAKSEIFVVYYFQMYLALVIIGFLHGLVFLPVILSMIGPPSRYLIKDDAPVETE

Q9VRC9 NPC intracellular cholesterol transporter 1 homolog 1b8.3e-3648.6Show/hide
Query:  DIFPYSVFYIFFEQYLDIWNTALMNIAIALGAIFIVSLVITSSLWCSGMIILVLAM-IVIDLLGVMAILKIQLNAVSVVNILMSIGIAVEFCVHLVHAFS
        +IF Y VFYI++EQYL IW  A+ ++ ++L AIF+V+L+IT     S  I+L + + I+I++LG+M    I LNA+S+VN+++ +GI VEF  H+V +F 
Subjt:  DIFPYSVFYIFFEQYLDIWNTALMNIAIALGAIFIVSLVITSSLWCSGMIILVLAM-IVIDLLGVMAILKIQLNAVSVVNILMSIGIAVEFCVHLVHAFS

Query:  VSCGDRNQRAQEALSTIGASVFSGITLTKLVGVVVLCFAKSEIFVVYYFQMYLALVIIGFLHGLVFLPVILSMIGPPSR
         + G   +RA+ +L+  G+SV SGITLTK  G+VVL F+ S+IF V+YF+MYL +V+IG  HGL+ LPV+LS++GPP +
Subjt:  VSCGDRNQRAQEALSTIGASVFSGITLTKLVGVVVLCFAKSEIFVVYYFQMYLALVIIGFLHGLVFLPVILSMIGPPSR

Arabidopsis top hitse value%identityAlignment
AT1G42470.1 Patched family protein2.0e-3270Show/hide
Query:  MDIFPYSVFYIFFEQYLDIWNTALMNIAIALGAIFIVSLVITSSLWCSGMIILVLAMIVIDLLGVMAILKIQLNAVSVVNILMSIGIAVEFCVHLVHAFS
        M+I+PYSVFY+FFEQYLDIW TAL+N++IA+ A+F+V L+IT S W S +I+LV+AMI+IDLLGVMA+  IQLNA+SVVN++MS+GIAVEFCVH+ HAFS
Subjt:  MDIFPYSVFYIFFEQYLDIWNTALMNIAIALGAIFIVSLVITSSLWCSGMIILVLAMIVIDLLGVMAILKIQLNAVSVVNILMSIGIAVEFCVHLVHAFS

AT4G38350.1 Patched family protein1.9e-6778.53Show/hide
Query:  MDIFPYSVFYIFFEQYLDIWNTALMNIAIALGAIFIVSLVITSSLWCSGMIILVLAMIVIDLLGVMAILKIQLNAVSVVNILMSIGIAVEFCVHLVHAFS
        +DIFPYSVFYIFFEQYL+IW  AL N+AIA+GAIFIV  +ITSS W S +I+LVL MI++DL+G+M IL IQLNAVSVVN++MSIGIAVEFCVH+ HAF 
Subjt:  MDIFPYSVFYIFFEQYLDIWNTALMNIAIALGAIFIVSLVITSSLWCSGMIILVLAMIVIDLLGVMAILKIQLNAVSVVNILMSIGIAVEFCVHLVHAFS

Query:  VSCGDRNQRAQEALSTIGASVFSGITLTKLVGVVVLCFAKSEIFVVYYFQMYLALVIIGFLHGLVFLPVILSMIGPP
        +S GDR  RA+EAL T+GASVFSGITLTKLVGV+VLCFA+SEIFVVYYFQMYLALVIIGFLHGLVFLPVILS+ GPP
Subjt:  VSCGDRNQRAQEALSTIGASVFSGITLTKLVGVVVLCFAKSEIFVVYYFQMYLALVIIGFLHGLVFLPVILSMIGPP

AT4G38350.2 Patched family protein1.9e-6778.53Show/hide
Query:  MDIFPYSVFYIFFEQYLDIWNTALMNIAIALGAIFIVSLVITSSLWCSGMIILVLAMIVIDLLGVMAILKIQLNAVSVVNILMSIGIAVEFCVHLVHAFS
        +DIFPYSVFYIFFEQYL+IW  AL N+AIA+GAIFIV  +ITSS W S +I+LVL MI++DL+G+M IL IQLNAVSVVN++MSIGIAVEFCVH+ HAF 
Subjt:  MDIFPYSVFYIFFEQYLDIWNTALMNIAIALGAIFIVSLVITSSLWCSGMIILVLAMIVIDLLGVMAILKIQLNAVSVVNILMSIGIAVEFCVHLVHAFS

Query:  VSCGDRNQRAQEALSTIGASVFSGITLTKLVGVVVLCFAKSEIFVVYYFQMYLALVIIGFLHGLVFLPVILSMIGPP
        +S GDR  RA+EAL T+GASVFSGITLTKLVGV+VLCFA+SEIFVVYYFQMYLALVIIGFLHGLVFLPVILS+ GPP
Subjt:  VSCGDRNQRAQEALSTIGASVFSGITLTKLVGVVVLCFAKSEIFVVYYFQMYLALVIIGFLHGLVFLPVILSMIGPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATATCTTTCCATACTCTGTCTTCTATATTTTCTTTGAGCAGTATCTTGATATATGGAATACAGCTTTGATGAACATCGCCATAGCGCTTGGTGCCATATTTATTGT
CTCTCTGGTCATCACCTCTAGTTTGTGGTGTTCGGGAATGATTATACTTGTTTTGGCTATGATTGTTATTGATCTCTTGGGAGTAATGGCAATTCTGAAAATTCAACTAA
ATGCAGTCTCTGTTGTTAACATATTGATGTCGATAGGAATTGCTGTTGAGTTTTGCGTCCATTTAGTTCATGCATTTTCGGTTAGCTGTGGCGACAGAAATCAGCGAGCA
CAGGAGGCTTTGAGTACAATCGGAGCCTCTGTATTCAGTGGGATCACTCTCACAAAGCTGGTTGGAGTGGTCGTTCTTTGCTTCGCCAAATCAGAGATATTTGTGGTTTA
TTACTTCCAAATGTACCTTGCATTGGTCATCATCGGTTTCCTCCATGGCCTCGTGTTTCTACCTGTAATTTTGAGTATGATTGGACCACCATCAAGATATTTGATTAAAG
ATGATGCTCCTGTGGAAACTGAGCTTCTTGTTTCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGATATCTTTCCATACTCTGTCTTCTATATTTTCTTTGAGCAGTATCTTGATATATGGAATACAGCTTTGATGAACATCGCCATAGCGCTTGGTGCCATATTTATTGT
CTCTCTGGTCATCACCTCTAGTTTGTGGTGTTCGGGAATGATTATACTTGTTTTGGCTATGATTGTTATTGATCTCTTGGGAGTAATGGCAATTCTGAAAATTCAACTAA
ATGCAGTCTCTGTTGTTAACATATTGATGTCGATAGGAATTGCTGTTGAGTTTTGCGTCCATTTAGTTCATGCATTTTCGGTTAGCTGTGGCGACAGAAATCAGCGAGCA
CAGGAGGCTTTGAGTACAATCGGAGCCTCTGTATTCAGTGGGATCACTCTCACAAAGCTGGTTGGAGTGGTCGTTCTTTGCTTCGCCAAATCAGAGATATTTGTGGTTTA
TTACTTCCAAATGTACCTTGCATTGGTCATCATCGGTTTCCTCCATGGCCTCGTGTTTCTACCTGTAATTTTGAGTATGATTGGACCACCATCAAGATATTTGATTAAAG
ATGATGCTCCTGTGGAAACTGAGCTTCTTGTTTCATAA
Protein sequenceShow/hide protein sequence
MDIFPYSVFYIFFEQYLDIWNTALMNIAIALGAIFIVSLVITSSLWCSGMIILVLAMIVIDLLGVMAILKIQLNAVSVVNILMSIGIAVEFCVHLVHAFSVSCGDRNQRA
QEALSTIGASVFSGITLTKLVGVVVLCFAKSEIFVVYYFQMYLALVIIGFLHGLVFLPVILSMIGPPSRYLIKDDAPVETELLVS