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IVF0000367 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0000367
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag protease polyprotein
Genome locationchr12:3150531..3150815
RNA-Seq ExpressionIVF0000367
SyntenyIVF0000367
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026302.1 hypothetical protein E6C27_scaffold19G003110 [Cucumis melo var. makuwa]5.08e-1346.07Show/hide
Query:  VLDRSYQGGGFNSKSRSSPDRSWIADASITSPNDEGARSLLLGQWISRQKPDRPPIEVGSLTAIPSLQTTKVPDRSYQGNGSDGKSPIV
        + DR YQGGG ++K+R SP RSWIAD  +TSPNDEG RS+L                              V D SYQG GSD KSPIV
Subjt:  VLDRSYQGGGFNSKSRSSPDRSWIADASITSPNDEGARSLLLGQWISRQKPDRPPIEVGSLTAIPSLQTTKVPDRSYQGNGSDGKSPIV

KAA0033937.1 hypothetical protein E6C27_scaffold43059G001310 [Cucumis melo var. makuwa]2.70e-1164.15Show/hide
Query:  TKVLDRSYQGGGFNSKSRSSPDRSWIADASITSPNDEGARSLLLGQWISRQKP
        TKV DRSY G     K+RSSPDRSWI D+SITSPND+GARSLL G     + P
Subjt:  TKVLDRSYQGGGFNSKSRSSPDRSWIADASITSPNDEGARSLLLGQWISRQKP

KAA0050345.1 gag protease polyprotein [Cucumis melo var. makuwa]4.31e-2456.86Show/hide
Query:  TKVLDRSYQGGGFNSKSRSSPDRSWIADASITSPNDEGARSLLLGQWI---------SRQKPDRPPIEVGSLTAIPSLQTTKVPDRSYQGNGSDGKSPIV
        TKV DRSYQ GG N KS   P RSWI D SITSP DEGA+SLL G+WI         +R  PDR  I  GS+T+       +VPDRSYQG GSD KSPI+
Subjt:  TKVLDRSYQGGGFNSKSRSSPDRSWIADASITSPNDEGARSLLLGQWI---------SRQKPDRPPIEVGSLTAIPSLQTTKVPDRSYQGNGSDGKSPIV

Query:  PQ
        P+
Subjt:  PQ

KAA0062017.1 uncharacterized protein E6C27_scaffold89G003480 [Cucumis melo var. makuwa]7.96e-1453.12Show/hide
Query:  TKVLDRSYQGGGFNSKSRSSPDRSWIADASITSPNDEGARSLLLGQWIS---RQKPDRPPIEVGSLTAIPSLQTTKVPDRSYQGNGSDGKSPIVPQ
        T V DRSYQ     +KSRSSPDRSWIAD SITSPND GARSLL G  ++   R  PDR  I  GS+T+        +      G G D KSPIVP+
Subjt:  TKVLDRSYQGGGFNSKSRSSPDRSWIADASITSPNDEGARSLLLGQWIS---RQKPDRPPIEVGSLTAIPSLQTTKVPDRSYQGNGSDGKSPIVPQ

TYK21495.1 hypothetical protein E5676_scaffold305G00320 [Cucumis melo var. makuwa]3.71e-1346.07Show/hide
Query:  VLDRSYQGGGFNSKSRSSPDRSWIADASITSPNDEGARSLLLGQWISRQKPDRPPIEVGSLTAIPSLQTTKVPDRSYQGNGSDGKSPIV
        + DR YQGGG ++K+R SP RSWIAD  +TSPNDEG RS+L                              V D SYQG GSD KSPIV
Subjt:  VLDRSYQGGGFNSKSRSSPDRSWIADASITSPNDEGARSLLLGQWISRQKPDRPPIEVGSLTAIPSLQTTKVPDRSYQGNGSDGKSPIV

TrEMBL top hitse value%identityAlignment
A0A5A7SMD7 Uncharacterized protein1.9e-0947.13Show/hide
Query:  DRSYQGGGFNSKSRSSPDRSWIADASITSPNDEGARSLLLGQWISRQKPDRPPIEVGSLTAIPSLQTTKVPDRSYQGNGSDGKSPIV
        DR YQGGG ++K+R SP RSWIAD  +TSPNDEG RS+L                              V D SYQG GSD KSPIV
Subjt:  DRSYQGGGFNSKSRSSPDRSWIADASITSPNDEGARSLLLGQWISRQKPDRPPIEVGSLTAIPSLQTTKVPDRSYQGNGSDGKSPIV

A0A5A7SXD7 Uncharacterized protein2.1e-0862.5Show/hide
Query:  TKVLDRSYQGGGFNSKSRSSPDRSWIADASITSPNDEGARSLLLGQWISRQKPDRP
        TKV DRSY G     K+RSSPDRSWI D+SITSPND+GARSLL G     + P  P
Subjt:  TKVLDRSYQGGGFNSKSRSSPDRSWIADASITSPNDEGARSLLLGQWISRQKPDRP

A0A5A7U9R6 Gag protease polyprotein2.7e-1956.86Show/hide
Query:  TKVLDRSYQGGGFNSKSRSSPDRSWIADASITSPNDEGARSLLLGQWI---------SRQKPDRPPIEVGSLTAIPSLQTTKVPDRSYQGNGSDGKSPIV
        TKV DRSYQ GG N KS   P RSWI D SITSP DEGA+SLL G+WI         +R  PDR  I  GS+T+       +VPDRSYQG GSD KSPI+
Subjt:  TKVLDRSYQGGGFNSKSRSSPDRSWIADASITSPNDEGARSLLLGQWI---------SRQKPDRPPIEVGSLTAIPSLQTTKVPDRSYQGNGSDGKSPIV

Query:  PQ
        P+
Subjt:  PQ

A0A5A7V4Z7 RNase H domain-containing protein2.1e-1154.17Show/hide
Query:  TKVLDRSYQGGGFNSKSRSSPDRSWIADASITSPNDEGARSLLLGQWI---SRQKPDRPPIEVGSLTAIPSLQTTKVPDRSYQGNGSDGKSPIVPQ
        T V DRSYQ     +KSRSSPDRSWIAD SITSPND GARSLL G  +   +R  PDR  I  GS+T+ P+    +       G G D KSPIVP+
Subjt:  TKVLDRSYQGGGFNSKSRSSPDRSWIADASITSPNDEGARSLLLGQWI---SRQKPDRPPIEVGSLTAIPSLQTTKVPDRSYQGNGSDGKSPIVPQ

A0A5D3DD90 Uncharacterized protein1.9e-0947.13Show/hide
Query:  DRSYQGGGFNSKSRSSPDRSWIADASITSPNDEGARSLLLGQWISRQKPDRPPIEVGSLTAIPSLQTTKVPDRSYQGNGSDGKSPIV
        DR YQGGG ++K+R SP RSWIAD  +TSPNDEG RS+L                              V D SYQG GSD KSPIV
Subjt:  DRSYQGGGFNSKSRSSPDRSWIADASITSPNDEGARSLLLGQWISRQKPDRPPIEVGSLTAIPSLQTTKVPDRSYQGNGSDGKSPIV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAAGGTGCTCGATCGCTCTTACCAGGGCGGTGGATTTAACAGCAAAAGTCGATCGTCCCCTGATAGAAGTTGGATTGCTGACGCCAGTATCACCTCTCCAAATGA
CGAAGGTGCCCGATCGCTCCTACTAGGGCAGTGGATTTCACGGCAAAAGCCCGATCGTCCCCCAATAGAAGTTGGATCGCTGACGGCAATACCATCTCTTCAAACGACGA
AGGTGCCCGATCGCTCCTACCAGGGCAATGGATCTGACGGCAAAAGCCCGATCGTCCCCCAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGACGAAGGTGCTCGATCGCTCTTACCAGGGCGGTGGATTTAACAGCAAAAGTCGATCGTCCCCTGATAGAAGTTGGATTGCTGACGCCAGTATCACCTCTCCAAATGA
CGAAGGTGCCCGATCGCTCCTACTAGGGCAGTGGATTTCACGGCAAAAGCCCGATCGTCCCCCAATAGAAGTTGGATCGCTGACGGCAATACCATCTCTTCAAACGACGA
AGGTGCCCGATCGCTCCTACCAGGGCAATGGATCTGACGGCAAAAGCCCGATCGTCCCCCAGTAG
Protein sequenceShow/hide protein sequence
MTKVLDRSYQGGGFNSKSRSSPDRSWIADASITSPNDEGARSLLLGQWISRQKPDRPPIEVGSLTAIPSLQTTKVPDRSYQGNGSDGKSPIVPQ