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IVF0000377 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0000377
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr06:7531250..7532066
RNA-Seq ExpressionIVF0000377
SyntenyIVF0000377
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036767.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]9.74e-14488.98Show/hide
Query:  MRWHNRRRFTATGPPIEQFDMDVTQEYTHWYKNISKLYITQLGAAMSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLV
        MRWHNRRRFTATGPPIEQFDMDVTQEY HWYKNISKLYITQ GAAMSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLV
Subjt:  MRWHNRRRFTATGPPIEQFDMDVTQEYTHWYKNISKLYITQLGAAMSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLV

Query:  QEPDQLEEVDQHGEEVPPMTETQSEHNYVSPVMMMPTFETTYYDSGVGQSLDFGRGYYNSEAG--------------SDPSSSYMHGHGRGRGEHNEYLY
        QEPDQLEEVDQHG+EVPPMT+TQSEHNYVSPVMMMPTF TTYYDSGVGQS DFGRGYYNS+AG              SDPSSSYMHGHGRGRG+HNEYLY
Subjt:  QEPDQLEEVDQHGEEVPPMTETQSEHNYVSPVMMMPTFETTYYDSGVGQSLDFGRGYYNSEAG--------------SDPSSSYMHGHGRGRGEHNEYLY

Query:  YEVPAAVLEQSDELQQQENAAVPEQLDEQQQQENQEEIQHQRVQS
        YEVPAAV EQSDELQQQENAAVP Q DEQQQQEN EEIQ QRVQS
Subjt:  YEVPAAVLEQSDELQQQENAAVPEQLDEQQQQENQEEIQHQRVQS

KAA0067080.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]3.77e-14188.98Show/hide
Query:  MRWHNRRRFTATGPPIEQFDMDVTQEYTHWYKNISKLYITQLGAAMSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLV
        MRWHNRRRFTATGPPIEQFDMDVTQEY +WYKNISKLYITQ GA MSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLV
Subjt:  MRWHNRRRFTATGPPIEQFDMDVTQEYTHWYKNISKLYITQLGAAMSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLV

Query:  QEPDQLEEVDQHGEEVPPMTETQSEHNYVSPVMMMPTFETTYYDSGVGQSLDFGRGYYNSEAG--------------SDPSSSYMHGHGRGRGEHNEYLY
        QEPDQLEEVDQHGEEVPPMT+TQSEHNYVSPVMMMPTF TTYYDS VGQS DFGRGYYNSEAG              SDPSSSYMHGHGRGRGEHNEYLY
Subjt:  QEPDQLEEVDQHGEEVPPMTETQSEHNYVSPVMMMPTFETTYYDSGVGQSLDFGRGYYNSEAG--------------SDPSSSYMHGHGRGRGEHNEYLY

Query:  YEVPAAVLEQSDELQQQENAAVPEQLDEQQQQENQEEIQHQRVQS
        YEVPAAV EQS+ELQQQENAAVP Q DEQQQQENQEEIQ QRVQS
Subjt:  YEVPAAVLEQSDELQQQENAAVPEQLDEQQQQENQEEIQHQRVQS

TYJ95836.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.53e-13588.98Show/hide
Query:  MRWHNRRRFTATGPPIEQFDMDVTQEYTHWYKNISKLYITQLGAAMSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLV
        MRWHNRRRFTATGPPIEQFDMDVTQEY HWYKNISKLYITQ GAAMSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLV
Subjt:  MRWHNRRRFTATGPPIEQFDMDVTQEYTHWYKNISKLYITQLGAAMSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLV

Query:  QEPDQLEEVDQHGEEVPPMTETQSEHNYVSPVMMMPTFETTYYDSGVGQSLDFGRGYYNSEAG--------------SDPSSSYMHGHGRGRGEHNEYLY
        QEPDQLEEVDQHG+EVPPMT+TQSEHNYVSPVMMMPTF TTYYDSGVGQS DFGRGYYNS+AG              SDPSSSYMHGHGRGRG+HNEYLY
Subjt:  QEPDQLEEVDQHGEEVPPMTETQSEHNYVSPVMMMPTFETTYYDSGVGQSLDFGRGYYNSEAG--------------SDPSSSYMHGHGRGRGEHNEYLY

Query:  YEVPAAVLEQSDELQQQENAAVPEQLDEQQQQENQEEIQHQRVQS
        YEVPAAV EQSDELQQQENAAVP Q DEQQQQEN EEIQ QRVQS
Subjt:  YEVPAAVLEQSDELQQQENAAVPEQLDEQQQQENQEEIQHQRVQS

TYK27427.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.07e-13387.4Show/hide
Query:  MRWHNRRRFTATGPPIEQFDMDVTQEYTHWYKNISKLYITQLGAAMSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLV
        MRWHNRRRFTATGPPIEQFDMDVTQEY HWYKNISKLYITQ GAAMSHLRSNN RLRN+ADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLV
Subjt:  MRWHNRRRFTATGPPIEQFDMDVTQEYTHWYKNISKLYITQLGAAMSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLV

Query:  QEPDQLEEVDQHGEEVPPMTETQ--SEHNYVSPVMMMPTFETTYYDSGVGQSLDFGRGYYNSEAG--------------SDPSSSYMHGHGRGRGEHNEY
        QE DQLEEVDQHGEEVPPMT+TQ  SEHNYVSPVMMMPTF  TYYDSGVGQS DFGRGYYNSEAG              SDPSSSYMHGHGRGRGEHNEY
Subjt:  QEPDQLEEVDQHGEEVPPMTETQ--SEHNYVSPVMMMPTFETTYYDSGVGQSLDFGRGYYNSEAG--------------SDPSSSYMHGHGRGRGEHNEY

Query:  LYYEVPAAVLEQSDELQQQENAAVPEQLDEQQQQENQEEIQHQRVQ
        LYY+VPAAV EQSDE QQQENAAVPEQ DEQQQQEN EEIQ QRVQ
Subjt:  LYYEVPAAVLEQSDELQQQENAAVPEQLDEQQQQENQEEIQHQRVQ

XP_008449513.1 PREDICTED: mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo]3.45e-14387.4Show/hide
Query:  MRWHNRRRFTATGPPIEQFDMDVTQEYTHWYKNISKLYITQLGAAMSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLV
        MRWHNRRRFTATGPPIEQFDMDVTQEY HWYKNISKLYITQ GAAMSHLRSNN RLRN+ADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLV
Subjt:  MRWHNRRRFTATGPPIEQFDMDVTQEYTHWYKNISKLYITQLGAAMSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLV

Query:  QEPDQLEEVDQHGEEVPPMTETQ--SEHNYVSPVMMMPTFETTYYDSGVGQSLDFGRGYYNSEAG--------------SDPSSSYMHGHGRGRGEHNEY
        QE DQLEEVDQHGEEVPPMT+TQ  SEHNYVSPVMMMPTF  TYYDSGVGQS DFGRGYYNSEAG              SDPSSSYMHGHGRGRGEHNEY
Subjt:  QEPDQLEEVDQHGEEVPPMTETQ--SEHNYVSPVMMMPTFETTYYDSGVGQSLDFGRGYYNSEAG--------------SDPSSSYMHGHGRGRGEHNEY

Query:  LYYEVPAAVLEQSDELQQQENAAVPEQLDEQQQQENQEEIQHQRVQ
        LYY+VPAAV EQSDE QQQENAAVPEQ DEQQQQEN EEIQ QRVQ
Subjt:  LYYEVPAAVLEQSDELQQQENAAVPEQLDEQQQQENQEEIQHQRVQ

TrEMBL top hitse value%identityAlignment
A0A1S3BLK4 mediator of RNA polymerase II transcription subunit 12-like isoform X17.4e-11187.4Show/hide
Query:  MRWHNRRRFTATGPPIEQFDMDVTQEYTHWYKNISKLYITQLGAAMSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLV
        MRWHNRRRFTATGPPIEQFDMDVTQEY HWYKNISKLYITQ GAAMSHLRSNN RLRN+ADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLV
Subjt:  MRWHNRRRFTATGPPIEQFDMDVTQEYTHWYKNISKLYITQLGAAMSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLV

Query:  QEPDQLEEVDQHGEEVPPM--TETQSEHNYVSPVMMMPTFETTYYDSGVGQSLDFGRGYYNSEA--------------GSDPSSSYMHGHGRGRGEHNEY
        QE DQLEEVDQHGEEVPPM  T+TQSEHNYVSPVMMMPTF  TYYDSGVGQS DFGRGYYNSEA              GSDPSSSYMHGHGRGRGEHNEY
Subjt:  QEPDQLEEVDQHGEEVPPM--TETQSEHNYVSPVMMMPTFETTYYDSGVGQSLDFGRGYYNSEA--------------GSDPSSSYMHGHGRGRGEHNEY

Query:  LYYEVPAAVLEQSDELQQQENAAVPEQLDEQQQQENQEEIQHQRVQ
        LYY+VPAAV EQSDE QQQENAAVPEQ DEQQQQEN EEIQ QRVQ
Subjt:  LYYEVPAAVLEQSDELQQQENAAVPEQLDEQQQQENQEEIQHQRVQ

A0A5A7T598 Serine/threonine-protein phosphatase 7 long form-like protein4.2e-11488.98Show/hide
Query:  MRWHNRRRFTATGPPIEQFDMDVTQEYTHWYKNISKLYITQLGAAMSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLV
        MRWHNRRRFTATGPPIEQFDMDVTQEY HWYKNISKLYITQ GAAMSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLV
Subjt:  MRWHNRRRFTATGPPIEQFDMDVTQEYTHWYKNISKLYITQLGAAMSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLV

Query:  QEPDQLEEVDQHGEEVPPMTETQSEHNYVSPVMMMPTFETTYYDSGVGQSLDFGRGYYNSEA--------------GSDPSSSYMHGHGRGRGEHNEYLY
        QEPDQLEEVDQHG+EVPPMT+TQSEHNYVSPVMMMPTF TTYYDSGVGQS DFGRGYYNS+A              GSDPSSSYMHGHGRGRG+HNEYLY
Subjt:  QEPDQLEEVDQHGEEVPPMTETQSEHNYVSPVMMMPTFETTYYDSGVGQSLDFGRGYYNSEA--------------GSDPSSSYMHGHGRGRGEHNEYLY

Query:  YEVPAAVLEQSDELQQQENAAVPEQLDEQQQQENQEEIQHQRVQS
        YEVPAAV EQSDELQQQENAAVP Q DEQQQQEN EEIQ QRVQS
Subjt:  YEVPAAVLEQSDELQQQENAAVPEQLDEQQQQENQEEIQHQRVQS

A0A5A7VIP6 Mediator of RNA polymerase II transcription subunit 12-like isoform X12.7e-11388.98Show/hide
Query:  MRWHNRRRFTATGPPIEQFDMDVTQEYTHWYKNISKLYITQLGAAMSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLV
        MRWHNRRRFTATGPPIEQFDMDVTQEY +WYKNISKLYITQ GA MSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLV
Subjt:  MRWHNRRRFTATGPPIEQFDMDVTQEYTHWYKNISKLYITQLGAAMSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLV

Query:  QEPDQLEEVDQHGEEVPPMTETQSEHNYVSPVMMMPTFETTYYDSGVGQSLDFGRGYYNSEA--------------GSDPSSSYMHGHGRGRGEHNEYLY
        QEPDQLEEVDQHGEEVPPMT+TQSEHNYVSPVMMMPTF TTYYDS VGQS DFGRGYYNSEA              GSDPSSSYMHGHGRGRGEHNEYLY
Subjt:  QEPDQLEEVDQHGEEVPPMTETQSEHNYVSPVMMMPTFETTYYDSGVGQSLDFGRGYYNSEA--------------GSDPSSSYMHGHGRGRGEHNEYLY

Query:  YEVPAAVLEQSDELQQQENAAVPEQLDEQQQQENQEEIQHQRVQS
        YEVPAAV EQS+ELQQQENAAVP Q DEQQQQENQEEIQ QRVQS
Subjt:  YEVPAAVLEQSDELQQQENAAVPEQLDEQQQQENQEEIQHQRVQS

A0A5D3BAB0 Serine/threonine-protein phosphatase 7 long form-like protein4.2e-11488.98Show/hide
Query:  MRWHNRRRFTATGPPIEQFDMDVTQEYTHWYKNISKLYITQLGAAMSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLV
        MRWHNRRRFTATGPPIEQFDMDVTQEY HWYKNISKLYITQ GAAMSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLV
Subjt:  MRWHNRRRFTATGPPIEQFDMDVTQEYTHWYKNISKLYITQLGAAMSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLV

Query:  QEPDQLEEVDQHGEEVPPMTETQSEHNYVSPVMMMPTFETTYYDSGVGQSLDFGRGYYNSEA--------------GSDPSSSYMHGHGRGRGEHNEYLY
        QEPDQLEEVDQHG+EVPPMT+TQSEHNYVSPVMMMPTF TTYYDSGVGQS DFGRGYYNS+A              GSDPSSSYMHGHGRGRG+HNEYLY
Subjt:  QEPDQLEEVDQHGEEVPPMTETQSEHNYVSPVMMMPTFETTYYDSGVGQSLDFGRGYYNSEA--------------GSDPSSSYMHGHGRGRGEHNEYLY

Query:  YEVPAAVLEQSDELQQQENAAVPEQLDEQQQQENQEEIQHQRVQS
        YEVPAAV EQSDELQQQENAAVP Q DEQQQQEN EEIQ QRVQS
Subjt:  YEVPAAVLEQSDELQQQENAAVPEQLDEQQQQENQEEIQHQRVQS

A0A5D3DUI1 Mediator of RNA polymerase II transcription subunit 12-like isoform X17.4e-11187.4Show/hide
Query:  MRWHNRRRFTATGPPIEQFDMDVTQEYTHWYKNISKLYITQLGAAMSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLV
        MRWHNRRRFTATGPPIEQFDMDVTQEY HWYKNISKLYITQ GAAMSHLRSNN RLRN+ADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLV
Subjt:  MRWHNRRRFTATGPPIEQFDMDVTQEYTHWYKNISKLYITQLGAAMSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLV

Query:  QEPDQLEEVDQHGEEVPPM--TETQSEHNYVSPVMMMPTFETTYYDSGVGQSLDFGRGYYNSEA--------------GSDPSSSYMHGHGRGRGEHNEY
        QE DQLEEVDQHGEEVPPM  T+TQSEHNYVSPVMMMPTF  TYYDSGVGQS DFGRGYYNSEA              GSDPSSSYMHGHGRGRGEHNEY
Subjt:  QEPDQLEEVDQHGEEVPPM--TETQSEHNYVSPVMMMPTFETTYYDSGVGQSLDFGRGYYNSEA--------------GSDPSSSYMHGHGRGRGEHNEY

Query:  LYYEVPAAVLEQSDELQQQENAAVPEQLDEQQQQENQEEIQHQRVQ
        LYY+VPAAV EQSDE QQQENAAVPEQ DEQQQQEN EEIQ QRVQ
Subjt:  LYYEVPAAVLEQSDELQQQENAAVPEQLDEQQQQENQEEIQHQRVQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGATGGCATAATCGCAGAAGGTTTACTGCTACGGGACCTCCAATTGAGCAGTTTGATATGGATGTAACTCAAGAATACACCCATTGGTACAAAAACATTAGCAAGCT
CTATATCACCCAACTGGGAGCTGCTATGAGTCATCTGAGATCAAACAATATTAGACTTCGGAATGTTGCAGATGATCCACAACAGGTTCTAAATATATGCAACGATAACG
AGCAGTACATGGAGAACATCCACTATATGTACGATGTCCCTATTGTACCTGCTCCAGTTCAGAGGAGACGTCCTCTAGTGCAAGAGCCCGATCAATTGGAAGAAGTTGAC
CAACACGGGGAAGAAGTGCCTCCAATGACAGAGACACAAAGCGAACATAATTACGTTAGTCCAGTAATGATGATGCCAACATTTGAAACGACATATTATGATTCAGGAGT
CGGTCAATCGTTAGACTTTGGAAGAGGATATTACAATTCAGAGGCAGGGAGCGATCCATCGTCTTCATACATGCATGGTCACGGGCGTGGTCGTGGAGAACATAATGAAT
ATTTGTACTACGAAGTGCCTGCAGCGGTACTTGAACAATCAGATGAGCTACAACAACAAGAGAATGCAGCAGTACCCGAGCAATTAGATGAGCAACAACAACAAGAGAAT
CAGGAGGAAATACAACATCAGAGAGTTCAAAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCGATGGCATAATCGCAGAAGGTTTACTGCTACGGGACCTCCAATTGAGCAGTTTGATATGGATGTAACTCAAGAATACACCCATTGGTACAAAAACATTAGCAAGCT
CTATATCACCCAACTGGGAGCTGCTATGAGTCATCTGAGATCAAACAATATTAGACTTCGGAATGTTGCAGATGATCCACAACAGGTTCTAAATATATGCAACGATAACG
AGCAGTACATGGAGAACATCCACTATATGTACGATGTCCCTATTGTACCTGCTCCAGTTCAGAGGAGACGTCCTCTAGTGCAAGAGCCCGATCAATTGGAAGAAGTTGAC
CAACACGGGGAAGAAGTGCCTCCAATGACAGAGACACAAAGCGAACATAATTACGTTAGTCCAGTAATGATGATGCCAACATTTGAAACGACATATTATGATTCAGGAGT
CGGTCAATCGTTAGACTTTGGAAGAGGATATTACAATTCAGAGGCAGGGAGCGATCCATCGTCTTCATACATGCATGGTCACGGGCGTGGTCGTGGAGAACATAATGAAT
ATTTGTACTACGAAGTGCCTGCAGCGGTACTTGAACAATCAGATGAGCTACAACAACAAGAGAATGCAGCAGTACCCGAGCAATTAGATGAGCAACAACAACAAGAGAAT
CAGGAGGAAATACAACATCAGAGAGTTCAAAGTTGA
Protein sequenceShow/hide protein sequence
MRWHNRRRFTATGPPIEQFDMDVTQEYTHWYKNISKLYITQLGAAMSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVD
QHGEEVPPMTETQSEHNYVSPVMMMPTFETTYYDSGVGQSLDFGRGYYNSEAGSDPSSSYMHGHGRGRGEHNEYLYYEVPAAVLEQSDELQQQENAAVPEQLDEQQQQEN
QEEIQHQRVQS