CuGenDBv2

Gene ID	IVF0000386
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Reverse transcriptase
Genome location	chr07:8602431..8604757
RNA-Seq Expression	IVF0000386
Synteny	IVF0000386
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0015074 - DNA integration (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR000477 - Reverse transcriptase domain IPR001878 - Zinc finger, CCHC-type IPR005162 - Retrotransposon gag domain IPR021109 - Aspartic peptidase domain superfamily IPR036875 - Zinc finger, CCHC-type superfamily IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR043502 - DNA/RNA polymerase superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0035455.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]

0.0

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Query:  MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDPEKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVM
        MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDPEKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVM
Subjt:  MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDPEKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVM

Query:  NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIIASESDRCRRF
        NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIIASESDRCRRF
Subjt:  NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIIASESDRCRRF

Query:  ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
        ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
Subjt:  ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP

Query:  SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQG-------------------------GVVGRP
        SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQG                         GVVGRP
Subjt:  SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQG-------------------------GVVGRP

Query:  RQQGKVYAMTQQEVEDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLE
        RQQGKVYAMTQQEVEDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLE
Subjt:  RQQGKVYAMTQQEVEDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLE

Query:  LQRLDVILGMDFLFAHYASMDCHRKEVVFRKPGFAEVVFR-----------------------------------ERKLKPEDVPVVKEFLDVFPDDLSG
        LQRLDVILGMDFLFAHYASMDCHRKEVVFRKPGFAEVVFR                                     KLKPEDVPVVKEFLDVFPDDLSG
Subjt:  LQRLDVILGMDFLFAHYASMDCHRKEVVFRKPGFAEVVFR-----------------------------------ERKLKPEDVPVVKEFLDVFPDDLSG

Query:  LPPDREIEFTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLR
        LPPDREIEFTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLR
Subjt:  LPPDREIEFTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLR

Query:  GAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDI
        GAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDI
Subjt:  GAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDI

KAA0041108.1 reverse transcriptase [Cucumis melo var. makuwa]

0.0

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Query:  MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDPEKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVM
        MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDPEKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVM
Subjt:  MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDPEKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVM

Query:  NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIIASESDRCRRF
        NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIIASESDRCRRF
Subjt:  NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIIASESDRCRRF

Query:  ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
        ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
Subjt:  ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP

Query:  SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQG-------------------------GVVGRP
        SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQG                         GVVGRP
Subjt:  SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQG-------------------------GVVGRP

Query:  RQQGKVYAMTQQEVEDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLE
        RQQGKVYAMTQQEVEDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLE
Subjt:  RQQGKVYAMTQQEVEDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLE

Query:  LQRLDVILGMDFLFAHYASMDCHRKEVVFRKPGFAEVVFR-----------------------------------ERKLKPEDVPVVKEFLDVFPDDLSG
        LQRLDVILGMDFLFAHYASMDCHRKEVVFRKPGFAEVVFR                                     KLKPEDVPVVKEFLDVFPDDLSG
Subjt:  LQRLDVILGMDFLFAHYASMDCHRKEVVFRKPGFAEVVFR-----------------------------------ERKLKPEDVPVVKEFLDVFPDDLSG

Query:  LPPDREIEFTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLR
        LPPDREIEFTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLR
Subjt:  LPPDREIEFTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLR

Query:  GAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDI
        GAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDI
Subjt:  GAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDI

KAA0056684.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]

0.0

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Query:  MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDPEKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVM
        MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDPEKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVM
Subjt:  MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDPEKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVM

Query:  NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIIASESDRCRRF
        NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIIASESDRCRRF
Subjt:  NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIIASESDRCRRF

Query:  ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
        ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
Subjt:  ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP

Query:  SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQG-------------------------GVVGRP
        SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQG                         GVVGRP
Subjt:  SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQG-------------------------GVVGRP

Query:  RQQGKVYAMTQQEVEDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLE
        RQQGKVYAMTQQEVEDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLE
Subjt:  RQQGKVYAMTQQEVEDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLE

Query:  LQRLDVILGMDFLFAHYASMDCHRKEVVFRKPGFAEVVFR-----------------------------------ERKLKPEDVPVVKEFLDVFPDDLSG
        LQRLDVILGMDFLFAHYASMDCHRKEVVFRKPGFAEVVFR                                     KLKPEDVPVVKEFLDVFPDDLSG
Subjt:  LQRLDVILGMDFLFAHYASMDCHRKEVVFRKPGFAEVVFR-----------------------------------ERKLKPEDVPVVKEFLDVFPDDLSG

Query:  LPPDREIEFTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLR
        LPPDREIEFTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLR
Subjt:  LPPDREIEFTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLR

Query:  GAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDI
        GAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDI
Subjt:  GAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDI

TYK06334.1 putative polyprotein [Cucumis melo var. makuwa]

0.0

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Query:  MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDPEKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVM
        MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDPEKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVM
Subjt:  MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDPEKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVM

Query:  NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIIASESDRCRRF
        NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIIASESDRCRRF
Subjt:  NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIIASESDRCRRF

Query:  ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
        ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
Subjt:  ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP

Query:  SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQG-------------------------GVVGRP
        SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQG                         GVVGRP
Subjt:  SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQG-------------------------GVVGRP

Query:  RQQGKVYAMTQQEVEDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLE
        RQQGKVYAMTQQEVEDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLE
Subjt:  RQQGKVYAMTQQEVEDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLE

Query:  LQRLDVILGMDFLFAHYASMDCHRKEVVFRKPGFAEVVFR-----------------------------------ERKLKPEDVPVVKEFLDVFPDDLSG
        LQRLDVILGMDFLFAHYASMDCHRKEVVFRKPGFAEVVFR                                     KLKPEDVPVVKEFLDVFPDDLSG
Subjt:  LQRLDVILGMDFLFAHYASMDCHRKEVVFRKPGFAEVVFR-----------------------------------ERKLKPEDVPVVKEFLDVFPDDLSG

Query:  LPPDREIEFTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLR
        LPPDREIEFTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLR
Subjt:  LPPDREIEFTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLR

Query:  GAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDI
        GAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDI
Subjt:  GAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDI

TYK27507.1 reverse transcriptase [Cucumis melo var. makuwa]

0.0

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Query:  MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDPEKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVM
        MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDPEKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVM
Subjt:  MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDPEKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVM

Query:  NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIIASESDRCRRF
        NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIIASESDRCRRF
Subjt:  NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIIASESDRCRRF

Query:  ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
        ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
Subjt:  ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP

Query:  SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQG-------------------------GVVGRP
        SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQG                         GVVGRP
Subjt:  SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQG-------------------------GVVGRP

Query:  RQQGKVYAMTQQEVEDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLE
        RQQGKVYAMTQQEVEDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLE
Subjt:  RQQGKVYAMTQQEVEDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLE

Query:  LQRLDVILGMDFLFAHYASMDCHRKEVVFRKPGFAEVVFR-----------------------------------ERKLKPEDVPVVKEFLDVFPDDLSG
        LQRLDVILGMDFLFAHYASMDCHRKEVVFRKPGFAEVVFR                                     KLKPEDVPVVKEFLDVFPDDLSG
Subjt:  LQRLDVILGMDFLFAHYASMDCHRKEVVFRKPGFAEVVFR-----------------------------------ERKLKPEDVPVVKEFLDVFPDDLSG

Query:  LPPDREIEFTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLR
        LPPDREIEFTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLR
Subjt:  LPPDREIEFTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLR

Query:  GAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDI
        GAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDI
Subjt:  GAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDI

TrEMBL top hits

e value

%identity

Alignment

A0A5A7T1Y5 Reverse transcriptase

0.0e+00

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Query:  MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDPEKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVM
        MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDPEKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVM
Subjt:  MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDPEKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVM

Query:  NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIIASESDRCRRF
        NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIIASESDRCRRF
Subjt:  NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIIASESDRCRRF

Query:  ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
        ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
Subjt:  ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP

Query:  SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQG-------------------------GVVGRP
        SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQG                         GVVGRP
Subjt:  SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQG-------------------------GVVGRP

Query:  RQQGKVYAMTQQEVEDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLE
        RQQGKVYAMTQQEVEDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLE
Subjt:  RQQGKVYAMTQQEVEDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLE

Query:  LQRLDVILGMDFLFAHYASMDCHRKEVVFRKPGFAEVVFR-----------------------------------ERKLKPEDVPVVKEFLDVFPDDLSG
        LQRLDVILGMDFLFAHYASMDCHRKEVVFRKPGFAEVVFR                                     KLKPEDVPVVKEFLDVFPDDLSG
Subjt:  LQRLDVILGMDFLFAHYASMDCHRKEVVFRKPGFAEVVFR-----------------------------------ERKLKPEDVPVVKEFLDVFPDDLSG

Query:  LPPDREIEFTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLR
        LPPDREIEFTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLR
Subjt:  LPPDREIEFTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLR

Query:  GAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDI
        GAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDI
Subjt:  GAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDI

A0A5A7U2V7 Reverse transcriptase

0.0e+00

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Query:  MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDPEKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVM
        MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDPEKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVM
Subjt:  MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDPEKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVM

Query:  NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIIASESDRCRRF
        NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIIASESDRCRRF
Subjt:  NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIIASESDRCRRF

Query:  ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
        ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
Subjt:  ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP

Query:  SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQG-------------------------GVVGRP
        SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQG                         GVVGRP
Subjt:  SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQG-------------------------GVVGRP

Query:  RQQGKVYAMTQQEVEDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLE
        RQQGKVYAMTQQEVEDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLE
Subjt:  RQQGKVYAMTQQEVEDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLE

Query:  LQRLDVILGMDFLFAHYASMDCHRKEVVFRKPGFAEVVFR-----------------------------------ERKLKPEDVPVVKEFLDVFPDDLSG
        LQRLDVILGMDFLFAHYASMDCHRKEVVFRKPGFAEVVFR                                     KLKPEDVPVVKEFLDVFPDDLSG
Subjt:  LQRLDVILGMDFLFAHYASMDCHRKEVVFRKPGFAEVVFR-----------------------------------ERKLKPEDVPVVKEFLDVFPDDLSG

Query:  LPPDREIEFTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLR
        LPPDREIEFTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLR
Subjt:  LPPDREIEFTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLR

Query:  GAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDI
        GAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDI
Subjt:  GAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDI

A0A5A7UNA3 Reverse transcriptase

0.0e+00

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Query:  MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDPEKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVM
        MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDPEKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVM
Subjt:  MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDPEKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVM

Query:  NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIIASESDRCRRF
        NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIIASESDRCRRF
Subjt:  NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIIASESDRCRRF

Query:  ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
        ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
Subjt:  ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP

Query:  SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQG-------------------------GVVGRP
        SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQG                         GVVGRP
Subjt:  SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQG-------------------------GVVGRP

Query:  RQQGKVYAMTQQEVEDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLE
        RQQGKVYAMTQQEVEDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLE
Subjt:  RQQGKVYAMTQQEVEDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLE

Query:  LQRLDVILGMDFLFAHYASMDCHRKEVVFRKPGFAEVVFR-----------------------------------ERKLKPEDVPVVKEFLDVFPDDLSG
        LQRLDVILGMDFLFAHYASMDCHRKEVVFRKPGFAEVVFR                                     KLKPEDVPVVKEFLDVFPDDLSG
Subjt:  LQRLDVILGMDFLFAHYASMDCHRKEVVFRKPGFAEVVFR-----------------------------------ERKLKPEDVPVVKEFLDVFPDDLSG

Query:  LPPDREIEFTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLR
        LPPDREIEFTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLR
Subjt:  LPPDREIEFTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLR

Query:  GAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDI
        GAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDI
Subjt:  GAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDI

A0A5D3BHI1 Reverse transcriptase

0.0e+00

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Query:  MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDPEKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVM
        MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDPEKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVM
Subjt:  MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDPEKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVM

Query:  NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIIASESDRCRRF
        NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIIASESDRCRRF
Subjt:  NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIIASESDRCRRF

Query:  ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
        ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
Subjt:  ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP

Query:  SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQG-------------------------GVVGRP
        SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQG                         GVVGRP
Subjt:  SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQG-------------------------GVVGRP

Query:  RQQGKVYAMTQQEVEDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLE
        RQQGKVYAMTQQEVEDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLE
Subjt:  RQQGKVYAMTQQEVEDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLE

Query:  LQRLDVILGMDFLFAHYASMDCHRKEVVFRKPGFAEVVFR-----------------------------------ERKLKPEDVPVVKEFLDVFPDDLSG
        LQRLDVILGMDFLFAHYASMDCHRKEVVFRKPGFAEVVFR                                     KLKPEDVPVVKEFLDVFPDDLSG
Subjt:  LQRLDVILGMDFLFAHYASMDCHRKEVVFRKPGFAEVVFR-----------------------------------ERKLKPEDVPVVKEFLDVFPDDLSG

Query:  LPPDREIEFTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLR
        LPPDREIEFTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLR
Subjt:  LPPDREIEFTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLR

Query:  GAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDI
        GAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDI
Subjt:  GAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDI

A0A5D3BS67 Reverse transcriptase

0.0e+00

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Query:  MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDPEKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVM
        MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDPEKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVM
Subjt:  MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDPEKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVM

Query:  NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIIASESDRCRRF
        NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIIASESDRCRRF
Subjt:  NCPEERKVRLATFLLQKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIIASESDRCRRF

Query:  ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
        ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP
Subjt:  ERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP

Query:  SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQG-------------------------GVVGRP
        SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQG                         GVVGRP
Subjt:  SQPIRSTVRSQPGQESIASTVRRIPCTSCGRNHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQG-------------------------GVVGRP

Query:  RQQGKVYAMTQQEVEDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLE
        RQQGKVYAMTQQEVEDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLE
Subjt:  RQQGKVYAMTQQEVEDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLE

Query:  LQRLDVILGMDFLFAHYASMDCHRKEVVFRKPGFAEVVFR-----------------------------------ERKLKPEDVPVVKEFLDVFPDDLSG
        LQRLDVILGMDFLFAHYASMDCHRKEVVFRKPGFAEVVFR                                     KLKPEDVPVVKEFLDVFPDDLSG
Subjt:  LQRLDVILGMDFLFAHYASMDCHRKEVVFRKPGFAEVVFR-----------------------------------ERKLKPEDVPVVKEFLDVFPDDLSG

Query:  LPPDREIEFTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLR
        LPPDREIEFTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLR
Subjt:  LPPDREIEFTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLR

Query:  GAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDI
        GAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDI
Subjt:  GAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDI

SwissProt top hits

e value

%identity

Alignment

P0CT41 Transposon Tf2-12 polyprotein

3.5e-31

36.36

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Query:  KPEDVPVVKEFLDVFPD-DLSGLP-PDREIEFTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQ
        +PE   + KEF D+  + +   LP P + +EF +EL      +    Y + P +++ +  ++ + +  G IR S +    PV+FV KK+GTLR+ +DY+ 
Subjt:  KPEDVPVVKEFLDVFPD-DLSGLP-PDREIEFTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQ

Query:  LNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDI
        LNK    N YPLP I+ L  +++G+ +F+K+DL+S YH ++VR+ D  K AFR   G +E+ VMP+G++ APA F   +N I     +  V+ ++DDI
Subjt:  LNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDI

P20825 Retrovirus-related Pol polyprotein from transposon 297

1.6e-31

41.72

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Query:  APISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKD-----GTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRS
        +PI    Y +A +   E++ Q+QE++++G IR S SP+ +P   V KK         R+ IDYR+LN++TI ++YP+P +D++  +L     F+ IDL  
Subjt:  APISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKD-----GTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRS

Query:  GYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDI
        G+HQ+++ E  I+KTAF T+ GHYE+  MPFGL NAPA F   MN I    L++  +V++DDI
Subjt:  GYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDI

P31843 RNA-directed DNA polymerase homolog

4.4e-34

61.11

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Query:  TLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQF
        +LR+CIDYR L KVTI+NKYP+PR+DDLFD+L  A  F+K+DLRSGY Q+++ + D  KT   TRYG +EFRVMPFGLTNA A F +LMN + + YLD F
Subjt:  TLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQF

Query:  VIVFIDDI
        V+V++DD+
Subjt:  VIVFIDDI

Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein

7.2e-37

42.63

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Query:  VVKEFLDVFPDDLSGLPPDREIEFTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRN
        +++  L   P D++ +P    ++  IE+ PG       PY +     +E+   +Q+L+D  +I PS SP  +PV+ V KKDGT RLC+DYR LNK TI +
Subjt:  VVKEFLDVFPDDLSGLPPDREIEFTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRN

Query:  KYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDI
         +PLPRID+L  ++  A +F+ +DL SGYHQ+ +   D  KTAF T  G YE+ VMPFGL NAP+ F   M   F     +FV V++DDI
Subjt:  KYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDI

Q99315 Transposon Ty3-G Gag-Pol polyprotein

7.2e-37

42.63

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Query:  VVKEFLDVFPDDLSGLPPDREIEFTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRN
        +++  L   P D++ +P    ++  IE+ PG       PY +     +E+   +Q+L+D  +I PS SP  +PV+ V KKDGT RLC+DYR LNK TI +
Subjt:  VVKEFLDVFPDDLSGLPPDREIEFTIELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRN

Query:  KYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDI
         +PLPRID+L  ++  A +F+ +DL SGYHQ+ +   D  KTAF T  G YE+ VMPFGL NAP+ F   M   F     +FV V++DDI
Subjt:  KYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDI

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCCACCACGTACTGGTAGACGACGCCGGCAGAATCAGGACGGGATGCAAGGTCCTACCCAAGGTCCATCTGTAGGGGAATCTAGTACCCTAGGAGTTCGAGGTGGTGC
AGGAAACGAGCAGTTTGCGAGAACAACACAGGAAATAGGAAGGACAGATAGAGCAGAGCCTAGTGATCCAGAAAAGGCATACGGAATTGAACGGCTGAAGAAGTTAGGGG
CTACAGTGTTTGAAGGTTCCACAGATCCAGCTGATGCAGAGAACTGGTTGAATATGCTTGAAAAGTGTTTTGATGTGATGAATTGTCCTGAGGAGCGAAAGGTTAGATTG
GCCACATTTTTGTTGCAAAAAGAGGCTGAAGGATGGTGGAAATCTATATTAGCAAGACGCAGTGATGCACGTGCTTTAGACTGGCAGACTTTTAGAGGCATCTTCGAAGA
TAAGTATTATCCCAGCACATACTGCGAAGCCAAGAGGGATGAATTTCTGGGGTTGAAACAAGGATCACTTTCAGTGGCTGAGTATGAGAGGAAGTATACCGAGCTTTCAC
GGTATGCTGACGTTATTATAGCTTCTGAGAGTGACAGGTGCCGAAGGTTTGAAAGAGGATTGCGTTTTGAAATACGTACCCCAGTTACAGCCATTGCTAAGTGGACGAAT
TTCTCTCAGTTAGTGGAGACTGCCCTTCGTGTGGAGCAGAGTATAACAGAAGAGAAATCGGCAGTGGAGCTTAGTCGTGGGACTTCAACAGCTAGTGGATTTAGAGGCCG
TGAGCAGCGGAGGTTCACGCCTGGGATAAATATTTCAAGCCGTCAAGATTTTAAGAATCGCTCTGGAGGCCAAGCATCGAGGAACGTGAGTTATGGTAGTGTTTTTCAGA
GACAGAGCCAGAGAATACCTAGTCAACCCATTAGATCAACAGTAAGATCGCAACCAGGTCAGGAGTCCATTGCTAGTACCGTCAGGCGAATACCATGCACGAGTTGTGGC
AGGAACCATCGGGGTCAGTGTTTGGTAGGTGCCGGTGTATGTTACCAGTGCGGACAGCCAGGACATTTTAAGAAAGATTGTCCGCAATTGAACATGACAGTTCAGAGAGA
TCAGGGAGGAGTTGTTGGAAGACCGAGGCAACAGGGAAAAGTCTATGCTATGACTCAACAAGAAGTAGAGGATGCACCAGACGTTATTACTGGTACGATTCTTATTTGTA
ATGTACCTGCAGATGTTTTATTTGATCCAGGTGCTACGCATTCCTTTGTTTCTAGTATATTTCTGACTAAGTTGAATAGGATGCTAGAGCCTTTATCTGAGGGGTTAGCT
ATATACACTCCAGTTGGTGACGTTTTACTTGTTAATGAGGTGTTACGTAATTGTGAAGTTTTAGTAGAAGGTATCAGTTTGCTAGTGGACTTGCTACCACTAGAGTTGCA
GAGGTTAGATGTAATTTTGGGAATGGATTTCTTATTTGCTCATTATGCATCTATGGATTGCCATAGGAAGGAAGTGGTTTTCAGAAAACCAGGCTTTGCTGAAGTGGTTT
TTAGAGAGAGAAAACTAAAGCCAGAAGATGTTCCTGTGGTGAAAGAGTTTCTTGATGTATTTCCAGATGATCTGTCAGGTTTGCCACCTGATAGAGAGATTGAGTTCACC
ATTGAATTATTACCAGGAACAGCACCTATTTCACAAGCCCCGTATAGAATGGCTCCAAGCGAGCTAAAAGAATTGAAGATGCAGTTACAGGAACTAGTTGACAAGGGATA
CATCAGGCCTAGTGTTTCGCCGTGGGGAGCACCAGTGCTTTTTGTGAAAAAGAAAGATGGTACCCTCAGATTATGTATTGACTATAGACAGTTAAACAAGGTTACAATAC
GTAACAAGTATCCTTTACCACGCATCGATGACTTATTTGATCAACTAAGGGGAGCAGCGTTGTTCTCTAAGATTGACTTAAGGTCAGGATACCACCAGTTGAAGGTTAGA
GAATCAGATATTGCTAAGACAGCATTTAGAACGAGGTATGGGCATTATGAGTTTCGAGTTATGCCATTCGGTTTAACGAATGCGCCAGCGGTTTTCATGGATCTCATGAA
CAGGATCTTCCATCGGTATTTAGATCAGTTTGTGATTGTGTTCATTGATGATATATAG

mRNA sequence

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Protein sequence

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MPPRTGRRRRQNQDGMQGPTQGPSVGESSTLGVRGGAGNEQFARTTQEIGRTDRAEPSDPEKAYGIERLKKLGATVFEGSTDPADAENWLNMLEKCFDVMNCPEERKVRL
ATFLLQKEAEGWWKSILARRSDARALDWQTFRGIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYERKYTELSRYADVIIASESDRCRRFERGLRFEIRTPVTAIAKWTN
FSQLVETALRVEQSITEEKSAVELSRGTSTASGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIPSQPIRSTVRSQPGQESIASTVRRIPCTSCG
RNHRGQCLVGAGVCYQCGQPGHFKKDCPQLNMTVQRDQGGVVGRPRQQGKVYAMTQQEVEDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLA
IYTPVGDVLLVNEVLRNCEVLVEGISLLVDLLPLELQRLDVILGMDFLFAHYASMDCHRKEVVFRKPGFAEVVFRERKLKPEDVPVVKEFLDVFPDDLSGLPPDREIEFT
IELLPGTAPISQAPYRMAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVR
ESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDI

IVF0000386 (gene) of Melon (IVF77) v1 genome