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IVF0000398 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0000398
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionprotein PXR1
Genome locationchr12:23912761..23913021
RNA-Seq ExpressionIVF0000398
SyntenyIVF0000398
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584261.1 hypothetical protein SDJN03_20193, partial [Cucurbita argyrosperma subsp. sororia]5.50e-2271Show/hide
Query:  MGETSEEKHEGKVEKKEKK-DKEKHGE-----------GEDEEK----KKKKKEKNPADKKDPTKLRQKLEKLEAKMQALAVKKEEILKLLHEAEQNPPP
        MG TSEEKHEGKVEKKEKK DKEKH E           G+D++K    KK+KK+K+PAD KDP KLRQKLEKLEAKMQALAVKKEEILKL+HEAEQN  P
Subjt:  MGETSEEKHEGKVEKKEKK-DKEKHGE-----------GEDEEK----KKKKKEKNPADKKDPTKLRQKLEKLEAKMQALAVKKEEILKLLHEAEQNPPP

KAG7019857.1 hypothetical protein SDJN02_18822, partial [Cucurbita argyrosperma subsp. argyrosperma]1.43e-2269.61Show/hide
Query:  MGETSEEKHEGKVEKKEKK-DKEKHGEGEDEE-----------------KKKKKKEKNPADKKDPTKLRQKLEKLEAKMQALAVKKEEILKLLHEAEQNP
        MG TSEEKHEGKVEKKEKK DKEKH E E+EE                 +KK+KK+K+PAD KDP KLRQKLEKLEAKMQALAVKKEEILKL+HEAEQN 
Subjt:  MGETSEEKHEGKVEKKEKK-DKEKHGEGEDEE-----------------KKKKKKEKNPADKKDPTKLRQKLEKLEAKMQALAVKKEEILKLLHEAEQNP

Query:  PP
         P
Subjt:  PP

XP_008437610.1 PREDICTED: protein PXR1 [Cucumis melo]1.15e-41100Show/hide
Query:  MGETSEEKHEGKVEKKEKKDKEKHGEGEDEEKKKKKKEKNPADKKDPTKLRQKLEKLEAKMQALAVKKEEILKLLHEAEQNPPPPS
        MGETSEEKHEGKVEKKEKKDKEKHGEGEDEEKKKKKKEKNPADKKDPTKLRQKLEKLEAKMQALAVKKEEILKLLHEAEQNPPPPS
Subjt:  MGETSEEKHEGKVEKKEKKDKEKHGEGEDEEKKKKKKEKNPADKKDPTKLRQKLEKLEAKMQALAVKKEEILKLLHEAEQNPPPPS

XP_022137487.1 nucleolar protein 58 [Momordica charantia]1.06e-2371.72Show/hide
Query:  MGETSEEKHEG----KVEKKEKKDKEKH-----GEGEDEEKKKKKKEKNPADKKDPTKLRQKLEKLEAKMQALAVKKEEILKLLHEAEQN----PPPPS
        MGE SEEKHEG    K EKKEKKDKEKH     GEGE +++KK+KK+KNP DKKDPTKLRQKLEKLE KM+ LA+KKEE+LKLL EAEQN    PPPPS
Subjt:  MGETSEEKHEG----KVEKKEKKDKEKH-----GEGEDEEKKKKKKEKNPADKKDPTKLRQKLEKLEAKMQALAVKKEEILKLLHEAEQN----PPPPS

XP_022923831.1 protein PXR1 [Cucurbita moschata]3.20e-2170Show/hide
Query:  MGETSEEKHEGKVEKKEKK-DKEKHGEGEDEEKKKK---------------KKEKNPADKKDPTKLRQKLEKLEAKMQALAVKKEEILKLLHEAEQNPPP
        MG TSEEKHEGKVEKKEKK DKEKH E ED+  KKK               KK+K+PAD KDP KLRQKLEKLE KMQALAVKKEEILKL+HEAEQN  P
Subjt:  MGETSEEKHEGKVEKKEKK-DKEKHGEGEDEEKKKK---------------KKEKNPADKKDPTKLRQKLEKLEAKMQALAVKKEEILKLLHEAEQNPPP

TrEMBL top hitse value%identityAlignment
A0A0A0LQQ8 Uncharacterized protein3.3e-2490.11Show/hide
Query:  MGETSEEKHEGKV---EKKEKKDKEKHG-EGEDEE-KKKKKKEKNPADKKDPTKLRQKLEKLEAKMQALAVKKEEILKLLHEAEQNPPPPS
        MGETSEEKHEG+V   EKKEKKDKEKHG EGEDEE KKKKKKEK+PADKKDPTKLRQKLEKLE KMQALAVKKEEILKLLHEAEQNPPP S
Subjt:  MGETSEEKHEGKV---EKKEKKDKEKHG-EGEDEE-KKKKKKEKNPADKKDPTKLRQKLEKLEAKMQALAVKKEEILKLLHEAEQNPPPPS

A0A1S3AV24 protein PXR14.8e-31100Show/hide
Query:  MGETSEEKHEGKVEKKEKKDKEKHGEGEDEEKKKKKKEKNPADKKDPTKLRQKLEKLEAKMQALAVKKEEILKLLHEAEQNPPPPS
        MGETSEEKHEGKVEKKEKKDKEKHGEGEDEEKKKKKKEKNPADKKDPTKLRQKLEKLEAKMQALAVKKEEILKLLHEAEQNPPPPS
Subjt:  MGETSEEKHEGKVEKKEKKDKEKHGEGEDEEKKKKKKEKNPADKKDPTKLRQKLEKLEAKMQALAVKKEEILKLLHEAEQNPPPPS

A0A6J1C8D9 nucleolar protein 581.4e-1771.72Show/hide
Query:  MGETSEEKHEG----KVEKKEKKDKEKH-----GEGEDEEKKKKKKEKNPADKKDPTKLRQKLEKLEAKMQALAVKKEEILKLLHEAEQN----PPPPS
        MGE SEEKHEG    K EKKEKKDKEKH     GEGE +++KK+KK+KNP DKKDPTKLRQKLEKLE KM+ LA+KKEE+LKLL EAEQN    PPPPS
Subjt:  MGETSEEKHEG----KVEKKEKKDKEKH-----GEGEDEEKKKKKKEKNPADKKDPTKLRQKLEKLEAKMQALAVKKEEILKLLHEAEQN----PPPPS

A0A6J1E7S6 protein PXR17.4e-1670Show/hide
Query:  MGETSEEKHEGKVEKKE-KKDKEKHGEGEDEEKKKK---------------KKEKNPADKKDPTKLRQKLEKLEAKMQALAVKKEEILKLLHEAEQNPPP
        MG TSEEKHEGKVEKKE KKDKEKH E ED+  KKK               KK+K+PAD KDP KLRQKLEKLE KMQALAVKKEEILKL+HEAEQN  P
Subjt:  MGETSEEKHEGKVEKKE-KKDKEKHGEGEDEEKKKK---------------KKEKNPADKKDPTKLRQKLEKLEAKMQALAVKKEEILKLLHEAEQNPPP

A0A6J1K499 protein PXR11.7e-1569.31Show/hide
Query:  MGETSEEKHEGKVEKKEKKD--------KEKHGEGEDEE----KKKKKKEKNPADKKDPTKLRQKLEKLEAKMQALAVKKEEILKLLHEAEQN---PPPP
        MG  SEEKHE KVEKKEKK         KEK G+ +D+E    +KK+KK K+PADKKDPTKLRQKLEKLE KMQALAVKKEE+LKLLHEAEQN    PPP
Subjt:  MGETSEEKHEGKVEKKEKKD--------KEKHGEGEDEE----KKKKKKEKNPADKKDPTKLRQKLEKLEAKMQALAVKKEEILKLLHEAEQN---PPPP

Query:  S
        S
Subjt:  S

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G62750.1 unknown protein1.3e-0947.32Show/hide
Query:  MGETSE--------EKHEGKVEKKEKKDKEKH---------------GEGEDEEKKKK------KKEKNPADKKDPTKLRQKLEKLEAKMQALAVKKEEI
        MGET E        E+   K EK EKK+K+K                 EGED+EKK K      KKEKNP DKKDP KL+ KL+K+E K+QA+ +KK+EI
Subjt:  MGETSE--------EKHEGKVEKKEKKDKEKH---------------GEGEDEEKKKK------KKEKNPADKKDPTKLRQKLEKLEAKMQALAVKKEEI

Query:  LKLLHEAEQNPP
        +KL+H+AEQ  P
Subjt:  LKLLHEAEQNPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGAAACGTCAGAAGAGAAGCACGAGGGTAAGGTAGAGAAGAAGGAGAAGAAAGATAAAGAGAAGCATGGAGAAGGAGAAGATGAAGAGAAAAAGAAGAAGAAGAA
AGAGAAAAACCCTGCAGATAAGAAAGATCCTACAAAACTAAGACAAAAGCTTGAGAAGCTTGAAGCCAAAATGCAGGCTTTGGCTGTAAAGAAAGAAGAGATCTTGAAAT
TGCTCCATGAAGCTGAACAGAATCCACCACCTCCCTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGAAACGTCAGAAGAGAAGCACGAGGGTAAGGTAGAGAAGAAGGAGAAGAAAGATAAAGAGAAGCATGGAGAAGGAGAAGATGAAGAGAAAAAGAAGAAGAAGAA
AGAGAAAAACCCTGCAGATAAGAAAGATCCTACAAAACTAAGACAAAAGCTTGAGAAGCTTGAAGCCAAAATGCAGGCTTTGGCTGTAAAGAAAGAAGAGATCTTGAAAT
TGCTCCATGAAGCTGAACAGAATCCACCACCTCCCTCTTGA
Protein sequenceShow/hide protein sequence
MGETSEEKHEGKVEKKEKKDKEKHGEGEDEEKKKKKKEKNPADKKDPTKLRQKLEKLEAKMQALAVKKEEILKLLHEAEQNPPPPS