CuGenDBv2

Gene ID	IVF0000407
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Protein Ycf2
Genome location	chr02:20108992..20110242
RNA-Seq Expression	IVF0000407
Synteny	IVF0000407
Gene Ontology terms	GO:0110165 - cellular anatomical structure (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAF1855819.1 hypothetical protein Lal_00045181 [Lupinus albus]

7.30e-157

62.74

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Query:  MSPCIIWIPNIHDLYVTELNYLSLGLLVNYLSGDFERCSTTNILVIASTYISQKVDLALIALNKLNTCIKIRR------------------FHLEKKMFH
        MSPCIIWIPNIHDL V E NYLSLGLL+NYLSGD ERCST NILVIAST+I QKVD ALIA NKLNTCIKIRR                  FHLEKKMFH
Subjt:  MSPCIIWIPNIHDLYVTELNYLSLGLLVNYLSGDFERCSTTNILVIASTYISQKVDLALIALNKLNTCIKIRR------------------FHLEKKMFH

Query:  TNGFGSITMGSNVRDIVALTNEALSIR------------------------------------------RAVAQNVLLSNCSIDPISIYMMKKSCNEEGS
        TNGFGSITMGSNVRD+VALTNEALSI                                           RAV+QNVLLSNCSIDPISIYM KKSCNE  S
Subjt:  TNGFGSITMGSNVRDIVALTNEALSIR------------------------------------------RAVAQNVLLSNCSIDPISIYMMKKSCNEEGS

Query:  YLYNWYFELETSMKELTILLY----------------------------GLVENNYDLVHGLLEVEGALLGSSQIEKDCSRFDKDQVTLLLRLGLMNPLD
        YLY WYFEL TSMK+LTILLY                            GLVEN+ DLVHGLLEVEGAL+GSS+ EKDCS+FD D+VTLLLR    NPL+
Subjt:  YLYNWYFELETSMKELTILLY----------------------------GLVENNYDLVHGLLEVEGALLGSSQIEKDCSRFDKDQVTLLLRLGLMNPLD

Query:  MIQNGY----------------------FLNLQQIEENLFNHIVWAPRIWRPWGFLFNCIERLNELGFPYWARSFRGKQIIYDEDDELQENDSEFLQSGT
        MIQNG                        L+ QQIEE+LFNHIVWAPR WRPWGFLF+CIER NELGFPYWA SFRGKQIIYDE+DELQENDSEFLQ GT
Subjt:  MIQNGY----------------------FLNLQQIEENLFNHIVWAPRIWRPWGFLFNCIERLNELGFPYWARSFRGKQIIYDEDDELQENDSEFLQSGT

Query:  MQYQTRDRSFKEQGFF
        +QYQTRDRS KEQGFF
Subjt:  MQYQTRDRSFKEQGFF

QGA86655.1 hypothetical protein RF2, partial [Entada rheedei]

1.37e-155

62.26

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Query:  MSPCIIWIPNIHDLYVTELNYLSLGLLVNYLSGDFERCSTTNILVIASTYISQKVDLALIALNKLNTCIKIRR------------------FHLEKKMFH
        MSPCIIWIPNIHDL V E NYLSLGLLVNYLS D ERCST NILVIAST+I QKVD ALIA NKLNTCIKIRR                  FHLE KMFH
Subjt:  MSPCIIWIPNIHDLYVTELNYLSLGLLVNYLSGDFERCSTTNILVIASTYISQKVDLALIALNKLNTCIKIRR------------------FHLEKKMFH

Query:  TNGFGSITMGSNVRDIVALTNEALSIR------------------------------------------RAVAQNVLLSNCSIDPISIYMMKKSCNEEGS
        TNGF SITMGSNVRD+VALTNEALSI                                           RAV+QNVLLSNCSIDPISIYM KKSCNE  S
Subjt:  TNGFGSITMGSNVRDIVALTNEALSIR------------------------------------------RAVAQNVLLSNCSIDPISIYMMKKSCNEEGS

Query:  YLYNWYFELETSMKELTILLY----------------------------GLVENNYDLVHGLLEVEGALLGSSQIEKDCSRFDKDQVTLLLRLGLMNPLD
        YLY WYFEL TSMK+ TILLY                            GLVEN+ DLVHGLLEVEGAL+GSS+ EKDCS+FD D+VTLLLR    NPL+
Subjt:  YLYNWYFELETSMKELTILLY----------------------------GLVENNYDLVHGLLEVEGALLGSSQIEKDCSRFDKDQVTLLLRLGLMNPLD

Query:  MIQNGY----------------------FLNLQQIEENLFNHIVWAPRIWRPWGFLFNCIERLNELGFPYWARSFRGKQIIYDEDDELQENDSEFLQSGT
        MIQNG                        L+ QQIEE+LFNHIVWAPRIWRPWG LF+CIER NELGFPYWARSFRGK+IIYDE+DELQENDSEFLQSGT
Subjt:  MIQNGY----------------------FLNLQQIEENLFNHIVWAPRIWRPWGFLFNCIERLNELGFPYWARSFRGKQIIYDEDDELQENDSEFLQSGT

Query:  MQYQTRDRSFKEQGFF
        +QYQTRDRS KEQGFF
Subjt:  MQYQTRDRSFKEQGFF

TAJ03986.1 AAA family ATPase [Marinilabiliaceae bacterium JC017]

4.90e-153

62.02

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Query:  MSPCIIWIPNIHDLYVTELNYLSLGLLVNYLSGDFERCSTTNILVIASTYISQKVDLALIALNKLNTCIKIRR------------------FHLEKKMFH
        MSPCIIWIPNIHDL V E NYLSLGLLVNYLS D ERCST NILVIAST+I QKVD ALIA NKLNTCIKIRR                  FHLEKKMFH
Subjt:  MSPCIIWIPNIHDLYVTELNYLSLGLLVNYLSGDFERCSTTNILVIASTYISQKVDLALIALNKLNTCIKIRR------------------FHLEKKMFH

Query:  TNGFGSITMGSNVRDIVALTNEALSIR------------------------------------------RAVAQNVLLSNCSIDPISIYMMKKSCNEEGS
        TN FGSI+MGSN RD+VALTNEALSI                                           RAVAQNVLLSNC IDPISIYM KKSCNE  S
Subjt:  TNGFGSITMGSNVRDIVALTNEALSIR------------------------------------------RAVAQNVLLSNCSIDPISIYMMKKSCNEEGS

Query:  YLYNWYFELETSMKELTILLY----------------------------GLVENNYDLVHGLLEVEGALLGSSQIEKDCSRFDKDQVTLLLRLGLMNPLD
        YLY WYFEL TSMK+LTILLY                            GLVEN+ DLVHGLLEVEGAL+GSS+ EKDCS+FD D+VTL LR    NPLD
Subjt:  YLYNWYFELETSMKELTILLY----------------------------GLVENNYDLVHGLLEVEGALLGSSQIEKDCSRFDKDQVTLLLRLGLMNPLD

Query:  MIQNGYF----------------------LNLQQIEENLFNHIVWAPRIWRPWGFLFNCIERLNELGFPYWARSFRGKQIIYDEDDELQENDSEFLQSGT
        MIQNG                        L+  QIEE+LFNHIVWAPRIWRPWGFLF+CIER NELGFPYWARSFRGK+IIYDE+DELQENDSEFLQSGT
Subjt:  MIQNGYF----------------------LNLQQIEENLFNHIVWAPRIWRPWGFLFNCIERLNELGFPYWARSFRGKQIIYDEDDELQENDSEFLQSGT

Query:  MQYQTRDRSFKEQGFF
        +QYQTR+RS KEQGFF
Subjt:  MQYQTRDRSFKEQGFF

WP_217497598.1 DUF825 domain-containing protein, partial [Candidatus Frankia meridionalis]

6.66e-157

63.7

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Query:  MSPCIIWIPNIHDLYVTELNYLSLGLLVNYLSGDFERCSTTNILVIASTYISQKVDLALIALNKLNTCIKIRR------------------FHLEKKMFH
        MSPCIIWIPNIHDL V E NYLSLGLLVNYLS D ERCST NILVIAST+I QKVD ALIA NKLNTCIKIRR                  FHLEKKMFH
Subjt:  MSPCIIWIPNIHDLYVTELNYLSLGLLVNYLSGDFERCSTTNILVIASTYISQKVDLALIALNKLNTCIKIRR------------------FHLEKKMFH

Query:  TNGFGSITMGSNVRDIVALTNEALSIR------------------------------------------RAVAQNVLLSNCSIDPISIYMMKKSCNEEGS
        TNGFGSITMGSNVRD+VALTNEALSI                                           RAVAQNVLLSNCSIDPISIYM KKSCNE GS
Subjt:  TNGFGSITMGSNVRDIVALTNEALSIR------------------------------------------RAVAQNVLLSNCSIDPISIYMMKKSCNEEGS

Query:  YLYNWYFELETSMKELTILLY----------------------------GLVENNYDLVHGLLEVEGALLGSSQIEKDCSRFDKDQVTLLLRLGLMNPLD
        YLY WYFEL TSMK+LTILLY                            GLVEN+ DLVHGLLEVEGAL+GSS+ EKDCSRFD D+VTLLLR    NPLD
Subjt:  YLYNWYFELETSMKELTILLY----------------------------GLVENNYDLVHGLLEVEGALLGSSQIEKDCSRFDKDQVTLLLRLGLMNPLD

Query:  MIQNGY----------------------FLNLQQIEENLFNHIVWAPRIWRPWGFLFNCIERLNELGFPYWARSFRGKQIIYDEDDELQENDSEFLQSGT
        M+QNG                        L+ QQIEE+LFNHIVWAPRIWRPWGFLF+CIER N LGFPYWARSFRGK+IIYDE+DELQENDSEFLQSGT
Subjt:  MIQNGY----------------------FLNLQQIEENLFNHIVWAPRIWRPWGFLFNCIERLNELGFPYWARSFRGKQIIYDEDDELQENDSEFLQSGT

Query:  MQYQTRDRSFKEQGFF
        +QYQTRDRS KEQGFF
Subjt:  MQYQTRDRSFKEQGFF

YP_009526531.1 hypothetical protein [Ammopiptanthus mongolicus]

5.68e-154

63.22

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Query:  MSPCIIWIPNIHDLYVTELNYLSLGLLVNYLSGDFERCSTTNILVIASTYISQKVDLALIALNKLNTCIKIRR------------------FHLEKKMFH
        MSPCIIWIPNIHDL V E NYLSLGLLVNYLS D ERCST NILVIAST+I QKVD ALIA NKLNTCIKIRR                  FHLEKKMFH
Subjt:  MSPCIIWIPNIHDLYVTELNYLSLGLLVNYLSGDFERCSTTNILVIASTYISQKVDLALIALNKLNTCIKIRR------------------FHLEKKMFH

Query:  TNGFGSITMGSNVRDIVALTNEALSIR------------------------------------------RAVAQNVLLSNCSIDPISIYMMKKSCNEEGS
        TNGFGSITMGSNVRD+VALTNEALSI                                           RAV+QNVLLSNCSIDPISIYM KKSCNE  S
Subjt:  TNGFGSITMGSNVRDIVALTNEALSIR------------------------------------------RAVAQNVLLSNCSIDPISIYMMKKSCNEEGS

Query:  YLYNWYFELETSMKELTILLY----------------------------GLVENNYDLVHGLLEVEGALLGSSQIEKDCSRFDKDQVTLLLRLGLMNPLD
        YLY WYFEL TSMK+LTILLY                            GLVEN+ DLVHGLLEVEGAL+GSS+ EKDCS+FD D+VTLLLR    NPL+
Subjt:  YLYNWYFELETSMKELTILLY----------------------------GLVENNYDLVHGLLEVEGALLGSSQIEKDCSRFDKDQVTLLLRLGLMNPLD

Query:  MIQNGY----------------------FLNLQQIEENLFNHIVWAPRIWRPWGFLFNCIERLNELGFPYWARSFRGKQIIYDEDDELQENDSEFLQSGT
        MIQNG                        L+ QQIEE+LFNHIVWAPRIWRPWGFLF+CIER NELGFPYWARSFRGK+IIYDE+DELQENDSEFLQ GT
Subjt:  MIQNGY----------------------FLNLQQIEENLFNHIVWAPRIWRPWGFLFNCIERLNELGFPYWARSFRGKQIIYDEDDELQENDSEFLQSGT

Query:  MQYQTRDRSFKEQGFF
        MQYQTRDRS KEQGFF
Subjt:  MQYQTRDRSFKEQGFF

TrEMBL top hits

e value

%identity

Alignment

A0A249RXM5 Protein Ycf2

5.5e-130

64.18

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Query:  MSPCIIWIPNIHDLYVTELNYLSLGLLVNYLSGDFERCSTTNILVIASTYISQKVDLALIALNKLNTCIKIRR------------------FHLEKKMFH
        MSPCIIWIPNIH+LYVTE NYLSLGLLVNYLS DFERCSTTNILVIAST+I QKVD ALIA NKLNTCIKIRR                  F LEKKMFH
Subjt:  MSPCIIWIPNIHDLYVTELNYLSLGLLVNYLSGDFERCSTTNILVIASTYISQKVDLALIALNKLNTCIKIRR------------------FHLEKKMFH

Query:  TNGFGSITMGSNVRDIVALTNEALSIR------------------------------------------RAVAQNVLLSNCSIDPISIYMMKKSCNEEGS
        TNGFGSITMGSNVRD+VALTNEALSI                                           RAVAQNVLLSNCSIDPISIYM KKSCNE GS
Subjt:  TNGFGSITMGSNVRDIVALTNEALSIR------------------------------------------RAVAQNVLLSNCSIDPISIYMMKKSCNEEGS

Query:  YLYNWYFELETSMKELTILL--------------------------YGLVENNYDLVHGLLEVEGALLGSSQIEKDCSRFDKDQVTLLLRLGLMNPLDMI
        YLYNWYFEL+TSMK+L ILL                          YGLVEN+ DLVHGLLEVEGALLGSS+ EKDCSRFD D+VTLLLR    NPLDMI
Subjt:  YLYNWYFELETSMKELTILL--------------------------YGLVENNYDLVHGLLEVEGALLGSSQIEKDCSRFDKDQVTLLLRLGLMNPLDMI

Query:  QNG-------YFLNLQ-----------------QIEENLFNHIVWAPRIWRPWGFLFNCIERLNELGFPYWARSFRGKQIIYDEDDELQENDSEFLQSGT
        QNG        FL  Q                 +IEE+ FNHIVWAPRIWRPWGFLF+CI+RLNELGFPYWARSFRGK+IIYD++DELQEND EFLQSGT
Subjt:  QNG-------YFLNLQ-----------------QIEENLFNHIVWAPRIWRPWGFLFNCIERLNELGFPYWARSFRGKQIIYDEDDELQENDSEFLQSGT

Query:  MQYQTRDRSFKEQGFF
        +QYQTRDRS KEQGFF
Subjt:  MQYQTRDRSFKEQGFF

A0A6H0EQH0 Protein Ycf2

5.5e-130

64.42

Show/hide

Query:  MSPCIIWIPNIHDLYVTELNYLSLGLLVNYLSGDFERCSTTNILVIASTYISQKVDLALIALNKLNTCIKIRR------------------FHLEKKMFH
        MSPCIIWIPNIHDL V E NYLSLGLLVNYLS D ERCST NILVIAST+I QKVD ALIA NKLNTCIKIRR                  FHLEKKMFH
Subjt:  MSPCIIWIPNIHDLYVTELNYLSLGLLVNYLSGDFERCSTTNILVIASTYISQKVDLALIALNKLNTCIKIRR------------------FHLEKKMFH

Query:  TNGFGSITMGSNVRDIVALTNEALSIR------------------------------------------RAVAQNVLLSNCSIDPISIYMMKKSCNEEGS
        TNGFGSITMGSNVRD+VALTNEALSI                                           RAVAQNVLLSNCSIDPISIYM KKSCNE GS
Subjt:  TNGFGSITMGSNVRDIVALTNEALSIR------------------------------------------RAVAQNVLLSNCSIDPISIYMMKKSCNEEGS

Query:  YLYNWYFELETSMKELTILL----------------------------YGLVENNYDLVHGLLEVEGALLGSSQIEKDCSRFDKDQVTLLLRLGLMNPLD
        YLY WYFEL TSMK+LTILL                            YGLVEN+ DLVHGLLEVEGALLGSS+ EKDCSRFD D+VTLLLR    NPLD
Subjt:  YLYNWYFELETSMKELTILL----------------------------YGLVENNYDLVHGLLEVEGALLGSSQIEKDCSRFDKDQVTLLLRLGLMNPLD

Query:  MIQNGY----------------------FLNLQQIEENLFNHIVWAPRIWRPWGFLFNCIERLNELGFPYWARSFRGKQIIYDEDDELQENDSEFLQSGT
        MIQNG                        L+ QQIEE+LFNHIVWAPRIWRPWGFLF+CIER NELGFPYWARSFRGK+IIYDE+DELQENDSEFLQSGT
Subjt:  MIQNGY----------------------FLNLQQIEENLFNHIVWAPRIWRPWGFLFNCIERLNELGFPYWARSFRGKQIIYDEDDELQENDSEFLQSGT

Query:  MQYQTRDRSFKEQGFF
        +QYQTRDRS KEQGFF
Subjt:  MQYQTRDRSFKEQGFF

A0A6H0EVL1 Protein Ycf2

5.5e-130

64.11

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Query:  MSPCIIWIPNIHDLYVTELNYLSLGLLVNYLSGDFERCSTTNILVIASTYISQKVDLALIALNKLNTCIKIRR------------------FHLEKKMFH
        MSPCIIWIPNIHDL V E NYLSLGLLVNYLS D ERCST NILVIAST+I QKVD ALIA NKLN CIKIRR                  FHLEKKMFH
Subjt:  MSPCIIWIPNIHDLYVTELNYLSLGLLVNYLSGDFERCSTTNILVIASTYISQKVDLALIALNKLNTCIKIRR------------------FHLEKKMFH

Query:  TNGFGSITMGSNVRDIVALTNEALSIR------------------------------------------RAVAQNVLLSNCSIDPISIYMMKKSCNEEGS
        TNGFGSITMGSNVRD+VALTNEALSI                                           RAVAQNVLLSNCSIDPISIYM KKSCNE GS
Subjt:  TNGFGSITMGSNVRDIVALTNEALSIR------------------------------------------RAVAQNVLLSNCSIDPISIYMMKKSCNEEGS

Query:  YLYNWYFELETSMKELTILL----------------------------YGLVENNYDLVHGLLEVEGALLGSSQIEKDCSRFDKDQVTLLLRLGLMNPLD
        YLY WYFEL TSMK+LTILL                            YGLVEN+ DLVHGLLEVEGALLGSS+ EKDCSRFD D+VTLLLR  L NPLD
Subjt:  YLYNWYFELETSMKELTILL----------------------------YGLVENNYDLVHGLLEVEGALLGSSQIEKDCSRFDKDQVTLLLRLGLMNPLD

Query:  MIQNGY------------------------FLNLQQIEENLFNHIVWAPRIWRPWGFLFNCIERLNELGFPYWARSFRGKQIIYDEDDELQENDSEFLQS
        MIQNG                          L+ QQIEE+LFNHIVWAPRIWRPWGFLF+CIER NELGFPYWARSFRGK+IIYDE+DELQENDSEFLQS
Subjt:  MIQNGY------------------------FLNLQQIEENLFNHIVWAPRIWRPWGFLFNCIERLNELGFPYWARSFRGKQIIYDEDDELQENDSEFLQS

Query:  GTMQYQTRDRSFKEQGFF
        GT+QYQTRDRS KEQGFF
Subjt:  GTMQYQTRDRSFKEQGFF

A0A6M3RTW0 Protein Ycf2

5.5e-130

64.42

Show/hide

Query:  MSPCIIWIPNIHDLYVTELNYLSLGLLVNYLSGDFERCSTTNILVIASTYISQKVDLALIALNKLNTCIKIRR------------------FHLEKKMFH
        MSPCIIWIPNIHDL V E NYLSLGLLVNYLS D ERCST NILVIAST+I QKVD ALIA NKLNTCIKIRR                  FHLEKKMFH
Subjt:  MSPCIIWIPNIHDLYVTELNYLSLGLLVNYLSGDFERCSTTNILVIASTYISQKVDLALIALNKLNTCIKIRR------------------FHLEKKMFH

Query:  TNGFGSITMGSNVRDIVALTNEALSIR------------------------------------------RAVAQNVLLSNCSIDPISIYMMKKSCNEEGS
        TNGFGSITMGSNVRD+VALTNEALSI                                           RAVAQNVLLSNCSIDPISIYM KKSCNE GS
Subjt:  TNGFGSITMGSNVRDIVALTNEALSIR------------------------------------------RAVAQNVLLSNCSIDPISIYMMKKSCNEEGS

Query:  YLYNWYFELETSMKELTILL----------------------------YGLVENNYDLVHGLLEVEGALLGSSQIEKDCSRFDKDQVTLLLRLGLMNPLD
        YLY WYFEL TSMK+LTILL                            YGLVEN+ DLVHGLLEVEGALLGSS+ EKDCSRFD D+VTLLLR    NPLD
Subjt:  YLYNWYFELETSMKELTILL----------------------------YGLVENNYDLVHGLLEVEGALLGSSQIEKDCSRFDKDQVTLLLRLGLMNPLD

Query:  MIQNGY----------------------FLNLQQIEENLFNHIVWAPRIWRPWGFLFNCIERLNELGFPYWARSFRGKQIIYDEDDELQENDSEFLQSGT
        MIQNG                        L+ QQIEE+LFNHIVWAPRIWRPWGFLF+CIER NELGFPYWARSFRGK+IIYDE+DELQENDSEFLQSGT
Subjt:  MIQNGY----------------------FLNLQQIEENLFNHIVWAPRIWRPWGFLFNCIERLNELGFPYWARSFRGKQIIYDEDDELQENDSEFLQSGT

Query:  MQYQTRDRSFKEQGFF
        +QYQTRDRS KEQGFF
Subjt:  MQYQTRDRSFKEQGFF

A0A6M3RVM4 Protein Ycf2

5.5e-130

64.42

Show/hide

Query:  MSPCIIWIPNIHDLYVTELNYLSLGLLVNYLSGDFERCSTTNILVIASTYISQKVDLALIALNKLNTCIKIRR------------------FHLEKKMFH
        MSPCIIWIPNIHDL V E NYLSLGLLVNYLS D ERCST NILVIAST+I QKVD ALIA NKLNTCIKIRR                  FHLEKKMFH
Subjt:  MSPCIIWIPNIHDLYVTELNYLSLGLLVNYLSGDFERCSTTNILVIASTYISQKVDLALIALNKLNTCIKIRR------------------FHLEKKMFH

Query:  TNGFGSITMGSNVRDIVALTNEALSIR------------------------------------------RAVAQNVLLSNCSIDPISIYMMKKSCNEEGS
        TNGFGSITMGSNVRD+VALTNEALSI                                           RAVAQNVLLSNCSIDPISIYM KKSCNE GS
Subjt:  TNGFGSITMGSNVRDIVALTNEALSIR------------------------------------------RAVAQNVLLSNCSIDPISIYMMKKSCNEEGS

Query:  YLYNWYFELETSMKELTILL----------------------------YGLVENNYDLVHGLLEVEGALLGSSQIEKDCSRFDKDQVTLLLRLGLMNPLD
        YLY WYFEL TSMK+LTILL                            YGLVEN+ DLVHGLLEVEGALLGSS+ EKDCSRFD D+VTLLLR    NPLD
Subjt:  YLYNWYFELETSMKELTILL----------------------------YGLVENNYDLVHGLLEVEGALLGSSQIEKDCSRFDKDQVTLLLRLGLMNPLD

Query:  MIQNGY----------------------FLNLQQIEENLFNHIVWAPRIWRPWGFLFNCIERLNELGFPYWARSFRGKQIIYDEDDELQENDSEFLQSGT
        MIQNG                        L+ QQIEE+LFNHIVWAPRIWRPWGFLF+CIER NELGFPYWARSFRGK+IIYDE+DELQENDSEFLQSGT
Subjt:  MIQNGY----------------------FLNLQQIEENLFNHIVWAPRIWRPWGFLFNCIERLNELGFPYWARSFRGKQIIYDEDDELQENDSEFLQSGT

Query:  MQYQTRDRSFKEQGFF
        +QYQTRDRS KEQGFF
Subjt:  MQYQTRDRSFKEQGFF

SwissProt top hits

e value

%identity

Alignment

Q09WV7 Protein Ycf2

6.5e-128

62.2

Show/hide

Query:  MSPCIIWIPNIHDLYVTELNYLSLGLLVNYLSGDFERCSTTNILVIASTYISQKVDLALIALNKLNTCIKIRR------------------FHLEKKMFH
        MSPCIIWIPNIHDL V E NYLSLGLLVNYLS D ERCST NILVIAST+I QKVD ALIA NKLNTCIKIRR                  FHLEKKMFH
Subjt:  MSPCIIWIPNIHDLYVTELNYLSLGLLVNYLSGDFERCSTTNILVIASTYISQKVDLALIALNKLNTCIKIRR------------------FHLEKKMFH

Query:  TNGFGSITMGSNVRDIVALTNEALSIR------------------------------------------RAVAQNVLLSNCSIDPISIYMMKKSCNEEGS
        TNGFGSITMGSNVRD+VALTNEALSI                                           RAVAQNVLLSNCSIDPISIYM KKSCNE  S
Subjt:  TNGFGSITMGSNVRDIVALTNEALSIR------------------------------------------RAVAQNVLLSNCSIDPISIYMMKKSCNEEGS

Query:  YLYNWYFELETSMKELTILL----------------------------YGLVENNYDLVHGLLEVEGALLGSSQIEKDCSRFDKDQVTLLLRLGLMNPLD
        YLY WYFEL TSMK+LTILL                            YGLVEN+ DLVHGLLEVEG L+GSS+ EKDCS+FD D+ TLLLR    NPLD
Subjt:  YLYNWYFELETSMKELTILL----------------------------YGLVENNYDLVHGLLEVEGALLGSSQIEKDCSRFDKDQVTLLLRLGLMNPLD

Query:  MIQNGY------------------------FLNLQQIEENLFNHIVWAPRIWRPWGFLFNCIERLNELGFPYWARSFRGKQIIYDEDDELQENDSEFLQS
        M+QNG                          L+ Q+IEE+LFNHIVWAPRIWRPWGFLF+CIE  NELGFPYWARSFRGK+IIYDE+D LQENDSEFLQS
Subjt:  MIQNGY------------------------FLNLQQIEENLFNHIVWAPRIWRPWGFLFNCIERLNELGFPYWARSFRGKQIIYDEDDELQENDSEFLQS

Query:  GTMQYQTRDRSFKEQGFF
        GTMQYQTRDRS KEQGFF
Subjt:  GTMQYQTRDRSFKEQGFF

Q0ZIV6 Protein Ycf2

6.9e-130

62.92

Show/hide

Query:  MSPCIIWIPNIHDLYVTELNYLSLGLLVNYLSGDFERCSTTNILVIASTYISQKVDLALIALNKLNTCIKIRR------------------FHLEKKMFH
        MSPCIIWIPNIHDL V E NYLSLGLLVNYLS D ERCST NILVIAST+I QKVD ALIA NKLNTCIKIRR                  FHLEKKMFH
Subjt:  MSPCIIWIPNIHDLYVTELNYLSLGLLVNYLSGDFERCSTTNILVIASTYISQKVDLALIALNKLNTCIKIRR------------------FHLEKKMFH

Query:  TNGFGSITMGSNVRDIVALTNEALSIR------------------------------------------RAVAQNVLLSNCSIDPISIYMMKKSCNEEGS
        TNGFGSITMGSN RD+VALTNEALSI                                           RAVAQNVLLSNC IDPISIYM KKSCNE  S
Subjt:  TNGFGSITMGSNVRDIVALTNEALSIR------------------------------------------RAVAQNVLLSNCSIDPISIYMMKKSCNEEGS

Query:  YLYNWYFELETSMKELTILL----------------------------YGLVENNYDLVHGLLEVEGALLGSSQIEKDCSRFDKDQVTLLLRLGLMNPLD
        YLY WYFEL TSMK+LTILL                            YGLVEN+ DLVHGLLEVEGAL+GSS+ EKDCS+FD D+VTLLLR    NPLD
Subjt:  YLYNWYFELETSMKELTILL----------------------------YGLVENNYDLVHGLLEVEGALLGSSQIEKDCSRFDKDQVTLLLRLGLMNPLD

Query:  MIQNGY------------------------FLNLQQIEENLFNHIVWAPRIWRPWGFLFNCIERLNELGFPYWARSFRGKQIIYDEDDELQENDSEFLQS
        M+QNG                          L+ QQIEE+LFNHIVWAPRIWRPWGFLF+CIER NELGFPYWARSFRGK+IIYDE+DELQENDSEFLQS
Subjt:  MIQNGY------------------------FLNLQQIEENLFNHIVWAPRIWRPWGFLFNCIERLNELGFPYWARSFRGKQIIYDEDDELQENDSEFLQS

Query:  GTMQYQTRDRSFKEQGFF
        GTMQYQTRDRS KEQGFF
Subjt:  GTMQYQTRDRSFKEQGFF

Q2PMM5 Protein Ycf2

1.6e-126

62.02

Show/hide

Query:  MSPCIIWIPNIHDLYVTELNYLSLGLLVNYLSGDFERCSTTNILVIASTYISQKVDLALIALNKLNTCIKIRR------------------FHLEKKMFH
        MSPCIIWIPNIHDL V E NYLSLGLLVNYLS D ERCST NILVIAST+I QKVD ALIA NKLNTCIKIRR                  FHLEKKM H
Subjt:  MSPCIIWIPNIHDLYVTELNYLSLGLLVNYLSGDFERCSTTNILVIASTYISQKVDLALIALNKLNTCIKIRR------------------FHLEKKMFH

Query:  TNGFGSITMGSNVRDIVALTNEALSIR------------------------------------------RAVAQNVLLSNCSIDPISIYMMKKSCNEEGS
        TNGFGS TMGSNVRD+VALTNEALSI                                           RAV+QNVLLSNCSIDPISIYM KKSC+   S
Subjt:  TNGFGSITMGSNVRDIVALTNEALSIR------------------------------------------RAVAQNVLLSNCSIDPISIYMMKKSCNEEGS

Query:  YLYNWYFELETSMKELTILL----------------------------YGLVENNYDLVHGLLEVEGALLGSSQIEKDCSRFDKDQVTLLLRLGLMNPLD
        YLY WYFEL TSMK+LTILL                            YGLVENN DLVHGLLEVEGAL+GSS+ EKDCS+FDKD+VTLLLR    NPL+
Subjt:  YLYNWYFELETSMKELTILL----------------------------YGLVENNYDLVHGLLEVEGALLGSSQIEKDCSRFDKDQVTLLLRLGLMNPLD

Query:  MIQNGYF----------------------LNLQQIEENLFNHIVWAPRIWRPWGFLFNCIERLNELGFPYWARSFRGKQIIYDEDDELQENDSEFLQSGT
        MIQNG +                      L+ QQIEE+ FNHIVWAPRIW PWGFLF CIER NELGFPYWARSFR K+IIYDE+DELQENDSEFLQ GT
Subjt:  MIQNGYF----------------------LNLQQIEENLFNHIVWAPRIWRPWGFLFNCIERLNELGFPYWARSFRGKQIIYDEDDELQENDSEFLQSGT

Query:  MQYQTRDRSFKEQGFF
        MQYQTRDRS KEQGFF
Subjt:  MQYQTRDRSFKEQGFF

Q2QD30 Protein Ycf2

7.6e-129

62.74

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Query:  MSPCIIWIPNIHDLYVTELNYLSLGLLVNYLSGDFERCSTTNILVIASTYISQKVDLALIALNKLNTCIKIRR------------------FHLEKKMFH
        MSPCIIWIPNIHDLYV + ++L  GLLVNYL  DFERCSTTNILVIAST+I QKVD ALIA NKLNTCIKIRR                  FHLEKKMFH
Subjt:  MSPCIIWIPNIHDLYVTELNYLSLGLLVNYLSGDFERCSTTNILVIASTYISQKVDLALIALNKLNTCIKIRR------------------FHLEKKMFH

Query:  TNGFGSITMGSNVRDIVALTNEALSIR------------------------------------------RAVAQNVLLSNCSIDPISIYMMKKSCNEEGS
        TNGFGSITMGSNVRD+VALTNEALSI                                           RA+AQNVLLSNCSIDPISIYM KKSCNE GS
Subjt:  TNGFGSITMGSNVRDIVALTNEALSIR------------------------------------------RAVAQNVLLSNCSIDPISIYMMKKSCNEEGS

Query:  YLYNWYFELETSMKELTILL----------------------------YGLVENNYDLVHGLLEVEGALLGSSQIEKDCSRFDKDQVTLLLRLGLMNPLD
        YLYNWYFELETSMK+LTILL                            Y LVEN+  LVHGLLEVEGAL GSS  EKDCSRFD D+VTLLLR    NPLD
Subjt:  YLYNWYFELETSMKELTILL----------------------------YGLVENNYDLVHGLLEVEGALLGSSQIEKDCSRFDKDQVTLLLRLGLMNPLD

Query:  MIQNGY----------------------FLNLQQIEENLFNHIVWAPRIWRPWGFLFNCIERLNELGFPYWARSFRGKQIIYDEDDELQENDSEFLQSGT
        MIQNG                        L+ QQIEE+LFNHIVWAPRIW PWGFLF+CIER NELG PYWARSFRGK+IIYDE+DELQENDSEFLQSGT
Subjt:  MIQNGY----------------------FLNLQQIEENLFNHIVWAPRIWRPWGFLFNCIERLNELGFPYWARSFRGKQIIYDEDDELQENDSEFLQSGT

Query:  MQYQTRDRSFKEQGFF
        +QYQTRDRS KEQGFF
Subjt:  MQYQTRDRSFKEQGFF

Q49KT6 Protein Ycf2

1.4e-127

62.44

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Query:  MSPCIIWIPNIHDLYVTELNYLSLGLLVNYLSGDFERCSTTNILVIASTYISQKVDLALIALNKLNTCIKIRR------------------FHLEKKMFH
        MSPCIIWIPNIHDL V E NYLSLGLLVNYLS D ERCST NILVIAST+I QKVD ALIA NKLNTCIKIRR                  FHLEKKMFH
Subjt:  MSPCIIWIPNIHDLYVTELNYLSLGLLVNYLSGDFERCSTTNILVIASTYISQKVDLALIALNKLNTCIKIRR------------------FHLEKKMFH

Query:  TNGFGSITMGSNVRDIVALTNEALSIR------------------------------------------RAVAQNVLLSNCSIDPISIYMMKKSCNEEGS
        TNGFGSITMGSNVRD+VALTNEALSI                                           RAVAQNVLLSNC IDPISIYM KKSCNE  S
Subjt:  TNGFGSITMGSNVRDIVALTNEALSIR------------------------------------------RAVAQNVLLSNCSIDPISIYMMKKSCNEEGS

Query:  YLYNWYFELETSMKELTILL----------------------------YGLVENNYDLVHGLLEVEGALLGSSQIEKDCSRFDKDQVTLLLRLGLMNPLD
        YLY WYFEL TSMK+LTILL                            YGLVEN+ DLVHGLLEVEGAL+GSS+ EKD S+FD D+VTLLLR    NPLD
Subjt:  YLYNWYFELETSMKELTILL----------------------------YGLVENNYDLVHGLLEVEGALLGSSQIEKDCSRFDKDQVTLLLRLGLMNPLD

Query:  MIQNGY------------------------FLNLQQIEENLFNHIVWAPRIWRPWGFLFNCIERLNELGFPYWARSFRGKQIIYDEDDELQENDSEFLQS
        M+QNG                          L+ QQIEE+LFNHIVWAPRIWRPWGFLF+CIER N LGFPYWARSFRGK+IIYDE +ELQENDSEFLQS
Subjt:  MIQNGY------------------------FLNLQQIEENLFNHIVWAPRIWRPWGFLFNCIERLNELGFPYWARSFRGKQIIYDEDDELQENDSEFLQS

Query:  GTMQYQTRDRSFKEQGFF
        GTMQYQTRDRS KEQGFF
Subjt:  GTMQYQTRDRSFKEQGFF

Arabidopsis top hits

e value

%identity

Alignment

ATCG00860.1 Chloroplast Ycf2;ATPase, AAA type, core

3.1e-117

58.61

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Query:  MSPCIIWIPNIHDLYVTELNYLSLGLLVNYLSGDFERCSTTNILVIASTYISQKVDLALIALNKLNTCIKIRR------------------FHLEKKMFH
        MSPCIIWIPNIHDL V E +YL+LGLLVN LS D ERCST NILVIAST+I QKVD ALIA NKLNTCIKIRR                  FHLEKKMFH
Subjt:  MSPCIIWIPNIHDLYVTELNYLSLGLLVNYLSGDFERCSTTNILVIASTYISQKVDLALIALNKLNTCIKIRR------------------FHLEKKMFH

Query:  TNGFGSITMGSNVRDIVALTNEALSIR------------------------------------------RAVAQNVLLSNCSIDPISIYMMKKSCNEEGS
        TNGF SITMGS+ RD+VALTNEALSI                                           RAVAQNVL+SNC IDPISIYM KKSCNE  S
Subjt:  TNGFGSITMGSNVRDIVALTNEALSIR------------------------------------------RAVAQNVLLSNCSIDPISIYMMKKSCNEEGS

Query:  YLYNWYFELETSMKELTILL----------------------------YGLVENNYDLVHGLLEVEGALLGSSQIEKDCSRFDKDQVTLLLRLGLMNPLD
        YLY WYFEL TSMK+ TILL                            YG VEN+ DLVHGLLEV+GAL+GSS+ EKDCS+FD D+VTLL R    +PL 
Subjt:  YLYNWYFELETSMKELTILL----------------------------YGLVENNYDLVHGLLEVEGALLGSSQIEKDCSRFDKDQVTLLLRLGLMNPLD

Query:  MIQNGY------------------------FLNLQQIEENLFNHIVWAPRIWRPWGFLFNCIERLNELGFPYWARSFRGKQIIYDEDDELQENDSEFLQS
        M+Q+G                          L+ QQIEE+LFNHIVWAPRIWRP GFLF+CIER NELGFPY A SFRGK+IIYDE  ELQENDSEFLQS
Subjt:  MIQNGY------------------------FLNLQQIEENLFNHIVWAPRIWRPWGFLFNCIERLNELGFPYWARSFRGKQIIYDEDDELQENDSEFLQS

Query:  GTMQYQTRDRSFKEQGFF
        GTMQYQ RDRS KEQGFF
Subjt:  GTMQYQTRDRSFKEQGFF

ATCG01280.1 Chloroplast Ycf2;ATPase, AAA type, core

3.1e-117

58.61

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Query:  MSPCIIWIPNIHDLYVTELNYLSLGLLVNYLSGDFERCSTTNILVIASTYISQKVDLALIALNKLNTCIKIRR------------------FHLEKKMFH
        MSPCIIWIPNIHDL V E +YL+LGLLVN LS D ERCST NILVIAST+I QKVD ALIA NKLNTCIKIRR                  FHLEKKMFH
Subjt:  MSPCIIWIPNIHDLYVTELNYLSLGLLVNYLSGDFERCSTTNILVIASTYISQKVDLALIALNKLNTCIKIRR------------------FHLEKKMFH

Query:  TNGFGSITMGSNVRDIVALTNEALSIR------------------------------------------RAVAQNVLLSNCSIDPISIYMMKKSCNEEGS
        TNGF SITMGS+ RD+VALTNEALSI                                           RAVAQNVL+SNC IDPISIYM KKSCNE  S
Subjt:  TNGFGSITMGSNVRDIVALTNEALSIR------------------------------------------RAVAQNVLLSNCSIDPISIYMMKKSCNEEGS

Query:  YLYNWYFELETSMKELTILL----------------------------YGLVENNYDLVHGLLEVEGALLGSSQIEKDCSRFDKDQVTLLLRLGLMNPLD
        YLY WYFEL TSMK+ TILL                            YG VEN+ DLVHGLLEV+GAL+GSS+ EKDCS+FD D+VTLL R    +PL 
Subjt:  YLYNWYFELETSMKELTILL----------------------------YGLVENNYDLVHGLLEVEGALLGSSQIEKDCSRFDKDQVTLLLRLGLMNPLD

Query:  MIQNGY------------------------FLNLQQIEENLFNHIVWAPRIWRPWGFLFNCIERLNELGFPYWARSFRGKQIIYDEDDELQENDSEFLQS
        M+Q+G                          L+ QQIEE+LFNHIVWAPRIWRP GFLF+CIER NELGFPY A SFRGK+IIYDE  ELQENDSEFLQS
Subjt:  MIQNGY------------------------FLNLQQIEENLFNHIVWAPRIWRPWGFLFNCIERLNELGFPYWARSFRGKQIIYDEDDELQENDSEFLQS

Query:  GTMQYQTRDRSFKEQGFF
        GTMQYQ RDRS KEQGFF
Subjt:  GTMQYQTRDRSFKEQGFF

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTCTCCTTGCATAATATGGATTCCAAACATTCATGATCTGTATGTGACTGAGTTAAATTACTTATCCCTTGGTCTATTAGTGAACTATCTCTCCGGGGATTTCGAAAG
ATGTTCCACTACAAATATTCTTGTTATTGCTTCGACCTATATTTCCCAAAAAGTGGATCTCGCTCTAATAGCTCTGAATAAATTGAATACATGCATTAAAATACGAAGAT
TTCACTTGGAAAAGAAAATGTTCCATACTAATGGATTCGGTTCCATAACCATGGGTTCCAATGTACGTGATATTGTAGCACTTACCAATGAGGCCCTATCGATTAGAAGG
GCTGTTGCGCAAAATGTACTTCTAAGTAATTGCTCCATAGATCCTATATCTATCTATATGATGAAGAAATCATGTAACGAAGAGGGTTCTTATTTGTACAATTGGTACTT
CGAACTTGAAACTAGCATGAAGGAATTAACGATACTTCTTTATGGACTTGTTGAGAATAATTATGATCTGGTTCATGGCCTATTAGAAGTAGAAGGCGCTTTGTTGGGAT
CCTCACAGATAGAAAAAGATTGCAGTCGATTTGATAAGGATCAAGTGACATTGCTTCTTCGACTTGGACTTATGAATCCCTTAGATATGATACAAAATGGATATTTCCTC
AACCTGCAACAGATAGAGGAGAATTTATTTAATCACATAGTTTGGGCTCCTAGAATATGGCGCCCTTGGGGCTTTCTATTTAATTGTATCGAAAGGCTCAATGAATTGGG
ATTTCCCTATTGGGCTAGGTCATTTCGGGGCAAGCAGATCATTTATGATGAAGATGATGAGCTTCAAGAGAATGATTCGGAGTTCTTGCAGAGTGGAACCATGCAGTACC
AGACACGAGATAGATCTTTCAAAGAACAAGGCTTTTTTTGA

mRNA sequence

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Protein sequence

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MSPCIIWIPNIHDLYVTELNYLSLGLLVNYLSGDFERCSTTNILVIASTYISQKVDLALIALNKLNTCIKIRRFHLEKKMFHTNGFGSITMGSNVRDIVALTNEALSIRR
AVAQNVLLSNCSIDPISIYMMKKSCNEEGSYLYNWYFELETSMKELTILLYGLVENNYDLVHGLLEVEGALLGSSQIEKDCSRFDKDQVTLLLRLGLMNPLDMIQNGYFL
NLQQIEENLFNHIVWAPRIWRPWGFLFNCIERLNELGFPYWARSFRGKQIIYDEDDELQENDSEFLQSGTMQYQTRDRSFKEQGFF

IVF0000407 (gene) of Melon (IVF77) v1 genome