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IVF0000419 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0000419
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag-pol polyprotein
Genome locationchr09:2856179..2856610
RNA-Seq ExpressionIVF0000419
SyntenyIVF0000419
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039550.1 uncharacterized protein E6C27_scaffold744G00190 [Cucumis melo var. makuwa]1.47e-6679.72Show/hide
Query:  MSEDESVSDYNERVLEIANESLLLGEKIPESKIVHKVLRSLLGKLDMKVTAIEEAHDITKLKHDELFGSLLTFEMSISGRENKKGNCIEFKSIYEEETTV
        MSEDESVSDYN+RVL+I+NESLL GEKIP+SKIVHKVLRSLLGK DMKVT IEEAH+ITKLK  ELFGSLLTFEM+IS RE+K G  I FKSIY+EETTV
Subjt:  MSEDESVSDYNERVLEIANESLLLGEKIPESKIVHKVLRSLLGKLDMKVTAIEEAHDITKLKHDELFGSLLTFEMSISGRENKKGNCIEFKSIYEEETTV

Query:  NQFDIEANMNESITLLTKQFSKVVKKFKNLNATGSNSRNPTNH
        NQ D  AN+NESI LLTKQFSKVVKKFK LN TGSN++N TN+
Subjt:  NQFDIEANMNESITLLTKQFSKVVKKFKNLNATGSNSRNPTNH

KAA0048271.1 Receptor-like protein 12 [Cucumis melo var. makuwa]7.26e-7079.72Show/hide
Query:  MSEDESVSDYNERVLEIANESLLLGEKIPESKIVHKVLRSLLGKLDMKVTAIEEAHDITKLKHDELFGSLLTFEMSISGRENKKGNCIEFKSIYEEETTV
        MSEDESVS+YNERVLEIANESLLLGEKIPESKIVHK+LRSLL K DMKVTAIEEAHDITKLK DELF SLL+FE++IS RENKKG  + FKS+YEEE+TV
Subjt:  MSEDESVSDYNERVLEIANESLLLGEKIPESKIVHKVLRSLLGKLDMKVTAIEEAHDITKLKHDELFGSLLTFEMSISGRENKKGNCIEFKSIYEEETTV

Query:  NQFDIEANMNESITLLTKQFSKVVKKFKNLNATGSNSRNPTNH
        N+ + +AN+N+SI LLTKQFSK+VKKFKN+N  GSNSRNPTN+
Subjt:  NQFDIEANMNESITLLTKQFSKVVKKFKNLNATGSNSRNPTNH

KAA0050329.1 gag-proteinase polyprotein [Cucumis melo var. makuwa]1.88e-6681.12Show/hide
Query:  MSEDESVSDYNERVLEIANESLLLGEKIPESKIVHKVLRSLLGKLDMKVTAIEEAHDITKLKHDELFGSLLTFEMSISGRENKKGNCIEFKSIYEEETTV
        MSEDESVSDYNERVLEIANESLLLGEKIP+SKIV KVLRSL  K DMKVTAIEEAHDIT LK DELF SLLTFEM+IS RENKKG  + FKSIYEEETTV
Subjt:  MSEDESVSDYNERVLEIANESLLLGEKIPESKIVHKVLRSLLGKLDMKVTAIEEAHDITKLKHDELFGSLLTFEMSISGRENKKGNCIEFKSIYEEETTV

Query:  NQFDIEANMNESITLLTKQFSKVVKKFKNLNATGSNSRNPTNH
        NQ D EANMNESI LL +QFSKVV+KFKN+N TGSN +NP ++
Subjt:  NQFDIEANMNESITLLTKQFSKVVKKFKNLNATGSNSRNPTNH

KAA0052069.1 gag-pol polyprotein [Cucumis melo var. makuwa]3.19e-6781.12Show/hide
Query:  MSEDESVSDYNERVLEIANESLLLGEKIPESKIVHKVLRSLLGKLDMKVTAIEEAHDITKLKHDELFGSLLTFEMSISGRENKKGNCIEFKSIYEEETTV
        MSEDESVS+YNERVLEIANESLLLGEKIP+SKIV K+L+SL GK DMKVTAIEEAHDITKLK DELFGSLLTFE++IS +E+KKG  I FK IYEEETTV
Subjt:  MSEDESVSDYNERVLEIANESLLLGEKIPESKIVHKVLRSLLGKLDMKVTAIEEAHDITKLKHDELFGSLLTFEMSISGRENKKGNCIEFKSIYEEETTV

Query:  NQFDIEANMNESITLLTKQFSKVVKKFKNLNATGSNSRNPTNH
        N  D  ANMNESI LLTKQFSKVVKKFKNLN TGSN++N TN+
Subjt:  NQFDIEANMNESITLLTKQFSKVVKKFKNLNATGSNSRNPTNH

TYK01749.1 uncharacterized protein E5676_scaffold775G00790 [Cucumis melo var. makuwa]5.96e-6679.02Show/hide
Query:  MSEDESVSDYNERVLEIANESLLLGEKIPESKIVHKVLRSLLGKLDMKVTAIEEAHDITKLKHDELFGSLLTFEMSISGRENKKGNCIEFKSIYEEETTV
        MSEDESVSDYN+RVL+I+NESLL GEKIP+SKIVHKVLRSLLGK DMKVT IEEAH+ITKLK  ELFGSLLTFEM+IS RE++ G  I FKSIY+EETTV
Subjt:  MSEDESVSDYNERVLEIANESLLLGEKIPESKIVHKVLRSLLGKLDMKVTAIEEAHDITKLKHDELFGSLLTFEMSISGRENKKGNCIEFKSIYEEETTV

Query:  NQFDIEANMNESITLLTKQFSKVVKKFKNLNATGSNSRNPTNH
        NQ D  AN+NESI LLTKQFSKVVKKFK LN TGSN++N TN+
Subjt:  NQFDIEANMNESITLLTKQFSKVVKKFKNLNATGSNSRNPTNH

TrEMBL top hitse value%identityAlignment
A0A5A7T8I2 CCHC-type domain-containing protein1.4e-5179.72Show/hide
Query:  MSEDESVSDYNERVLEIANESLLLGEKIPESKIVHKVLRSLLGKLDMKVTAIEEAHDITKLKHDELFGSLLTFEMSISGRENKKGNCIEFKSIYEEETTV
        MSEDESVSDYN+RVL+I+NESLL GEKIP+SKIVHKVLRSLLGK DMKVT IEEAH+ITKLK  ELFGSLLTFEM+IS RE+K G  I FKSIY+EETTV
Subjt:  MSEDESVSDYNERVLEIANESLLLGEKIPESKIVHKVLRSLLGKLDMKVTAIEEAHDITKLKHDELFGSLLTFEMSISGRENKKGNCIEFKSIYEEETTV

Query:  NQFDIEANMNESITLLTKQFSKVVKKFKNLNATGSNSRNPTNH
        NQ D  AN+NESI LLTKQFSKVVKKFK LN TGSN++N TN+
Subjt:  NQFDIEANMNESITLLTKQFSKVVKKFKNLNATGSNSRNPTNH

A0A5A7U3Y3 Receptor-like protein 125.1e-5479.72Show/hide
Query:  MSEDESVSDYNERVLEIANESLLLGEKIPESKIVHKVLRSLLGKLDMKVTAIEEAHDITKLKHDELFGSLLTFEMSISGRENKKGNCIEFKSIYEEETTV
        MSEDESVS+YNERVLEIANESLLLGEKIPESKIVHK+LRSLL K DMKVTAIEEAHDITKLK DELF SLL+FE++IS RENKKG  + FKS+YEEE+TV
Subjt:  MSEDESVSDYNERVLEIANESLLLGEKIPESKIVHKVLRSLLGKLDMKVTAIEEAHDITKLKHDELFGSLLTFEMSISGRENKKGNCIEFKSIYEEETTV

Query:  NQFDIEANMNESITLLTKQFSKVVKKFKNLNATGSNSRNPTNH
        N+ + +AN+N+SI LLTKQFSK+VKKFKN+N  GSNSRNPTN+
Subjt:  NQFDIEANMNESITLLTKQFSKVVKKFKNLNATGSNSRNPTNH

A0A5A7UA03 Gag-proteinase polyprotein1.3e-5281.12Show/hide
Query:  MSEDESVSDYNERVLEIANESLLLGEKIPESKIVHKVLRSLLGKLDMKVTAIEEAHDITKLKHDELFGSLLTFEMSISGRENKKGNCIEFKSIYEEETTV
        MSEDESVSDYNERVLEIANESLLLGEKIP+SKIV KVLRSL  K DMKVTAIEEAHDIT LK DELF SLLTFEM+IS RENKKG  + FKSIYEEETTV
Subjt:  MSEDESVSDYNERVLEIANESLLLGEKIPESKIVHKVLRSLLGKLDMKVTAIEEAHDITKLKHDELFGSLLTFEMSISGRENKKGNCIEFKSIYEEETTV

Query:  NQFDIEANMNESITLLTKQFSKVVKKFKNLNATGSNSRNPTNH
        NQ D EANMNESI LL +QFSKVV+KFKN+N TGSN +NP ++
Subjt:  NQFDIEANMNESITLLTKQFSKVVKKFKNLNATGSNSRNPTNH

A0A5D3BN48 Gag-pol polyprotein3.7e-5281.12Show/hide
Query:  MSEDESVSDYNERVLEIANESLLLGEKIPESKIVHKVLRSLLGKLDMKVTAIEEAHDITKLKHDELFGSLLTFEMSISGRENKKGNCIEFKSIYEEETTV
        MSEDESVS+YNERVLEIANESLLLGEKIP+SKIV K+L+SL GK DMKVTAIEEAHDITKLK DELFGSLLTFE++IS +E+KKG  I FK IYEEETTV
Subjt:  MSEDESVSDYNERVLEIANESLLLGEKIPESKIVHKVLRSLLGKLDMKVTAIEEAHDITKLKHDELFGSLLTFEMSISGRENKKGNCIEFKSIYEEETTV

Query:  NQFDIEANMNESITLLTKQFSKVVKKFKNLNATGSNSRNPTNH
        N  D  ANMNESI LLTKQFSKVVKKFKNLN TGSN++N TN+
Subjt:  NQFDIEANMNESITLLTKQFSKVVKKFKNLNATGSNSRNPTNH

A0A5D3BPA2 Gag-pol polyprotein3.1e-5179.02Show/hide
Query:  MSEDESVSDYNERVLEIANESLLLGEKIPESKIVHKVLRSLLGKLDMKVTAIEEAHDITKLKHDELFGSLLTFEMSISGRENKKGNCIEFKSIYEEETTV
        MS+DE VSDYNERVLEIANESLLLGEKIPESKIV KVLRSL GK DMKVTAIEEAHDITKLK DELFGSLLTFEM+IS RENKK   + FKSIYE+E+  
Subjt:  MSEDESVSDYNERVLEIANESLLLGEKIPESKIVHKVLRSLLGKLDMKVTAIEEAHDITKLKHDELFGSLLTFEMSISGRENKKGNCIEFKSIYEEETTV

Query:  NQFDIEANMNESITLLTKQFSKVVKKFKNLNATGSNSRNPTNH
        +Q D E +MNESI LLTKQ SK+VKKFKNLN TGS+++NPTN+
Subjt:  NQFDIEANMNESITLLTKQFSKVVKKFKNLNATGSNSRNPTNH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAGAAGATGAGTCTGTATCAGATTACAACGAGAGGGTTTTGGAAATAGCAAATGAATCGTTACTTCTTGGAGAAAAGATTCCTGAATCTAAGATAGTGCATAAGGT
GCTACGATCGTTACTTGGAAAACTTGACATGAAGGTTACAGCTATAGAGGAAGCACATGATATAACTAAATTAAAACATGATGAGTTGTTTGGGTCTCTACTTACATTCG
AGATGTCTATATCAGGTAGAGAGAATAAGAAAGGCAACTGCATTGAATTTAAATCAATATATGAAGAAGAGACAACAGTCAATCAATTTGATATTGAAGCAAATATGAAT
GAATCTATAACTCTTCTGACGAAACAATTTTCTAAGGTAGTCAAGAAGTTCAAAAATTTGAATGCTACAGGATCCAACTCTAGAAATCCGACAAATCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCAGAAGATGAGTCTGTATCAGATTACAACGAGAGGGTTTTGGAAATAGCAAATGAATCGTTACTTCTTGGAGAAAAGATTCCTGAATCTAAGATAGTGCATAAGGT
GCTACGATCGTTACTTGGAAAACTTGACATGAAGGTTACAGCTATAGAGGAAGCACATGATATAACTAAATTAAAACATGATGAGTTGTTTGGGTCTCTACTTACATTCG
AGATGTCTATATCAGGTAGAGAGAATAAGAAAGGCAACTGCATTGAATTTAAATCAATATATGAAGAAGAGACAACAGTCAATCAATTTGATATTGAAGCAAATATGAAT
GAATCTATAACTCTTCTGACGAAACAATTTTCTAAGGTAGTCAAGAAGTTCAAAAATTTGAATGCTACAGGATCCAACTCTAGAAATCCGACAAATCATTGA
Protein sequenceShow/hide protein sequence
MSEDESVSDYNERVLEIANESLLLGEKIPESKIVHKVLRSLLGKLDMKVTAIEEAHDITKLKHDELFGSLLTFEMSISGRENKKGNCIEFKSIYEEETTVNQFDIEANMN
ESITLLTKQFSKVVKKFKNLNATGSNSRNPTNH