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IVF0000491 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0000491
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPMD domain-containing protein
Genome locationchr10:20147264..20147641
RNA-Seq ExpressionIVF0000491
SyntenyIVF0000491
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041757.1 putative mitochondrial protein [Cucumis melo var. makuwa]2.55e-7080.8Show/hide
Query:  MVYFTERFLSGVRHPVVSSDRNQPREDELNFLVEKPWTGSFVDRWPRLDDNLILPRLSVEIPLSVGKTAWVLQSSIHNEAPNSDRALILGQRLIEGQTRW
        M+YFTERFL GVRH VV  DRNQ RED L+ LVEKPWTGSF D WPRLD++ ILPRLSVEIPL  GKTAWVLQSSIHNE PNSDR L LGQ LIEGQTRW
Subjt:  MVYFTERFLSGVRHPVVSSDRNQPREDELNFLVEKPWTGSFVDRWPRLDDNLILPRLSVEIPLSVGKTAWVLQSSIHNEAPNSDRALILGQRLIEGQTRW

Query:  GAMTKVPREFCFINCYWEWLELLVG
        G MTKVPREFCF +CYWEWLEL+VG
Subjt:  GAMTKVPREFCFINCYWEWLELLVG
KAA0048380.1 putative mitochondrial protein [Cucumis melo var. makuwa]2.12e-7079.2Show/hide
Query:  MVYFTERFLSGVRHPVVSSDRNQPREDELNFLVEKPWTGSFVDRWPRLDDNLILPRLSVEIPLSVGKTAWVLQSSIHNEAPNSDRALILGQRLIEGQTRW
        MVYFTERFLS VRH V+ SDRNQPRED L+ +VE PW G+F D WPRLD+N +LPRLSVEIPLS GK+AWVLQSSIHNEAPNS RAL LGQRLIEGQTRW
Subjt:  MVYFTERFLSGVRHPVVSSDRNQPREDELNFLVEKPWTGSFVDRWPRLDDNLILPRLSVEIPLSVGKTAWVLQSSIHNEAPNSDRALILGQRLIEGQTRW

Query:  GAMTKVPREFCFINCYWEWLELLVG
        G +TKVP EFCF +CYWEWLEL+VG
Subjt:  GAMTKVPREFCFINCYWEWLELLVG
KAA0049836.1 putative mitochondrial protein [Cucumis melo var. makuwa]3.07e-71100Show/hide
Query:  MVYFTERFLSGVRHPVVSSDRNQPREDELNFLVEKPWTGSFVDRWPRLDDNLILPRLSVEIPLSVGKTAWVLQSSIHNEAPNSDRALILGQRLIEGQTRW
        MVYFTERFLSGVRHPVVSSDRNQPREDELNFLVEKPWTGSFVDRWPRLDDNLILPRLSVEIPLSVGKTAWVLQSSIHNEAPNSDRALILGQRLIEGQTRW
Subjt:  MVYFTERFLSGVRHPVVSSDRNQPREDELNFLVEKPWTGSFVDRWPRLDDNLILPRLSVEIPLSVGKTAWVLQSSIHNEAPNSDRALILGQRLIEGQTRW

Query:  GAMTK
        GAMTK
Subjt:  GAMTK
KAA0057574.1 putative mitochondrial protein [Cucumis melo var. makuwa]2.54e-7178.4Show/hide
Query:  MVYFTERFLSGVRHPVVSSDRNQPREDELNFLVEKPWTGSFVDRWPRLDDNLILPRLSVEIPLSVGKTAWVLQSSIHNEAPNSDRALILGQRLIEGQTRW
        MVYFTERFLSGVRH V+ SDRNQPRED L+ +VEKPW G+F D WPRLD+N +LPRLSVE+PLS GK+AWVLQSSIHNEA NS +AL LGQRLIEGQTRW
Subjt:  MVYFTERFLSGVRHPVVSSDRNQPREDELNFLVEKPWTGSFVDRWPRLDDNLILPRLSVEIPLSVGKTAWVLQSSIHNEAPNSDRALILGQRLIEGQTRW

Query:  GAMTKVPREFCFINCYWEWLELLVG
        G +TKVP EFCF +CYWEWLEL+VG
Subjt:  GAMTKVPREFCFINCYWEWLELLVG
XP_008442010.1 PREDICTED: uncharacterized protein LOC103486002 [Cucumis melo]1.32e-7080.8Show/hide
Query:  MVYFTERFLSGVRHPVVSSDRNQPREDELNFLVEKPWTGSFVDRWPRLDDNLILPRLSVEIPLSVGKTAWVLQSSIHNEAPNSDRALILGQRLIEGQTRW
        M+YFTERFL GVRH VV  DRNQ RED L+ LVEKPWTGSF D WPRLD++ ILPRLSVEIPL  GKTAWVLQSSIHNE PNSDR L LGQ LIEGQTRW
Subjt:  MVYFTERFLSGVRHPVVSSDRNQPREDELNFLVEKPWTGSFVDRWPRLDDNLILPRLSVEIPLSVGKTAWVLQSSIHNEAPNSDRALILGQRLIEGQTRW

Query:  GAMTKVPREFCFINCYWEWLELLVG
        G MTKVPREFCF +CYWEWLEL+VG
Subjt:  GAMTKVPREFCFINCYWEWLELLVG
TrEMBL top hitse value%identityAlignment
A0A5A7TX42 Uncharacterized protein8.2e-5680Show/hide
Query:  MVYFTERFLSGVRHPVVSSDRNQPREDELNFLVEKPWTGSFVDRWPRLDDNLILPRLSVEIPLSVGKTAWVLQSSIHNEAPNSDRALILGQRLIEGQTRW
        MVYFTERFLSGVRH V+ SDRNQPRED L+ +VEKPW G+F D WPRLD+N +LPRLSVE+PLS GK+AWVLQSSIHNEAPNS RAL LGQRLIEGQTRW
Subjt:  MVYFTERFLSGVRHPVVSSDRNQPREDELNFLVEKPWTGSFVDRWPRLDDNLILPRLSVEIPLSVGKTAWVLQSSIHNEAPNSDRALILGQRLIEGQTRW

Query:  GAMTKVPREFCFINCYWEWLELLVG
        G +TKVP EFCF +CYWEWLEL+VG
Subjt:  GAMTKVPREFCFINCYWEWLELLVG
A0A5A7U8L3 PMD domain-containing protein6.2e-5680Show/hide
Query:  MVYFTERFLSGVRHPVVSSDRNQPREDELNFLVEKPWTGSFVDRWPRLDDNLILPRLSVEIPLSVGKTAWVLQSSIHNEAPNSDRALILGQRLIEGQTRW
        MVYFTERFLSGVRH V+ SDRNQPRED L+ ++EKPW G+F D WPRLD+N +LPRLSVEIPLS GK+AW+LQSSIHNEAPNS RAL LGQRLIEGQTRW
Subjt:  MVYFTERFLSGVRHPVVSSDRNQPREDELNFLVEKPWTGSFVDRWPRLDDNLILPRLSVEIPLSVGKTAWVLQSSIHNEAPNSDRALILGQRLIEGQTRW

Query:  GAMTKVPREFCFINCYWEWLELLVG
        G MTKVP EFCF +CYWEWLEL+VG
Subjt:  GAMTKVPREFCFINCYWEWLELLVG
A0A5A7UET3 Putative mitochondrial protein8.2e-5680Show/hide
Query:  MVYFTERFLSGVRHPVVSSDRNQPREDELNFLVEKPWTGSFVDRWPRLDDNLILPRLSVEIPLSVGKTAWVLQSSIHNEAPNSDRALILGQRLIEGQTRW
        MVYFTERFLSGVRH V+ SDRNQPRED L+ +VEKPW G+F D WPRLD+N +LPRLSVEIPLS GK+AW+LQSSIHNEAPNS RAL LGQRLIEGQTRW
Subjt:  MVYFTERFLSGVRHPVVSSDRNQPREDELNFLVEKPWTGSFVDRWPRLDDNLILPRLSVEIPLSVGKTAWVLQSSIHNEAPNSDRALILGQRLIEGQTRW

Query:  GAMTKVPREFCFINCYWEWLELLVG
        G +TKVP EFCF +CYWEWLEL+VG
Subjt:  GAMTKVPREFCFINCYWEWLELLVG
A0A5A7VHW8 PMD domain-containing protein4.8e-5680Show/hide
Query:  MVYFTERFLSGVRHPVVSSDRNQPREDELNFLVEKPWTGSFVDRWPRLDDNLILPRLSVEIPLSVGKTAWVLQSSIHNEAPNSDRALILGQRLIEGQTRW
        MVYFTERFLSGVRH V+ SDRNQPRED L+ +VEKPW G+F D WPRLD+N +LPRLSVEIPLS GK+AW+LQSSIH+EAPNS RAL LGQRLIEGQTRW
Subjt:  MVYFTERFLSGVRHPVVSSDRNQPREDELNFLVEKPWTGSFVDRWPRLDDNLILPRLSVEIPLSVGKTAWVLQSSIHNEAPNSDRALILGQRLIEGQTRW

Query:  GAMTKVPREFCFINCYWEWLELLVG
        G +TKVPREFCF +CYWEWLEL+VG
Subjt:  GAMTKVPREFCFINCYWEWLELLVG
A0A5D3D2A0 PMD domain-containing protein2.5e-5787.2Show/hide
Query:  MVYFTERFLSGVRHPVVSSDRNQPREDELNFLVEKPWTGSFVDRWPRLDDNLILPRLSVEIPLSVGKTAWVLQSSIHNEAPNSDRALILGQRLIEGQTRW
        MVYFTERFLSGVRH VVSSDRNQPRED+LNF VEKP TGSF D WPRLD+NLIL RLSVEIPLSVGK AWVLQSSIHNEAPNSDRAL LGQ LIEGQTRW
Subjt:  MVYFTERFLSGVRHPVVSSDRNQPREDELNFLVEKPWTGSFVDRWPRLDDNLILPRLSVEIPLSVGKTAWVLQSSIHNEAPNSDRALILGQRLIEGQTRW

Query:  GAMTKVPREFCFINCYWEWLELLVG
        GAMTKV  EFCF +CYWEWLEL+VG
Subjt:  GAMTKVPREFCFINCYWEWLELLVG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTACTTCACAGAACGATTCTTGTCTGGAGTTCGACACCCTGTAGTTTCTTCTGATAGAAATCAGCCAAGAGAAGATGAACTTAATTTCCTTGTGGAGAAGCCATG
GACTGGCTCTTTTGTAGATCGTTGGCCACGTTTAGACGACAATTTAATTCTTCCCAGATTGTCTGTAGAGATACCTTTATCCGTGGGAAAAACTGCATGGGTCCTACAGT
CTTCTATCCATAACGAGGCTCCTAATTCTGATAGAGCTCTTATCCTCGGACAACGTTTAATTGAAGGCCAAACACGTTGGGGTGCTATGACCAAGGTCCCTAGAGAGTTC
TGCTTTATTAACTGCTATTGGGAGTGGCTAGAGCTTTTAGTTGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTACTTCACAGAACGATTCTTGTCTGGAGTTCGACACCCTGTAGTTTCTTCTGATAGAAATCAGCCAAGAGAAGATGAACTTAATTTCCTTGTGGAGAAGCCATG
GACTGGCTCTTTTGTAGATCGTTGGCCACGTTTAGACGACAATTTAATTCTTCCCAGATTGTCTGTAGAGATACCTTTATCCGTGGGAAAAACTGCATGGGTCCTACAGT
CTTCTATCCATAACGAGGCTCCTAATTCTGATAGAGCTCTTATCCTCGGACAACGTTTAATTGAAGGCCAAACACGTTGGGGTGCTATGACCAAGGTCCCTAGAGAGTTC
TGCTTTATTAACTGCTATTGGGAGTGGCTAGAGCTTTTAGTTGGTTGA
Protein sequenceShow/hide protein sequence
MVYFTERFLSGVRHPVVSSDRNQPREDELNFLVEKPWTGSFVDRWPRLDDNLILPRLSVEIPLSVGKTAWVLQSSIHNEAPNSDRALILGQRLIEGQTRWGAMTKVPREF
CFINCYWEWLELLVG