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IVF0000532 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0000532
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPMD domain-containing protein
Genome locationchr06:1197529..1197729
RNA-Seq ExpressionIVF0000532
SyntenyIVF0000532
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041757.1 putative mitochondrial protein [Cucumis melo var. makuwa]2.09e-0679.31Show/hide
Query:  MVYFTERFLSGVQHLVVSFDRNQLKEDGL
        M+YFTERFL GV+HLVV +DRNQL+EDGL
Subjt:  MVYFTERFLSGVQHLVVSFDRNQLKEDGL

KAA0050427.1 uncharacterized protein E6C27_scaffold175G00150 [Cucumis melo var. makuwa]3.15e-3695.31Show/hide
Query:  MVYFTERFLSGVQHLVVSFDRNQLKEDGLDCTTLKMKINCTALKMKIDCVALKIKMMIISDAPH
        MVYFTERFLSGVQHLVVSFDRNQLKEDGLDCTTLKMKINCTALKMKIDC ALK+KMMIISD PH
Subjt:  MVYFTERFLSGVQHLVVSFDRNQLKEDGLDCTTLKMKINCTALKMKIDCVALKIKMMIISDAPH

KAA0052092.1 hypothetical protein E6C27_scaffold578G00740 [Cucumis melo var. makuwa]4.13e-1364.81Show/hide
Query:  MVYFTERFLSGVQHLVVSFDRNQLKEDGLDCTTL-KMKINCTALKMKIDCVALK
        MVYFT++ LSGV+HL V  DRNQ +EDG DC  L KMKI+C ALKM I C  LK
Subjt:  MVYFTERFLSGVQHLVVSFDRNQLKEDGLDCTTL-KMKINCTALKMKIDCVALK

TYK01658.1 hypothetical protein E5676_scaffold128G00250 [Cucumis melo var. makuwa]5.55e-1773.58Show/hide
Query:  MVYFTERFLSGVQHLVVSFDRNQLKEDGLDCTTLKMKINCTALKMKIDCVALK
        MVYFTER LSGV+HLVV  DRNQ +EDGLDC  LK+KI+C ALKM I C ALK
Subjt:  MVYFTERFLSGVQHLVVSFDRNQLKEDGLDCTTLKMKINCTALKMKIDCVALK

XP_008442010.1 PREDICTED: uncharacterized protein LOC103486002 [Cucumis melo]1.58e-0679.31Show/hide
Query:  MVYFTERFLSGVQHLVVSFDRNQLKEDGL
        M+YFTERFL GV+HLVV +DRNQL+EDGL
Subjt:  MVYFTERFLSGVQHLVVSFDRNQLKEDGL

TrEMBL top hitse value%identityAlignment
A0A5A7U7S4 Uncharacterized protein4.6e-2695.31Show/hide
Query:  MVYFTERFLSGVQHLVVSFDRNQLKEDGLDCTTLKMKINCTALKMKIDCVALKIKMMIISDAPH
        MVYFTERFLSGVQHLVVSFDRNQLKEDGLDCTTLKMKINCTALKMKIDC ALK+KMMIISD PH
Subjt:  MVYFTERFLSGVQHLVVSFDRNQLKEDGLDCTTLKMKINCTALKMKIDCVALKIKMMIISDAPH

A0A5A7V4F4 PMD domain-containing protein3.8e-0482.76Show/hide
Query:  MVYFTERFLSGVQHLVVSFDRNQLKEDGL
        MVYFTERFLSGV+HLV+  DRNQL+EDGL
Subjt:  MVYFTERFLSGVQHLVVSFDRNQLKEDGL

A0A5D3BR16 Uncharacterized protein2.6e-0862.3Show/hide
Query:  MVYFTERFLSGVQHLVVSFDRNQLKEDGLDCTTL-KMKINCTALKMKIDCVALKIKMMIIS
        MVYFT++ LSGV+HL V  DRNQ +EDG DC  L KMKI+C ALKM I C  L  K MI+S
Subjt:  MVYFTERFLSGVQHLVVSFDRNQLKEDGLDCTTL-KMKINCTALKMKIDCVALKIKMMIIS

A0A5D3BRA8 PMD domain-containing protein3.8e-0482.76Show/hide
Query:  MVYFTERFLSGVQHLVVSFDRNQLKEDGL
        MVYFTERFLSGV+HLV+  DRNQL+EDGL
Subjt:  MVYFTERFLSGVQHLVVSFDRNQLKEDGL

A0A5D3BRM4 Uncharacterized protein1.4e-1172.22Show/hide
Query:  MVYFTERFLSGVQHLVVSFDRNQLKEDGLDCTTLKMKINCTALKMKIDCVALKI
        MVYFTER LSGV+HLVV  DRNQ +EDGLDC  LK+KI+C ALKM I C ALK+
Subjt:  MVYFTERFLSGVQHLVVSFDRNQLKEDGLDCTTLKMKINCTALKMKIDCVALKI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTACTTCACAGAACGATTCTTGTCTGGAGTCCAACACCTTGTAGTTTCTTTTGATAGAAATCAACTAAAAGAAGATGGACTTGACTGCACCACATTGAAGATGAA
GATCAACTGCACCGCATTGAAGATGAAGATTGACTGCGTCGCATTGAAGATAAAGATGATGATCATTTCAGATGCGCCACATTGTAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTACTTCACAGAACGATTCTTGTCTGGAGTCCAACACCTTGTAGTTTCTTTTGATAGAAATCAACTAAAAGAAGATGGACTTGACTGCACCACATTGAAGATGAA
GATCAACTGCACCGCATTGAAGATGAAGATTGACTGCGTCGCATTGAAGATAAAGATGATGATCATTTCAGATGCGCCACATTGTAGATGA
Protein sequenceShow/hide protein sequence
MVYFTERFLSGVQHLVVSFDRNQLKEDGLDCTTLKMKINCTALKMKIDCVALKIKMMIISDAPHCR