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IVF0000572 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0000572
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionphotosystem I subunit O
Genome locationchr12:12565691..12566938
RNA-Seq ExpressionIVF0000572
SyntenyIVF0000572
Gene Ontology termsGO:0009767 - photosynthetic electron transport chain (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR017498 - Photosystem I PsaO


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139499.1 photosystem I subunit O [Cucumis sativus]9.52e-9494.52Show/hide
Query:  MATAFATSSVAGLGTASLSSPSSRSPRLVSGFIKSPVAARNPLNVGRASRGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGTE
        MATAFATSSVAGLGTASLSSPSSRSPRLVSGFIK PVAARNPL+V  AS G+FTCFERDWLRRDLNVIGFGLIGWIAPSSIPVI+GKSLTGLFFESIG E
Subjt:  MATAFATSSVAGLGTASLSSPSSRSPRLVSGFIKSPVAARNPLNVGRASRGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGTE

Query:  LAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK
        LAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK
Subjt:  LAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK

XP_008463649.1 PREDICTED: photosystem I subunit O [Cucumis melo]2.63e-100100Show/hide
Query:  MATAFATSSVAGLGTASLSSPSSRSPRLVSGFIKSPVAARNPLNVGRASRGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGTE
        MATAFATSSVAGLGTASLSSPSSRSPRLVSGFIKSPVAARNPLNVGRASRGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGTE
Subjt:  MATAFATSSVAGLGTASLSSPSSRSPRLVSGFIKSPVAARNPLNVGRASRGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGTE

Query:  LAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK
        LAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK
Subjt:  LAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK

XP_022142590.1 photosystem I subunit O [Momordica charantia]4.47e-8889.19Show/hide
Query:  MATAFATSS-VAGLG-TASLSSPSSRSPRLVSGFIKSPVAARNPLNVGRASRGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIG
        MATAFATSS + GLG ++SLSSPSSRSPRL S F+KSP AARNPL+V RAS GRFTCFERDWLRRDLNVIGFGLIGW+APSSIPVINGKSLTGLFFESIG
Subjt:  MATAFATSS-VAGLG-TASLSSPSSRSPRLVSGFIKSPVAARNPLNVGRASRGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIG

Query:  TELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK
         ELAHFPSPPALTSQFWLWL+TWHLGLFITLTFGQIGFKGRTEDYFSK
Subjt:  TELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK

XP_022973174.1 photosystem I subunit O [Cucurbita maxima]2.50e-8788.44Show/hide
Query:  MATAFATSS-VAGLGTASLSSPSSRSPRLVSGFIKSPVAARNPLNVGRASRGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGT
        MA+AFATSS V GLG++SLSSPSSRSPRLVSGFIK PV ARNP  V R+  GRFTCF+RDWLRRDLNVIGFGLIGWIAPSSIPVI+GKSLTGLFFESIG 
Subjt:  MATAFATSS-VAGLGTASLSSPSSRSPRLVSGFIKSPVAARNPLNVGRASRGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGT

Query:  ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK
        ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYF K
Subjt:  ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK

XP_038895620.1 photosystem I subunit O [Benincasa hispida]1.34e-9193.2Show/hide
Query:  MATAFATSS-VAGLGTASLSSPSSRSPRLVSGFIKSPVAARNPLNVGRASRGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGT
        MATAFATSS V GLGTASLSSPSSRSPRLVSGF+K PV ARNP  V RAS GRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIG 
Subjt:  MATAFATSS-VAGLGTASLSSPSSRSPRLVSGFIKSPVAARNPLNVGRASRGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGT

Query:  ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK
        ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK
Subjt:  ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK

TrEMBL top hitse value%identityAlignment
A0A0A0LT61 Uncharacterized protein7.3e-7294.52Show/hide
Query:  MATAFATSSVAGLGTASLSSPSSRSPRLVSGFIKSPVAARNPLNVGRASRGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGTE
        MATAFATSSVAGLGTASLSSPSSRSPRLVSGFIK PVAARNPL+V  AS G+FTCFERDWLRRDLNVIGFGLIGWIAPSSIPVI+GKSLTGLFFESIG E
Subjt:  MATAFATSSVAGLGTASLSSPSSRSPRLVSGFIKSPVAARNPLNVGRASRGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGTE

Query:  LAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK
        LAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK
Subjt:  LAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK

A0A1S3CJR4 photosystem I subunit O7.5e-77100Show/hide
Query:  MATAFATSSVAGLGTASLSSPSSRSPRLVSGFIKSPVAARNPLNVGRASRGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGTE
        MATAFATSSVAGLGTASLSSPSSRSPRLVSGFIKSPVAARNPLNVGRASRGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGTE
Subjt:  MATAFATSSVAGLGTASLSSPSSRSPRLVSGFIKSPVAARNPLNVGRASRGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGTE

Query:  LAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK
        LAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK
Subjt:  LAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK

A0A6J1CLD0 photosystem I subunit O1.4e-6789.19Show/hide
Query:  MATAFATSS-VAGLG-TASLSSPSSRSPRLVSGFIKSPVAARNPLNVGRASRGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIG
        MATAFATSS + GLG ++SLSSPSSRSPRL S F+KSP AARNPL+V RAS GRFTCFERDWLRRDLNVIGFGLIGW+APSSIPVINGKSLTGLFFESIG
Subjt:  MATAFATSS-VAGLG-TASLSSPSSRSPRLVSGFIKSPVAARNPLNVGRASRGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIG

Query:  TELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK
         ELAHFPSPPALTSQFWLWL+TWHLGLFITLTFGQIGFKGRTEDYFSK
Subjt:  TELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK

A0A6J1EID2 photosystem I subunit O1.3e-6587.07Show/hide
Query:  MATAFAT-SSVAGLGTASLSSPSSRSPRLVSGFIKSPVAARNPLNVGRASRGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGT
        MA+AFAT SSV GLG++SLSSPSSRSPRLVS F+K PV ARNP  V R+  GR TCF+RDWLRRDLNVIGFGLIGWIAPSSIPVI+GKSLTGLFFESIGT
Subjt:  MATAFAT-SSVAGLGTASLSSPSSRSPRLVSGFIKSPVAARNPLNVGRASRGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGT

Query:  ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK
        ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYF K
Subjt:  ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK

A0A6J1IDS7 photosystem I subunit O5.4e-6788.44Show/hide
Query:  MATAFAT-SSVAGLGTASLSSPSSRSPRLVSGFIKSPVAARNPLNVGRASRGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGT
        MA+AFAT SSV GLG++SLSSPSSRSPRLVSGFIK PV ARNP  V R+  GRFTCF+RDWLRRDLNVIGFGLIGWIAPSSIPVI+GKSLTGLFFESIG 
Subjt:  MATAFAT-SSVAGLGTASLSSPSSRSPRLVSGFIKSPVAARNPLNVGRASRGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGT

Query:  ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK
        ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYF K
Subjt:  ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK

SwissProt top hitse value%identityAlignment
Q949Q5 Photosystem I subunit O7.8e-5571.72Show/hide
Query:  MATAFAT-SSVAGLGTASLSSPSSRSPRLVSGFIKSPVAARNPLNVGRASRGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGT
        MA  FAT S+V GLG +S+++         S F+K  ++A+NPL +  AS GR TCFER+WLRRDLNV+GFGLIGW+APSSIP INGKSLTGLFF+SIGT
Subjt:  MATAFAT-SSVAGLGTASLSSPSSRSPRLVSGFIKSPVAARNPLNVGRASRGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGT

Query:  ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYF
        ELAHFP+PPALTSQFWLWL+TWHLGLF+ LTFGQIGFKGRTEDYF
Subjt:  ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYF

Arabidopsis top hitse value%identityAlignment
AT1G08380.1 photosystem I subunit O5.5e-5671.72Show/hide
Query:  MATAFAT-SSVAGLGTASLSSPSSRSPRLVSGFIKSPVAARNPLNVGRASRGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGT
        MA  FAT S+V GLG +S+++         S F+K  ++A+NPL +  AS GR TCFER+WLRRDLNV+GFGLIGW+APSSIP INGKSLTGLFF+SIGT
Subjt:  MATAFAT-SSVAGLGTASLSSPSSRSPRLVSGFIKSPVAARNPLNVGRASRGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGT

Query:  ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYF
        ELAHFP+PPALTSQFWLWL+TWHLGLF+ LTFGQIGFKGRTEDYF
Subjt:  ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACCGCCTTCGCTACCTCCTCTGTCGCCGGCCTCGGAACCGCCTCCCTCTCCTCTCCTTCCTCCAGATCTCCCCGTCTAGTCTCCGGGTTCATCAAGTCGCCCGT
GGCCGCCAGGAATCCGCTTAACGTAGGGCGTGCATCCCGTGGAAGGTTCACCTGCTTTGAGAGGGATTGGCTACGGAGAGATCTGAATGTTATTGGATTTGGACTGATCG
GGTGGATTGCCCCATCGAGCATTCCGGTGATCAATGGGAAGAGCTTGACGGGGCTGTTCTTTGAGAGCATTGGAACAGAGCTTGCCCATTTTCCTTCTCCACCCGCCCTC
ACTTCTCAATTCTGGTTGTGGCTGATTACGTGGCATTTGGGTCTCTTCATTACGCTTACTTTTGGACAAATCGGATTCAAGGGAAGGACCGAAGACTACTTTTCAAAGTG
A
mRNA sequenceShow/hide mRNA sequence
AAACGCCCAACAAAATCCCAATCCCTTTCCCCCTCCCTTCTACAAACCAACTGCACCTCCCGACCCCTAAATCCGCACTAATCCCGATCCCCACAAAATGGCCACCGCCT
TCGCTACCTCCTCTGTCGCCGGCCTCGGAACCGCCTCCCTCTCCTCTCCTTCCTCCAGATCTCCCCGTCTAGTCTCCGGGTTCATCAAGTCGCCCGTGGCCGCCAGGAAT
CCGCTTAACGTAGGGCGTGCATCCCGTGGAAGGTTCACCTGCTTTGAGAGGGATTGGCTACGGAGAGATCTGAATGTTATTGGATTTGGACTGATCGGGTGGATTGCCCC
ATCGAGCATTCCGGTGATCAATGGGAAGAGCTTGACGGGGCTGTTCTTTGAGAGCATTGGAACAGAGCTTGCCCATTTTCCTTCTCCACCCGCCCTCACTTCTCAATTCT
GGTTGTGGCTGATTACGTGGCATTTGGGTCTCTTCATTACGCTTACTTTTGGACAAATCGGATTCAAGGGAAGGACCGAAGACTACTTTTCAAAGTGAATATGTAATAAT
TCTTAAAAAGGAGAGAGAATTCTAGTTTTTGTTATTATTATTCATGTTTATAAGTTTATAACTTATAAGTAGTGTTTGTGTCCCCCATTTTCTTCATGTATAAATCGTTT
CAACCTCCAAATTTTGCTTC
Protein sequenceShow/hide protein sequence
MATAFATSSVAGLGTASLSSPSSRSPRLVSGFIKSPVAARNPLNVGRASRGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGTELAHFPSPPAL
TSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK