; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0000586 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0000586
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGamma-aminobutyrate transaminase POP2
Genome locationchr01:7622383..7622640
RNA-Seq ExpressionIVF0000586
SyntenyIVF0000586
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045869.1 uncharacterized protein E6C27_scaffold243G004050 [Cucumis melo var. makuwa]2.91e-0655.74Show/hide
Query:  MSVKNKGIPDAVSGISQHFRDASGDPLYIRFSSVLTELKPKGKRVREKRSIVARCPSSSFV
        MSV+N  I DA+ GIS  FR ASGD LY RFSSVL   + + +R REKR  VA   S S V
Subjt:  MSVKNKGIPDAVSGISQHFRDASGDPLYIRFSSVLTELKPKGKRVREKRSIVARCPSSSFV

KAA0059086.1 gamma-aminobutyrate transaminase POP2 [Cucumis melo var. makuwa]5.66e-0647.22Show/hide
Query:  MSVKNKGIPDAVSGISQHFRDASGDPLYIRFSSVLTELKPKGKRVREKRSIVARCPSSSFVRRRCRPLPPSA
        MSV N  I D + GIS+ FR ASGDPL+  FSSVL  ++ + +R   +  I  R       RRRCRP PPS+
Subjt:  MSVKNKGIPDAVSGISQHFRDASGDPLYIRFSSVLTELKPKGKRVREKRSIVARCPSSSFVRRRCRPLPPSA

KAA0062461.1 hypothetical protein E6C27_scaffold130G00490 [Cucumis melo var. makuwa]3.41e-1048.65Show/hide
Query:  MSVKNKGIPDAVSGISQHFRDASGDPLYIRFSSVLTELKPKGKRVREKRSIVARCPSSSFVRRRCRPLPPSATL
        MS+ N  IPD + GI + FR AS D LY RF+ +L   + + +R REKR  +A C SS  V    RP PPSATL
Subjt:  MSVKNKGIPDAVSGISQHFRDASGDPLYIRFSSVLTELKPKGKRVREKRSIVARCPSSSFVRRRCRPLPPSATL

KAA0063250.1 hypothetical protein E6C27_scaffold205G00660 [Cucumis melo var. makuwa]6.65e-0543.9Show/hide
Query:  MSVKNKGIPDAVSGISQHFRDASGDPLYIRFSSVLTEL---KPKGKRVREKRSIVARCPSSSFVRRRCRPL----PPSATLG
        MSV N GIPDA  GI++H   AS +PLY  FSSV   +   K KG + R K +++   PS   V      L    P SATLG
Subjt:  MSVKNKGIPDAVSGISQHFRDASGDPLYIRFSSVLTEL---KPKGKRVREKRSIVARCPSSSFVRRRCRPL----PPSATLG

TYK11801.1 GDSL esterase/lipase [Cucumis melo var. makuwa]5.91e-0543.75Show/hide
Query:  MSVKNKGIPDAVSGISQHFRDASGDPLYIRFSSVLTELKPKGKRVREKRSIVARCPSSSFVRRRC------RPLPPSATL
        MSV N GIPD+  GIS+    ASG+PLY RFSS+    + + +R +E  +  +R P     RRR        P PPSATL
Subjt:  MSVKNKGIPDAVSGISQHFRDASGDPLYIRFSSVLTELKPKGKRVREKRSIVARCPSSSFVRRRC------RPLPPSATL

TrEMBL top hitse value%identityAlignment
A0A5A7V9W7 Uncharacterized protein1.3e-0748.65Show/hide
Query:  MSVKNKGIPDAVSGISQHFRDASGDPLYIRFSSVLTELKPKGKRVREKRSIVARCPSSSFVRRRCRPLPPSATL
        MS+ N  IPD + GI + FR AS D LY RF+ +L   + + +R REKR  +A C SS  V    RP PPSATL
Subjt:  MSVKNKGIPDAVSGISQHFRDASGDPLYIRFSSVLTELKPKGKRVREKRSIVARCPSSSFVRRRCRPLPPSATL

A0A5D3CJ00 GDSL esterase/lipase4.9e-0443.75Show/hide
Query:  MSVKNKGIPDAVSGISQHFRDASGDPLYIRFSSVLTELKPKGKRVREKRSIVARCPSSSFVRRRC------RPLPPSATL
        MSV N GIPD+  GIS+    ASG+PLY RFSS+    + + +R +E  +  +R P     RRR        P PPSATL
Subjt:  MSVKNKGIPDAVSGISQHFRDASGDPLYIRFSSVLTELKPKGKRVREKRSIVARCPSSSFVRRRC------RPLPPSATL

A0A5D3CU45 Uncharacterized protein7.6e-0555.74Show/hide
Query:  MSVKNKGIPDAVSGISQHFRDASGDPLYIRFSSVLTELKPKGKRVREKRSIVARCPSSSFV
        MSV+N  I DA+ GIS  FR ASGD LY RFSSVL   + + +R REKR  VA   S S V
Subjt:  MSVKNKGIPDAVSGISQHFRDASGDPLYIRFSSVLTELKPKGKRVREKRSIVARCPSSSFV

A0A5D3E0D4 Gamma-aminobutyrate transaminase POP27.6e-0550.68Show/hide
Query:  MSVKNKGIPDAVSGISQHFRDASGDPLYIRFSSVLTELKPKGKRVREKRSI-VARCPSSSFVRRRCRPLPPSA
        MSV N  I D + GIS+ FR ASGDPL+  FSSVL  +  + +R RE R   + R P     RRRCRP PPS+
Subjt:  MSVKNKGIPDAVSGISQHFRDASGDPLYIRFSSVLTELKPKGKRVREKRSI-VARCPSSSFVRRRCRPLPPSA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTTTAATGAGCGTAAAAAATAAGGGTATTCCCGACGCCGTAAGTGGGATCTCCCAACATTTTCGTGATGCATCGGGAGATCCCCTATATATTCGTTTCAGTTCTGT
TTTAACAGAACTGAAACCGAAAGGGAAAAGAGTTAGAGAGAAACGATCCATCGTCGCCCGTTGTCCGTCATCGTCGTTCGTTCGTCGCCGTTGCCGTCCTTTGCCGCCGT
CTGCCACCTTAGGTAAGTTTAAATATAAGTTTGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTGTTTAATGAGCGTAAAAAATAAGGGTATTCCCGACGCCGTAAGTGGGATCTCCCAACATTTTCGTGATGCATCGGGAGATCCCCTATATATTCGTTTCAGTTCTGT
TTTAACAGAACTGAAACCGAAAGGGAAAAGAGTTAGAGAGAAACGATCCATCGTCGCCCGTTGTCCGTCATCGTCGTTCGTTCGTCGCCGTTGCCGTCCTTTGCCGCCGT
CTGCCACCTTAGGTAAGTTTAAATATAAGTTTGTTTAG
Protein sequenceShow/hide protein sequence
MCLMSVKNKGIPDAVSGISQHFRDASGDPLYIRFSSVLTELKPKGKRVREKRSIVARCPSSSFVRRRCRPLPPSATLGKFKYKFV