| GenBank top hits | e value | %identity | Alignment |
|---|
| XP_004134991.2 DNA-directed RNA polymerases IV and V subunit 4 isoform X1 [Cucumis sativus] | 2.64e-143 | 95.91 | Show/hide |
Query: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDAPNSFSMKYSGKNGDMGKGGKGANTKASVAKEPQSLELKIEQELP
MSEKGEKGFSVQK+PAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDA N+FSMKYSGKNGD+GKGGKGANTKAS+AKEPQ+LELKIEQELP
Subjt: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDAPNSFSMKYSGKNGDMGKGGKGANTKASVAKEPQSLELKIEQELP
Query: KNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGITDSEICVIANVCPDTTDEVFALLPSLKNKR
KNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYG+TDSEICVIANVCPDTTDEVFALLPSLK KR
Subjt: KNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGITDSEICVIANVCPDTTDEVFALLPSLKNKR
Query: SKLSEPLNNVLSELAKVKSS
SKLSEP+NNVLSELAKVKSS
Subjt: SKLSEPLNNVLSELAKVKSS
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| XP_008440955.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 4 isoform X1 [Cucumis melo] | 7.05e-148 | 100 | Show/hide |
Query: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDAPNSFSMKYSGKNGDMGKGGKGANTKASVAKEPQSLELKIEQELP
MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDAPNSFSMKYSGKNGDMGKGGKGANTKASVAKEPQSLELKIEQELP
Subjt: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDAPNSFSMKYSGKNGDMGKGGKGANTKASVAKEPQSLELKIEQELP
Query: KNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGITDSEICVIANVCPDTTDEVFALLPSLKNKR
KNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGITDSEICVIANVCPDTTDEVFALLPSLKNKR
Subjt: KNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGITDSEICVIANVCPDTTDEVFALLPSLKNKR
Query: SKLSEPLNNVLSELAKVKSS
SKLSEPLNNVLSELAKVKSS
Subjt: SKLSEPLNNVLSELAKVKSS
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| XP_008440960.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 4 isoform X2 [Cucumis melo] | 2.29e-143 | 98.18 | Show/hide |
Query: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDAPNSFSMKYSGKNGDMGKGGKGANTKASVAKEPQSLELKIEQELP
MSEKGEKGFSVQKKPAKSSLKSSALKD GKDDSLSKLKKGRKVQFDAQGSVDAPNSFSMKYSGKNGDMGKGGKGANTKASVAKEPQSLELKIEQELP
Subjt: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDAPNSFSMKYSGKNGDMGKGGKGANTKASVAKEPQSLELKIEQELP
Query: KNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGITDSEICVIANVCPDTTDEVFALLPSLKNKR
KNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGITDSEICVIANVCPDTTDEVFALLPSLKNKR
Subjt: KNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGITDSEICVIANVCPDTTDEVFALLPSLKNKR
Query: SKLSEPLNNVLSELAKVKSS
SKLSEPLNNVLSELAKVKSS
Subjt: SKLSEPLNNVLSELAKVKSS
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| XP_011658103.1 DNA-directed RNA polymerases IV and V subunit 4 isoform X2 [Cucumis sativus] | 8.56e-139 | 94.09 | Show/hide |
Query: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDAPNSFSMKYSGKNGDMGKGGKGANTKASVAKEPQSLELKIEQELP
MSEKGEKGFSVQK+PAKSSLKSSALKD GKDDSLSKLKKGRKVQFDAQGSVDA N+FSMKYSGKNGD+GKGGKGANTKAS+AKEPQ+LELKIEQELP
Subjt: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDAPNSFSMKYSGKNGDMGKGGKGANTKASVAKEPQSLELKIEQELP
Query: KNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGITDSEICVIANVCPDTTDEVFALLPSLKNKR
KNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYG+TDSEICVIANVCPDTTDEVFALLPSLK KR
Subjt: KNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGITDSEICVIANVCPDTTDEVFALLPSLKNKR
Query: SKLSEPLNNVLSELAKVKSS
SKLSEP+NNVLSELAKVKSS
Subjt: SKLSEPLNNVLSELAKVKSS
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| XP_038881037.1 DNA-directed RNA polymerases IV and V subunit 4-like isoform X1 [Benincasa hispida] | 6.66e-137 | 92.73 | Show/hide |
Query: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDAPNSFSMKYSGKNGDMGKGGKGANTKASVAKEPQSLELKIEQELP
MS+KGEKGF VQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDA ++FSMKYSGKNGD+GKGGKG NTKAS AKEPQ LELKIEQELP
Subjt: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDAPNSFSMKYSGKNGDMGKGGKGANTKASVAKEPQSLELKIEQELP
Query: KNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGITDSEICVIANVCPDTTDEVFALLPSLKNKR
KNVKCQCLMDCEAAQLLQGIQDQMV LSADPTIKIPTSFDRGLQYAKRANHYVN+ESVRPVLETLKK+G+T+SEICVIANVCPDTTDEVFALLPSLK KR
Subjt: KNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGITDSEICVIANVCPDTTDEVFALLPSLKNKR
Query: SKLSEPLNNVLSELAKVKSS
SKLSEPLNNVL ELAKVKSS
Subjt: SKLSEPLNNVLSELAKVKSS
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0KH45 RPOL4c domain-containing protein | 7.7e-110 | 95.91 | Show/hide |
Query: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDAPNSFSMKYSGKNGDMGKGGKGANTKASVAKEPQSLELKIEQELP
MSEKGEKGFSVQK+PAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDA N+FSMKYSGKNGD+GKGGKGANTKAS+AKEPQ+LELKIEQELP
Subjt: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDAPNSFSMKYSGKNGDMGKGGKGANTKASVAKEPQSLELKIEQELP
Query: KNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGITDSEICVIANVCPDTTDEVFALLPSLKNKR
KNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYG+TDSEICVIANVCPDTTDEVFALLPSLK KR
Subjt: KNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGITDSEICVIANVCPDTTDEVFALLPSLKNKR
Query: SKLSEPLNNVLSELAKVKSS
SKLSEP+NNVLSELAKVKSS
Subjt: SKLSEPLNNVLSELAKVKSS
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| A0A1S3B2C2 DNA-directed RNA polymerases IV and V subunit 4 isoform X1 | 2.6e-113 | 100 | Show/hide |
Query: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDAPNSFSMKYSGKNGDMGKGGKGANTKASVAKEPQSLELKIEQELP
MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDAPNSFSMKYSGKNGDMGKGGKGANTKASVAKEPQSLELKIEQELP
Subjt: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDAPNSFSMKYSGKNGDMGKGGKGANTKASVAKEPQSLELKIEQELP
Query: KNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGITDSEICVIANVCPDTTDEVFALLPSLKNKR
KNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGITDSEICVIANVCPDTTDEVFALLPSLKNKR
Subjt: KNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGITDSEICVIANVCPDTTDEVFALLPSLKNKR
Query: SKLSEPLNNVLSELAKVKSS
SKLSEPLNNVLSELAKVKSS
Subjt: SKLSEPLNNVLSELAKVKSS
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| A0A1S3B2C7 DNA-directed RNA polymerases IV and V subunit 4 isoform X2 | 1.0e-109 | 98.18 | Show/hide |
Query: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDAPNSFSMKYSGKNGDMGKGGKGANTKASVAKEPQSLELKIEQELP
MSEKGEKGFSVQKKPAKSSLKSSALKD GKDDSLSKLKKGRKVQFDAQGSVDAPNSFSMKYSGKNGDMGKGGKGANTKASVAKEPQSLELKIEQELP
Subjt: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDAPNSFSMKYSGKNGDMGKGGKGANTKASVAKEPQSLELKIEQELP
Query: KNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGITDSEICVIANVCPDTTDEVFALLPSLKNKR
KNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGITDSEICVIANVCPDTTDEVFALLPSLKNKR
Subjt: KNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGITDSEICVIANVCPDTTDEVFALLPSLKNKR
Query: SKLSEPLNNVLSELAKVKSS
SKLSEPLNNVLSELAKVKSS
Subjt: SKLSEPLNNVLSELAKVKSS
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| A0A6J1EJD9 DNA-directed RNA polymerases IV and V subunit 4-like isoform X1 | 2.2e-96 | 86.88 | Show/hide |
Query: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDAPNSFSMKYSGKNGDMGKGGKGAN-TKASVAKEPQSLELKIEQEL
MSEKGEKGF VQKKP KSSLKSSA KDASLKGKDDSLSK KKGRKVQFDAQGSVDA + S+K+SGKNGD+GKGGKG N KASV+KE Q LELKIEQEL
Subjt: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDAPNSFSMKYSGKNGDMGKGGKGAN-TKASVAKEPQSLELKIEQEL
Query: PKNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGITDSEICVIANVCPDTTDEVFALLPSLKNK
PKNVKCQCLMDCEAAQLLQGIQDQM LSADPTIKIPTSFDRGLQYAKRANHYVN E VRPVLETLKKYG+ DSEICVIANVCPDTTDEVF+L+PSLK+K
Subjt: PKNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGITDSEICVIANVCPDTTDEVFALLPSLKNK
Query: RSKLSEPLNNVLSELAKVKSS
RSKL+EPLNNVL ELAK+KSS
Subjt: RSKLSEPLNNVLSELAKVKSS
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| A0A6J1KMD1 DNA-directed RNA polymerases IV and V subunit 4-like | 5.8e-97 | 87.78 | Show/hide |
Query: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDAPNSFSMKYSGKNGDMGKGGKGAN-TKASVAKEPQSLELKIEQEL
MSEKGEKGF VQKKP KSSLKS A KDASLKGKDDSLSK KKGRKVQFDAQGSVDA + SMK+ GKNGD+GKGGKG N KASV+KE Q LELKIEQEL
Subjt: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFDAQGSVDAPNSFSMKYSGKNGDMGKGGKGAN-TKASVAKEPQSLELKIEQEL
Query: PKNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGITDSEICVIANVCPDTTDEVFALLPSLKNK
PKNVKCQCLMDCEAAQLLQGIQDQMV LSADPTIKIPTSFDRGLQYAKRANHYVN ESVRPVLETLKKYG+ DSEICVIANVCPDT DEVFAL+PSLK+K
Subjt: PKNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGITDSEICVIANVCPDTTDEVFALLPSLKNK
Query: RSKLSEPLNNVLSELAKVKSS
RSKL+EPLNNVLSELAK+KSS
Subjt: RSKLSEPLNNVLSELAKVKSS
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| O15514 DNA-directed RNA polymerase II subunit RPB4 | 3.2e-04 | 27.19 | Show/hide |
Query: QCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGITDSEICVIANVCPDTTDEVFALLPSLKNKRSKLSE
+ L++ E LL+ + Q SA+ ++ F + L Y R + + N E++ V L + + E+ +AN+CP+T +E AL+PSL+ + E
Subjt: QCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGITDSEICVIANVCPDTTDEVFALLPSLKNKRSKLSE
Query: PLNNVLSELAKVKS
L +L ++ +S
Subjt: PLNNVLSELAKVKS
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| O48890 DNA-directed RNA polymerase II subunit 4 | 1.2e-19 | 38.06 | Show/hide |
Query: KEPQSLELKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGITDSEICVIANVCPDT
+E + ELKI E +K +CLM+CE + +L+ +Q+ +S DP ++ F++ LQY KR + Y N ++VR V E L ++ +T+ E+CV+ N+CP+T
Subjt: KEPQSLELKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGITDSEICVIANVCPDT
Query: TDEVFALLPSLKNK-RSKLSEPLNNVLSELAKVK
+E A++PSLK K R+ E + +L++L+ VK
Subjt: TDEVFALLPSLKNK-RSKLSEPLNNVLSELAKVK
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| Q54S04 DNA-directed RNA polymerase II subunit rpb4 | 2.0e-06 | 27.81 | Show/hide |
Query: KASVAKEPQSLELKIEQELPKNVKCQCLMDCEAAQLLQ---GIQDQ----------MVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKK
++ + +E LK ++L K+ K L++ E A LL+ GI + ++ L + I +F + L YA++ + Y N S++ V L K
Subjt: KASVAKEPQSLELKIEQELPKNVKCQCLMDCEAAQLLQ---GIQDQ----------MVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKK
Query: YGITDSEICVIANVCPDTTDEVFALLPSLKNKRSKLSEPLNNVLSELAKVK
+ + EI +AN+CP+ +DE +L+PSLK + L +L EL+ ++
Subjt: YGITDSEICVIANVCPDTTDEVFALLPSLKNKRSKLSEPLNNVLSELAKVK
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| Q6DBA5 DNA-directed RNA polymerases IV and V subunit 4 | 4.9e-37 | 47.11 | Show/hide |
Query: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFD-----AQGSVDAPNSFSMKYSGKNGDMGKGGKGANTKASVAKEPQSLELKI
MSEKG KG KSSLKS KD GKD S +KLKKGRK+ FD A + +S + GK K TK+S S ELK
Subjt: MSEKGEKGFSVQKKPAKSSLKSSALKDASLKGKDDSLSKLKKGRKVQFD-----AQGSVDAPNSFSMKYSGKNGDMGKGGKGANTKASVAKEPQSLELKI
Query: EQELPKNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGITDSEICVIANVCPDTTDEVFALLPS
+LP+N +C+MDCEA Q+L GI+ Q+V LS DP+IKIP S+DR L Y + HY N +SVR VLE LK YGI+D E+CVIAN ++ DEV A +PS
Subjt: EQELPKNVKCQCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGITDSEICVIANVCPDTTDEVFALLPS
Query: LKNKRSKLSEPLNNVLSELAKVKSS
LK K+ +++PL + L EL+K+K S
Subjt: LKNKRSKLSEPLNNVLSELAKVKSS
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| Q9D7M8 DNA-directed RNA polymerase II subunit RPB4 | 3.2e-04 | 27.19 | Show/hide |
Query: QCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGITDSEICVIANVCPDTTDEVFALLPSLKNKRSKLSE
+ L++ E LL+ + Q SA+ ++ F + L Y R + + N E++ V L + + E+ +AN+CP+T +E AL+PSL+ + E
Subjt: QCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHYVNAESVRPVLETLKKYGITDSEICVIANVCPDTTDEVFALLPSLKNKRSKLSE
Query: PLNNVLSELAKVKS
L +L ++ +S
Subjt: PLNNVLSELAKVKS
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