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IVF0000619 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0000619
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr06:2391756..2392001
RNA-Seq ExpressionIVF0000619
SyntenyIVF0000619
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058838.1 retrotransposon protein [Cucumis melo var. makuwa]5.95e-4996.25Show/hide
Query:  MNKKVIFLRLQECVSVVPLKVVSGFGTERGYDWRSENLSLGEDMDGGLRYGFGPNLTHGQWLYVHIGADMEIVTVVDVKY
        MNKKVIFLRLQECVSVVPLKVVSGFGTERGYDWRSENLSLGEDMDGGLRYGFGPNLTHGQWLYVHIGADMEIVTVV  +Y
Subjt:  MNKKVIFLRLQECVSVVPLKVVSGFGTERGYDWRSENLSLGEDMDGGLRYGFGPNLTHGQWLYVHIGADMEIVTVVDVKY

TYK15867.1 hypothetical protein E5676_scaffold637G00440 [Cucumis melo var. makuwa]4.34e-1080.56Show/hide
Query:  GFGTERGYDWRSENLSLGEDMDGGLRYGFGPNLTHG
        G G +RG D RSENLSLGEDMDGG RYGFGP+LTHG
Subjt:  GFGTERGYDWRSENLSLGEDMDGGLRYGFGPNLTHG

TYK25868.1 hypothetical protein E5676_scaffold436G00840 [Cucumis melo var. makuwa]1.85e-1877.55Show/hide
Query:  ERGYDWRSENLSLGEDMDGGLRYGFGPNLTHGQWLYVHIGADMEIVTVV
        +RG++ RSENLSLGEDMDGGLRYG GP+L HG WLYVHIGADM++VT+V
Subjt:  ERGYDWRSENLSLGEDMDGGLRYGFGPNLTHGQWLYVHIGADMEIVTVV

XP_031737531.1 uncharacterized protein LOC116402424 [Cucumis sativus]1.06e-0961.82Show/hide
Query:  GFGTERGYDWRSENLSLGEDMDGG-LRYGFGPNLTHGQWLYVHIGADMEIVTVVD
        G G ERG D RSENLSLGEDM+GG LRYGFGP +THG  L+ +    + +VTVV 
Subjt:  GFGTERGYDWRSENLSLGEDMDGG-LRYGFGPNLTHGQWLYVHIGADMEIVTVVD

XP_031740114.1 uncharacterized protein LOC105435219 [Cucumis sativus]1.92e-1772.55Show/hide
Query:  LKVVSGFGTERGYDWRSENLSLGEDMDGGLRYGFGPNLTHGQWLYVHIGAD
        L++   FG ER  D RSENLSL EDMDGGLRYGF P+LTH  WLYVHIGAD
Subjt:  LKVVSGFGTERGYDWRSENLSLGEDMDGGLRYGFGPNLTHGQWLYVHIGAD

TrEMBL top hitse value%identityAlignment
A0A5A7UUF7 Retrotransposon protein3.2e-3796.25Show/hide
Query:  MNKKVIFLRLQECVSVVPLKVVSGFGTERGYDWRSENLSLGEDMDGGLRYGFGPNLTHGQWLYVHIGADMEIVTVVDVKY
        MNKKVIFLRLQECVSVVPLKVVSGFGTERGYDWRSENLSLGEDMDGGLRYGFGPNLTHGQWLYVHIGADMEIVTVV  +Y
Subjt:  MNKKVIFLRLQECVSVVPLKVVSGFGTERGYDWRSENLSLGEDMDGGLRYGFGPNLTHGQWLYVHIGADMEIVTVVDVKY

A0A5D3C1T8 Uncharacterized protein2.3e-0677.14Show/hide
Query:  FLRLQECVSVVPLKVVSGFGTERGYDWRSENLSLG
        FL+L+ECVSV P +VV GFGT+RG DWRSENLSLG
Subjt:  FLRLQECVSVVPLKVVSGFGTERGYDWRSENLSLG

A0A5D3CVC0 Uncharacterized protein2.0e-0780.56Show/hide
Query:  GFGTERGYDWRSENLSLGEDMDGGLRYGFGPNLTHG
        G G +RG D RSENLSLGEDMDGG RYGFGP+LTHG
Subjt:  GFGTERGYDWRSENLSLGEDMDGGLRYGFGPNLTHG

A0A5D3DQP8 Uncharacterized protein1.3e-1477.55Show/hide
Query:  ERGYDWRSENLSLGEDMDGGLRYGFGPNLTHGQWLYVHIGADMEIVTVV
        +RG++ RSENLSLGEDMDGGLRYG GP+L HG WLYVHIGADM++VT+V
Subjt:  ERGYDWRSENLSLGEDMDGGLRYGFGPNLTHGQWLYVHIGADMEIVTVV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACAAGAAGGTAATTTTCTTAAGGCTACAAGAATGTGTTTCCGTAGTGCCACTTAAGGTTGTCAGCGGTTTCGGGACTGAAAGAGGCTATGATTGGAGATCCGAGAA
CCTGAGCCTAGGTGAAGATATGGATGGAGGATTGCGATATGGCTTTGGGCCCAACTTAACTCATGGTCAGTGGCTCTATGTGCACATAGGAGCGGATATGGAGATTGTTA
CCGTGGTAGATGTTAAGTATACGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAACAAGAAGGTAATTTTCTTAAGGCTACAAGAATGTGTTTCCGTAGTGCCACTTAAGGTTGTCAGCGGTTTCGGGACTGAAAGAGGCTATGATTGGAGATCCGAGAA
CCTGAGCCTAGGTGAAGATATGGATGGAGGATTGCGATATGGCTTTGGGCCCAACTTAACTCATGGTCAGTGGCTCTATGTGCACATAGGAGCGGATATGGAGATTGTTA
CCGTGGTAGATGTTAAGTATACGTGA
Protein sequenceShow/hide protein sequence
MNKKVIFLRLQECVSVVPLKVVSGFGTERGYDWRSENLSLGEDMDGGLRYGFGPNLTHGQWLYVHIGADMEIVTVVDVKYT