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IVF0000622 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0000622
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionCell wall protein RBR3-like
Genome locationchr04:9976128..9976412
RNA-Seq ExpressionIVF0000622
SyntenyIVF0000622
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046488.1 uncharacterized protein E6C27_scaffold543G00710 [Cucumis melo var. makuwa]5.01e-5198.85Show/hide
Query:  MSTEDIPSPIHTTNNSGVPVEDNADTLAANHIEVPYADSAFTSSASPTDKSTPTKQQQHPPSSDTSGAGALSIPKMPRCSLTKDQKV
        MSTEDIPSPIHTTNNSGVPVEDNADTLAANHIEVPYADSAFTSSASPTDKSTPTKQQQHPPSSDTSGAGALSIPKMPRCSLTKDQK+
Subjt:  MSTEDIPSPIHTTNNSGVPVEDNADTLAANHIEVPYADSAFTSSASPTDKSTPTKQQQHPPSSDTSGAGALSIPKMPRCSLTKDQKV

KAA0047180.1 cell wall protein RBR3-like [Cucumis melo var. makuwa]1.90e-0848.28Show/hide
Query:  MSTEDIPSPIHTTNNSGVPVEDNADTLAANHIEVPYADSAFTSSASPTDKSTPTKQQQHPPSSDTSGAGALSIPKMPRCSLTKDQKV
        MS  DIPSPI  T N GV V DN DT      +VP  DSAF+ S S  D   PT  +  PPSSD SG+  L   +MP   LTK+  V
Subjt:  MSTEDIPSPIHTTNNSGVPVEDNADTLAANHIEVPYADSAFTSSASPTDKSTPTKQQQHPPSSDTSGAGALSIPKMPRCSLTKDQKV

TYJ97724.1 uncharacterized protein E5676_scaffold1251G00220 [Cucumis melo var. makuwa]2.88e-5097.7Show/hide
Query:  MSTEDIPSPIHTTNNSGVPVEDNADTLAANHIEVPYADSAFTSSASPTDKSTPTKQQQHPPSSDTSGAGALSIPKMPRCSLTKDQKV
        MSTEDIPSPIHTT+NSGVPVEDNADTLAANHIEVPYADSAFTSSASPTDKSTPTKQQQHPPSSDTSGAGALSIPKMPRCSLTKDQK+
Subjt:  MSTEDIPSPIHTTNNSGVPVEDNADTLAANHIEVPYADSAFTSSASPTDKSTPTKQQQHPPSSDTSGAGALSIPKMPRCSLTKDQKV

TrEMBL top hitse value%identityAlignment
A0A5A7TUG5 Uncharacterized protein8.9e-3998.85Show/hide
Query:  MSTEDIPSPIHTTNNSGVPVEDNADTLAANHIEVPYADSAFTSSASPTDKSTPTKQQQHPPSSDTSGAGALSIPKMPRCSLTKDQKV
        MSTEDIPSPIHTTNNSGVPVEDNADTLAANHIEVPYADSAFTSSASPTDKSTPTKQQQHPPSSDTSGAGALSIPKMPRCSLTKDQK+
Subjt:  MSTEDIPSPIHTTNNSGVPVEDNADTLAANHIEVPYADSAFTSSASPTDKSTPTKQQQHPPSSDTSGAGALSIPKMPRCSLTKDQKV

A0A5D3BF79 Uncharacterized protein3.4e-3897.7Show/hide
Query:  MSTEDIPSPIHTTNNSGVPVEDNADTLAANHIEVPYADSAFTSSASPTDKSTPTKQQQHPPSSDTSGAGALSIPKMPRCSLTKDQKV
        MSTEDIPSPIHTT+NSGVPVEDNADTLAANHIEVPYADSAFTSSASPTDKSTPTKQQQHPPSSDTSGAGALSIPKMPRCSLTKDQK+
Subjt:  MSTEDIPSPIHTTNNSGVPVEDNADTLAANHIEVPYADSAFTSSASPTDKSTPTKQQQHPPSSDTSGAGALSIPKMPRCSLTKDQKV

A0A5D3E1T9 Cell wall protein RBR3-like3.4e-0648.28Show/hide
Query:  MSTEDIPSPIHTTNNSGVPVEDNADTLAANHIEVPYADSAFTSSASPTDKSTPTKQQQHPPSSDTSGAGALSIPKMPRCSLTKDQKV
        MS  DIPSPI  T N GV V DN DT      +VP  DSAF+ S S  D   PT  +  PPSSD SG+  L   +MP   LTK+  V
Subjt:  MSTEDIPSPIHTTNNSGVPVEDNADTLAANHIEVPYADSAFTSSASPTDKSTPTKQQQHPPSSDTSGAGALSIPKMPRCSLTKDQKV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTACTGAAGATATTCCATCCCCTATTCATACTACTAACAATTCTGGTGTACCTGTAGAAGACAATGCTGATACCTTAGCTGCTAATCACATTGAAGTTCCTTACGC
TGATTCAGCTTTCACCTCATCTGCATCTCCTACTGATAAATCTACTCCAACTAAGCAGCAACAACACCCTCCATCAAGTGATACTAGTGGTGCTGGTGCTTTATCAATTC
CCAAAATGCCTCGTTGTTCGCTTACCAAAGATCAAAAGGTGGTTACCACAAAGGCGAGTCGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTACTGAAGATATTCCATCCCCTATTCATACTACTAACAATTCTGGTGTACCTGTAGAAGACAATGCTGATACCTTAGCTGCTAATCACATTGAAGTTCCTTACGC
TGATTCAGCTTTCACCTCATCTGCATCTCCTACTGATAAATCTACTCCAACTAAGCAGCAACAACACCCTCCATCAAGTGATACTAGTGGTGCTGGTGCTTTATCAATTC
CCAAAATGCCTCGTTGTTCGCTTACCAAAGATCAAAAGGTGGTTACCACAAAGGCGAGTCGCTAA
Protein sequenceShow/hide protein sequence
MSTEDIPSPIHTTNNSGVPVEDNADTLAANHIEVPYADSAFTSSASPTDKSTPTKQQQHPPSSDTSGAGALSIPKMPRCSLTKDQKVVTTKASR