; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0000645 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0000645
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionU1 small nuclear ribonucleoprotein 70 kDa
Genome locationchr08:5379488..5383965
RNA-Seq ExpressionIVF0000645
SyntenyIVF0000645
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0005685 - U1 snRNP (cellular component)
GO:0071004 - U2-type prespliceosome (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0030619 - U1 snRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR022023 - U1 small nuclear ribonucleoprotein of 70kDa N-terminal
IPR034143 - snRNP70, RNA recognition motif
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004143506.1 U1 small nuclear ribonucleoprotein 70 kDa [Cucumis sativus]0.097.44Show/hide
Query:  MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKPPPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPAE
        MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKPPPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETP E
Subjt:  MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKPPPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPAE

Query:  RRARIHLLRIEKGAEKAAEELPN---RDDPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQAD
        RRARIHLLRIEKGAEKAAEELP    RDDPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQAD
Subjt:  RRARIHLLRIEKGAEKAAEELPN---RDDPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQAD

Query:  GRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEENSQRHSGREQQQSGAPSRSEEPRAREDRHGERDREKSYDKGRDREREREKSREHSHERSK
        GRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEENSQRHSGREQQQSGAPSRSEEPR REDRHGERDREKSYDKGRDRER+REKSREHSHERSK
Subjt:  GRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEENSQRHSGREQQQSGAPSRSEEPRAREDRHGERDREKSYDKGRDREREREKSREHSHERSK

Query:  ERDVREDRHHRDRDRTRDRDRDRDR--ERDRDRGYDRDRTRDRGRDRGRDYERDRDRDRHRDRDRERDRDHEGGYPDPDRGRSHDRDDYDRVESKYEKDR
        ERDVREDRHHRDRDRTRDRDRDRDR  ERDRDRGYDRDRTRDRGRDRGRDYERDRDRDRHRDRDRER+RDHEGGYPDPDRGRSHDRDDYDRVESKYEKDR
Subjt:  ERDVREDRHHRDRDRTRDRDRDRDR--ERDRDRGYDRDRTRDRGRDRGRDYERDRDRDRHRDRDRERDRDHEGGYPDPDRGRSHDRDDYDRVESKYEKDR

Query:  HGDRDRDRDMDRAETEDGRGWYDQPEHGHRDADHDPQYYDHFEHNRGRGQYDQPEGHRDQDRYDQYDDRMDDDYHYERGNSESHDRERSRDLNHEYKRSE
        HGDRDR  D+DRAETEDGRGWYDQPEHGHRDADHDPQYYDHFEHNRGRGQYDQPEGHRDQDRYDQYDDRMDDDYHYERGNSESHDRERSRDLNHEYKRSE
Subjt:  HGDRDRDRDMDRAETEDGRGWYDQPEHGHRDADHDPQYYDHFEHNRGRGQYDQPEGHRDQDRYDQYDDRMDDDYHYERGNSESHDRERSRDLNHEYKRSE

Query:  RSHSREY
        RSHSREY
Subjt:  RSHSREY

XP_008440701.1 PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa [Cucumis melo]0.099.21Show/hide
Query:  MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKPPPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPAE
        MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKPPPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPAE
Subjt:  MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKPPPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPAE

Query:  RRARIHLLRIEKGAEKAAEELPN---RDDPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQAD
        RRARIHLLRIEKGAEKAAEELP    RDDPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQAD
Subjt:  RRARIHLLRIEKGAEKAAEELPN---RDDPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQAD

Query:  GRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEENSQRHSGREQQQSGAPSRSEEPRAREDRHGERDREKSYDKGRDREREREKSREHSHERSK
        GRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEENSQRHSGREQQQSGAPSRSEEPRAREDRHGERDREKSYDKGRDREREREKSREHSHERSK
Subjt:  GRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEENSQRHSGREQQQSGAPSRSEEPRAREDRHGERDREKSYDKGRDREREREKSREHSHERSK

Query:  ERDVREDRHHRDRDRTRDRDRDRDRERDRDRGYDRDRTRDRGRDRGRDYERDRDRDRHRDRDRERDRDHEGGYPDPDRGRSHDRDDYDRVESKYEKDRHG
        ERDVREDRHHRDRDRTRDRDRDRDRERDRDRGYDRDRTRDRGRDRGRDYERDRDRDRHRDRDRERDRDHEGGYPDPDRGRSHDRDDYDRVESKYEKDRHG
Subjt:  ERDVREDRHHRDRDRTRDRDRDRDRERDRDRGYDRDRTRDRGRDRGRDYERDRDRDRHRDRDRERDRDHEGGYPDPDRGRSHDRDDYDRVESKYEKDRHG

Query:  DRDRDRDMDRAETEDGRGWYDQPEHGHRDADHDPQYYDHFEHNRGRGQYDQPEGHRDQDRYDQYDDRMDDDYHYERGNSESHDRERSRDLNHEYKRSERS
        DRDRDRDMDRAETEDGRGWYDQPEHGHRDADHDPQYYDHFEHNRGRGQYDQPEGHRDQDRYDQYDDRMDDDYHYERGNSESHDRERSRDLNHEYKRSERS
Subjt:  DRDRDRDMDRAETEDGRGWYDQPEHGHRDADHDPQYYDHFEHNRGRGQYDQPEGHRDQDRYDQYDDRMDDDYHYERGNSESHDRERSRDLNHEYKRSERS

Query:  HSREY
        HSREY
Subjt:  HSREY

XP_022132461.1 U1 small nuclear ribonucleoprotein 70 kDa [Momordica charantia]1.44e-30991.62Show/hide
Query:  MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKPPPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPAE
        MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLE+KPPPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPA+
Subjt:  MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKPPPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPAE

Query:  RRARIHLLRIEKGAEKAAEELPN---RDDPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQAD
        RRARIHLLRIEKGAEKAAEELP    RDDPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQAD
Subjt:  RRARIHLLRIEKGAEKAAEELPN---RDDPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQAD

Query:  GRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEENSQRHSGREQQQSGAPSRSEEPRAREDRHGERDREKSYDKGRDREREREKSREHSHERSK
        GRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEN+QRHSGREQQQSGAPSRSEEPR REDRHGERDREKS++KGRDREREREKSRE SHERSK
Subjt:  GRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEENSQRHSGREQQQSGAPSRSEEPRAREDRHGERDREKSYDKGRDREREREKSREHSHERSK

Query:  ERDVREDRHHRDRDRTRDRDRDRDRERDRDRGYDRDRTRDR--GRDRGRDYERDRDRDR--HRDRDRERDRDHEGGYPDPDRGRSHDRD-DYDRVESKYE
        +RD+REDRHHRDRDRTRDRDRDR+RER+RDRGYDRD+TRDR  GRDRGRDYERDRDRDR  HRDRDRERDR+HE GYP+PDRGRSHDR+ DYDRVESKYE
Subjt:  ERDVREDRHHRDRDRTRDRDRDRDRERDRDRGYDRDRTRDR--GRDRGRDYERDRDRDR--HRDRDRERDRDHEGGYPDPDRGRSHDRD-DYDRVESKYE

Query:  KDRHGDRDRDRDMDRAETEDGRGWYDQPEHGHR--DADHDPQYYDHFEHNRGRGQYDQ-PEGHRDQDRYDQYDDRMDDDYHYERGNSESHDRERSRDLNH
        KDRHGDRDR  ++DR ETEDGRGWYDQ EHGHR  D DHDPQYYDHFEHNRGRGQYD  PEGH DQDRYDQYD RM+DDYHYERG SESHD+ERSRD+NH
Subjt:  KDRHGDRDRDRDMDRAETEDGRGWYDQPEHGHR--DADHDPQYYDHFEHNRGRGQYDQ-PEGHRDQDRYDQYDDRMDDDYHYERGNSESHDRERSRDLNH

Query:  EYKRSERSHSREY
        EY+RSERSHSREY
Subjt:  EYKRSERSHSREY

XP_023517571.1 U1 small nuclear ribonucleoprotein 70 kDa-like [Cucurbita pepo subsp. pepo]9.26e-29788.74Show/hide
Query:  MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKPPPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPAE
        MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLE+KPPPEKRKCPPLTGMAQFVS+FAEPDDPEYAPPVQ+GETP++
Subjt:  MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKPPPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPAE

Query:  RRARIHLLRIEKGAEKAAEELPN---RDDPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQAD
        RRARIHLLRIEKGA+KAAEELP    RDDPNVTGDPYKTLFVARLNYET+ESRIKREFESYGPIKRVRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQAD
Subjt:  RRARIHLLRIEKGAEKAAEELPN---RDDPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQAD

Query:  GRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEENSQRHSGREQQQSGAPSRSEEPRAREDRHGERDREKSYDKGRDREREREKSREHSHERSK
        GRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEENSQRH+GREQQQSGAPSRSEEPRAREDRHGERDREKSY+KGRDREREREKSRE SH+RSK
Subjt:  GRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEENSQRHSGREQQQSGAPSRSEEPRAREDRHGERDREKSYDKGRDREREREKSREHSHERSK

Query:  ERDVREDRHHRDRDRTRDRDRDRD--RERDRDRGYDRDRTRDR--GRDRGRDYERDRDRDR--HRDRDRERDRDHEGGYPDPDRGRSHDRD-DYDRVESK
        +RD+REDRHHRDRDRTRDRDRDR+  RER+RDRG+DRDRTRDR  GRDRGRDYERDRDRDR  HRDRDRER+RDHEGGY DPDRGRSHDR+ DYDRV+SK
Subjt:  ERDVREDRHHRDRDRTRDRDRDRD--RERDRDRGYDRDRTRDR--GRDRGRDYERDRDRDR--HRDRDRERDRDHEGGYPDPDRGRSHDRD-DYDRVESK

Query:  YEKDRHGDRDRDRDMDRAETEDGRGWYDQPEHGHR---DADHDPQYYDHFEHNRGRGQYDQPEGHRDQDRYDQYDDRMDDDYHYERGNSESHDRERSRDL
        YEKDRHGDR++  D+D  ETEDG GWYDQP HGHR   D DHDPQYYDHFEHNR R QYD PE H  QDRYDQYD RM+DDY YERG SE+ DRERSRDL
Subjt:  YEKDRHGDRDRDRDMDRAETEDGRGWYDQPEHGHR---DADHDPQYYDHFEHNRGRGQYDQPEGHRDQDRYDQYDDRMDDDYHYERGNSESHDRERSRDL

Query:  NHEYKRSERSHSREY
        NHEY+R+ERSHSREY
Subjt:  NHEYKRSERSHSREY

XP_038881482.1 U1 small nuclear ribonucleoprotein 70 kDa [Benincasa hispida]0.093.74Show/hide
Query:  MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKPPPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPAE
        MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKPPPEKRKCPPLTGMAQFVS+FAEPDDPEYAPPVQKGETPAE
Subjt:  MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKPPPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPAE

Query:  RRARIHLLRIEKGAEKAAEELPN---RDDPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQAD
        RRARIHLLRIEKGAEKAAEELP    RDDPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQAD
Subjt:  RRARIHLLRIEKGAEKAAEELPN---RDDPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQAD

Query:  GRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEENSQRHSGREQQQSGAPSRSEEPRAREDRHGERDREKSYDKGRDREREREKSREHSHERSK
        GRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEENSQRHSGREQQQ+GAPSRSEEPRAREDRH ERDREKSYDKGRDRER+REKSRE SHERSK
Subjt:  GRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEENSQRHSGREQQQSGAPSRSEEPRAREDRHGERDREKSYDKGRDREREREKSREHSHERSK

Query:  ERDVREDRHHRDRDRTRDRDRDRDRERDRDRGYDRDRTRDRGRDRGRDYERDRDRDR--HRDRDRERDRD--HEGGYPDPDRGRSHDRDDYDRVESKYEK
        +RDVREDRHHRDRDRTRDRDRDRDRERDR  GYDRDRTRDRGRDRGRD++RDRDRDR  HRDRDRERDRD  HEGGYPDPDRGRSHDRDDYDR+ESKYEK
Subjt:  ERDVREDRHHRDRDRTRDRDRDRDRERDRDRGYDRDRTRDRGRDRGRDYERDRDRDR--HRDRDRERDRD--HEGGYPDPDRGRSHDRDDYDRVESKYEK

Query:  DRHGDRDRDRDMDRAETEDGRGWYDQPEHGHR--DADHDPQYYDHFEHNRGRGQYDQPEGHRDQDRYDQYDDRMDDDYHYERGNSESHDRERSRDLNHEY
        DRHGDRDR  D+D AETEDGRGWYDQPEHGHR  D DHDPQYYDHFEHNR RGQYD  EGHRDQDRYDQYDDRM+DDY YERG SESHDRERSRDLNHEY
Subjt:  DRHGDRDRDRDMDRAETEDGRGWYDQPEHGHR--DADHDPQYYDHFEHNRGRGQYDQPEGHRDQDRYDQYDDRMDDDYHYERGNSESHDRERSRDLNHEY

Query:  KRSERSHSREY
        KRSERSHSREY
Subjt:  KRSERSHSREY

TrEMBL top hitse value%identityAlignment
A0A0A0KGZ1 RRM domain-containing protein1.8e-26397.44Show/hide
Query:  MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKPPPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPAE
        MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKPPPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETP E
Subjt:  MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKPPPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPAE

Query:  RRARIHLLRIEKGAEKAAEELP---NRDDPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQAD
        RRARIHLLRIEKGAEKAAEELP    RDDPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQAD
Subjt:  RRARIHLLRIEKGAEKAAEELP---NRDDPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQAD

Query:  GRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEENSQRHSGREQQQSGAPSRSEEPRAREDRHGERDREKSYDKGRDREREREKSREHSHERSK
        GRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEENSQRHSGREQQQSGAPSRSEEPR REDRHGERDREKSYDKGRDRER+REKSREHSHERSK
Subjt:  GRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEENSQRHSGREQQQSGAPSRSEEPRAREDRHGERDREKSYDKGRDREREREKSREHSHERSK

Query:  ERDVREDRHHRDRDRT--RDRDRDRDRERDRDRGYDRDRTRDRGRDRGRDYERDRDRDRHRDRDRERDRDHEGGYPDPDRGRSHDRDDYDRVESKYEKDR
        ERDVREDRHHRDRDRT  RDRDRDRDRERDRDRGYDRDRTRDRGRDRGRDYERDRDRDRHRDRDRER+RDHEGGYPDPDRGRSHDRDDYDRVESKYEKDR
Subjt:  ERDVREDRHHRDRDRT--RDRDRDRDRERDRDRGYDRDRTRDRGRDRGRDYERDRDRDRHRDRDRERDRDHEGGYPDPDRGRSHDRDDYDRVESKYEKDR

Query:  HGDRDRDRDMDRAETEDGRGWYDQPEHGHRDADHDPQYYDHFEHNRGRGQYDQPEGHRDQDRYDQYDDRMDDDYHYERGNSESHDRERSRDLNHEYKRSE
        HG  DRDRD+DRAETEDGRGWYDQPEHGHRDADHDPQYYDHFEHNRGRGQYDQPEGHRDQDRYDQYDDRMDDDYHYERGNSESHDRERSRDLNHEYKRSE
Subjt:  HGDRDRDRDMDRAETEDGRGWYDQPEHGHRDADHDPQYYDHFEHNRGRGQYDQPEGHRDQDRYDQYDDRMDDDYHYERGNSESHDRERSRDLNHEYKRSE

Query:  RSHSREY
        RSHSREY
Subjt:  RSHSREY

A0A1S3B1S2 U1 small nuclear ribonucleoprotein 70 kDa1.3e-26999.21Show/hide
Query:  MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKPPPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPAE
        MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKPPPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPAE
Subjt:  MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKPPPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPAE

Query:  RRARIHLLRIEKGAEKAAEELP---NRDDPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQAD
        RRARIHLLRIEKGAEKAAEELP    RDDPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQAD
Subjt:  RRARIHLLRIEKGAEKAAEELP---NRDDPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQAD

Query:  GRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEENSQRHSGREQQQSGAPSRSEEPRAREDRHGERDREKSYDKGRDREREREKSREHSHERSK
        GRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEENSQRHSGREQQQSGAPSRSEEPRAREDRHGERDREKSYDKGRDREREREKSREHSHERSK
Subjt:  GRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEENSQRHSGREQQQSGAPSRSEEPRAREDRHGERDREKSYDKGRDREREREKSREHSHERSK

Query:  ERDVREDRHHRDRDRTRDRDRDRDRERDRDRGYDRDRTRDRGRDRGRDYERDRDRDRHRDRDRERDRDHEGGYPDPDRGRSHDRDDYDRVESKYEKDRHG
        ERDVREDRHHRDRDRTRDRDRDRDRERDRDRGYDRDRTRDRGRDRGRDYERDRDRDRHRDRDRERDRDHEGGYPDPDRGRSHDRDDYDRVESKYEKDRHG
Subjt:  ERDVREDRHHRDRDRTRDRDRDRDRERDRDRGYDRDRTRDRGRDRGRDYERDRDRDRHRDRDRERDRDHEGGYPDPDRGRSHDRDDYDRVESKYEKDRHG

Query:  DRDRDRDMDRAETEDGRGWYDQPEHGHRDADHDPQYYDHFEHNRGRGQYDQPEGHRDQDRYDQYDDRMDDDYHYERGNSESHDRERSRDLNHEYKRSERS
        DRDRDRDMDRAETEDGRGWYDQPEHGHRDADHDPQYYDHFEHNRGRGQYDQPEGHRDQDRYDQYDDRMDDDYHYERGNSESHDRERSRDLNHEYKRSERS
Subjt:  DRDRDRDMDRAETEDGRGWYDQPEHGHRDADHDPQYYDHFEHNRGRGQYDQPEGHRDQDRYDQYDDRMDDDYHYERGNSESHDRERSRDLNHEYKRSERS

Query:  HSREY
        HSREY
Subjt:  HSREY

A0A6J1BSC4 U1 small nuclear ribonucleoprotein 70 kDa4.2e-24491.62Show/hide
Query:  MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKPPPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPAE
        MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLE+KPPPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPA+
Subjt:  MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKPPPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPAE

Query:  RRARIHLLRIEKGAEKAAEELP---NRDDPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQAD
        RRARIHLLRIEKGAEKAAEELP    RDDPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQAD
Subjt:  RRARIHLLRIEKGAEKAAEELP---NRDDPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQAD

Query:  GRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEENSQRHSGREQQQSGAPSRSEEPRAREDRHGERDREKSYDKGRDREREREKSREHSHERSK
        GRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEN+QRHSGREQQQSGAPSRSEEPR REDRHGERDREKS++KGRDREREREKSRE SHERSK
Subjt:  GRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEENSQRHSGREQQQSGAPSRSEEPRAREDRHGERDREKSYDKGRDREREREKSREHSHERSK

Query:  ERDVREDRHHRDRDRTRDRDRDRDRERDRDRGYDRDRT--RDRGRDRGRDYE--RDRDRDRHRDRDRERDRDHEGGYPDPDRGRSHDRD-DYDRVESKYE
        +RD+REDRHHRDRDRTRDRDRDR+RER+RDRGYDRD+T  RDRGRDRGRDYE  RDRDRDRHRDRDRERDR+HE GYP+PDRGRSHDR+ DYDRVESKYE
Subjt:  ERDVREDRHHRDRDRTRDRDRDRDRERDRDRGYDRDRT--RDRGRDRGRDYE--RDRDRDRHRDRDRERDRDHEGGYPDPDRGRSHDRD-DYDRVESKYE

Query:  KDRHGDRDRDRDMDRAETEDGRGWYDQPEHGHR--DADHDPQYYDHFEHNRGRGQY-DQPEGHRDQDRYDQYDDRMDDDYHYERGNSESHDRERSRDLNH
        KDRHG  DRDR++DR ETEDGRGWYDQ EHGHR  D DHDPQYYDHFEHNRGRGQY D PEGH DQDRYDQY DRM+DDYHYERG SESHD+ERSRD+NH
Subjt:  KDRHGDRDRDRDMDRAETEDGRGWYDQPEHGHR--DADHDPQYYDHFEHNRGRGQY-DQPEGHRDQDRYDQYDDRMDDDYHYERGNSESHDRERSRDLNH

Query:  EYKRSERSHSREY
        EY+RSERSHSREY
Subjt:  EYKRSERSHSREY

A0A6J1HIB1 U1 small nuclear ribonucleoprotein 70 kDa-like5.7e-23387.96Show/hide
Query:  MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKPPPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPAE
        MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLE+KPPPEKRKCPPLTGMAQFVS+FAEPDDPEYAPPVQ+GETP++
Subjt:  MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKPPPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPAE

Query:  RRARIHLLRIEKGAEKAAEELP---NRDDPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQAD
        RRARIHLLRIEKGA+KA EELP    RDDPNVTGDPYKTLFVARLNYET+ESRIKREFESYGPIKRVRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQAD
Subjt:  RRARIHLLRIEKGAEKAAEELP---NRDDPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQAD

Query:  GRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEENSQRHSGREQQQSGAPSRSEEPRAREDRHGERDREKSYDKGRDREREREKSREHSHERSK
        GRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEENSQRH+GREQQQSGAPSRSEEPRAREDRHGERDREKSY+KGRDREREREKSRE SH+RSK
Subjt:  GRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEENSQRHSGREQQQSGAPSRSEEPRAREDRHGERDREKSYDKGRDREREREKSREHSHERSK

Query:  ERDVREDRHHRDRDRT--RDRDRDRDRERDRDRGYDRDRT--RDRGRDRGRDYE--RDRDRDRHRDRDRERDRDHEGGYPDPDRGRSHDRD-DYDRVESK
        +RD+REDRHHRDRDRT  RDRDR+++RER+RDRG+DRDRT  RDRGRDRGRDYE  RDRDRDRHRDRDRERDRDHEGG+ DPDRGRSHDR+ DYDR++SK
Subjt:  ERDVREDRHHRDRDRT--RDRDRDRDRERDRDRGYDRDRT--RDRGRDRGRDYE--RDRDRDRHRDRDRERDRDHEGGYPDPDRGRSHDRD-DYDRVESK

Query:  YEKDRHGDRDRDRDMDRAETEDGRGWYDQPEHGHR---DADHDPQYYDHFEHNRGRGQYDQPEGHRDQDRYDQYDDRMDDDYHYERGNSESHDRERSRDL
        YEKDRHG  DRD+D+D  ETEDG GWYDQP HGHR   D DHDPQYYDHFEHNR R QYD PE H  QDRYDQY DRM+DDY YERG SE+ DRERSRDL
Subjt:  YEKDRHGDRDRDRDMDRAETEDGRGWYDQPEHGHR---DADHDPQYYDHFEHNRGRGQYDQPEGHRDQDRYDQYDDRMDDDYHYERGNSESHDRERSRDL

Query:  NHEYKRSERSHSREY
        NHEY+R+ERSHSRE+
Subjt:  NHEYKRSERSHSREY

A0A6J1KS72 U1 small nuclear ribonucleoprotein 70 kDa-like1.6e-23288.16Show/hide
Query:  MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKPPPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPAE
        MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLE+KPPPEKRKCPPLTGMAQFVS+FAEPDDPEYAPPVQ+GETP++
Subjt:  MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKPPPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPAE

Query:  RRARIHLLRIEKGAEKAAEELP---NRDDPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQAD
        RRARIHLLRIEKGA+KAAEELP    RDDPNVTGDPYKTLFVARLNYET+ESRIKREFESYGPIKRVRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQAD
Subjt:  RRARIHLLRIEKGAEKAAEELP---NRDDPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQAD

Query:  GRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEENSQRHSGREQQQSGAPSRSEEPRAREDRHGERDREKSYDKGRDREREREKSREHSHERSK
        GRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEENSQRH+GREQQQSGAPSRSEEPRAREDRHGERDREKSY+KGRDREREREKSRE SH+RSK
Subjt:  GRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEENSQRHSGREQQQSGAPSRSEEPRAREDRHGERDREKSYDKGRDREREREKSREHSHERSK

Query:  ERDVREDRHHRDRDRTRDRDRDR--DRERDRDRGYDRDRT--RDRGRDRGRDYE--RDRDRDRHRDRDRERDRDHEGGYPDPDRGRSHDRD-DYDRVESK
        + D+REDRHHRDRDRTRDRDRDR  +RER+R+RG+DRDRT  RDRGRDRGRDYE  RDRDRDRHRDRDRERDRDH GGY DPDRGRSHDR+ DYDRV+SK
Subjt:  ERDVREDRHHRDRDRTRDRDRDR--DRERDRDRGYDRDRT--RDRGRDRGRDYE--RDRDRDRHRDRDRERDRDHEGGYPDPDRGRSHDRD-DYDRVESK

Query:  YEKDRHGDRDRDRDMDRAETEDGRGWYDQPEHGHR---DADHDPQYYDHFEHNRGRGQYDQPEGHRDQDRYDQYDDRMDDDYHYERGNSESHDRERSRDL
        YEKDRHG  DRD+D+D  ETEDG GWYDQP HGHR   D DHDPQYYDHFEHNR R QYD PE H  QDRYDQY DRM+DDY YERG SE+ DRERSRDL
Subjt:  YEKDRHGDRDRDRDMDRAETEDGRGWYDQPEHGHR---DADHDPQYYDHFEHNRGRGQYDQPEGHRDQDRYDQYDDRMDDDYHYERGNSESHDRERSRDL

Query:  NHEYKRSERSHSREY
        NHEY+R++RSHSRE+
Subjt:  NHEYKRSERSHSREY

SwissProt top hitse value%identityAlignment
P08621 U1 small nuclear ribonucleoprotein 70 kDa1.4e-5545.6Show/hide
Query:  LTANLLKLFEPRPPLEFKP-----PPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPAERRARIHLLRIEKGAEKAAEELPNRD---DPNVTGDP
        L  NLL LF PR P+ + P     P EK    P  G+A ++  F   +DP  APP  + ET  ER  R    +IE+  ++   EL   D   DPN  GD 
Subjt:  LTANLLKLFEPRPPLEFKP-----PPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPAERRARIHLLRIEKGAEKAAEELPNRD---DPNVTGDP

Query:  YKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRV
        +KTLFVAR+NY+TTES+++REFE YGPIKR+ ++  K +GKP+GYAFIEY H+RDM +AYK ADG+KIDGRRVLVDVERGRTV  WRPRRLGGGLG TR 
Subjt:  YKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRV

Query:  GGEENSQRHSGRE--QQQSGAPSRSEEPRAREDRHGERD-REKSYDKGRDREREREKSREHSHERSKERDVREDRHHRDRDRTRDRDRDRDRERDRDRGY
        GG + + RHSGR+   +    P  S  P    DR  ER+ RE+S ++ ++RER R +SR+    RS+ RD  E R  R+R + +DRDR R   R R+R  
Subjt:  GGEENSQRHSGRE--QQQSGAPSRSEEPRAREDRHGERD-REKSYDKGRDREREREKSREHSHERSKERDVREDRHHRDRDRTRDRDRDRDRERDRDRGY

Query:  DRDRTRDRGRDRGRDY-ERDRDRDRHRDRDRERDRDHEGGYPDPDRGRSHDRDDYDRVESKYEKDRHGDRDRDRDMDRAETEDGRG
             ++  R  G D  E     D   D     +   +G  PD    +  DRD   R   + E++R  DRDRDRD DR      RG
Subjt:  DRDRTRDRGRDRGRDY-ERDRDRDRHRDRDRERDRDHEGGYPDPDRGRSHDRDDYDRVESKYEKDRHGDRDRDRDMDRAETEDGRG

P09406 U1 small nuclear ribonucleoprotein 70 kDa2.9e-5641.55Show/hide
Query:  LTANLLKLFEPRPPLEFKP-----PPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPAERRARIHLLRIEKGAEKAAEELPNRD---DPNVTGDP
        L  NLL LF PR P+ + P     P EK    P  G+A ++  F   +DP  APP  + ET  ER  R    +IE+  +    EL   D   D N  GD 
Subjt:  LTANLLKLFEPRPPLEFKP-----PPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPAERRARIHLLRIEKGAEKAAEELPNRD---DPNVTGDP

Query:  YKTLFVARLNYETTESRIKREFESYGPIKRVRLITDK---VTGKPKGYAFIEYMHKRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGT
        +KTLFVAR+NY+TTES+++REFE YGPIKR+ ++ +K    +GKP+GYAFIEY H+RDM +AYK ADG+KIDGRRVLVDVERGRTV  WRPRRLGGGLG 
Subjt:  YKTLFVARLNYETTESRIKREFESYGPIKRVRLITDK---VTGKPKGYAFIEYMHKRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGT

Query:  TRVGGEENSQRHSGREQQQSGAPSRSEEPRAREDRHGERDREKSYDKGRDREREREKS-REHSHERSKERDVR-EDRHHRDRDRTRDRDRDRDRERDRDR
        TR GG + + RHSGR+                  R+ ERDRE+  D+ R+R REREK  RE    RS+ER  +   R   +R RTR++ +D+D+E+D+D 
Subjt:  TRVGGEENSQRHSGREQQQSGAPSRSEEPRAREDRHGERDREKSYDKGRDREREREKS-REHSHERSKERDVR-EDRHHRDRDRTRDRDRDRDRERDRDR

Query:  GYDRDRTRDRGRDRGRDYERDRDR---------------------------------------DRHRDRDRERDRDHEGGYPDPDRGRSHDRDDYDRVES
          DRDR R R R R R  ERDRDR                                       ++ R+RDRERDRD E G  D D+ R  DR   DR  S
Subjt:  GYDRDRTRDRGRDRGRDYERDRDR---------------------------------------DRHRDRDRERDRDHEGGYPDPDRGRSHDRDDYDRVES

Query:  KYEKDRHGDRDRDRDMDRAETEDGRGWYDQPEHGHRDADHDPQYYDHFEHNRGRGQYDQPEGHRDQDRYDQYDDRMDDDYHYERGNSESHD
          ++DR  DRDRDRD  R          D+     RD DH        E +RG     + E   D     +  +    D + ++ + +S D
Subjt:  KYEKDRHGDRDRDRDMDRAETEDGRGWYDQPEHGHRDADHDPQYYDHFEHNRGRGQYDQPEGHRDQDRYDQYDDRMDDDYHYERGNSESHD

Q42404 U1 small nuclear ribonucleoprotein 70 kDa2.7e-12366.98Show/hide
Query:  MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKPPPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPAE
        MGD  D F+RN NAAVQAR K QNRANVLQLKL+GQSHPTGLT NLLKLFEPRPPLE+KPPPEKRKCPP TGMAQFVSNFAEP DPEYAPP  + E P++
Subjt:  MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKPPPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPAE

Query:  RRARIHLLRIEKGAEKAAEELPNRD---DPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQAD
        +R RIH LR+EKG EKAAE+L   D   DPN TGDPYKTLFV+RLNYE++ES+IKREFESYGPIKRV L+TD++T KPKGYAFIEYMH RDMKAAYKQAD
Subjt:  RRARIHLLRIEKGAEKAAEELPNRD---DPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQAD

Query:  GRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEENSQRHSGREQQQSGAPSRSEEP-RAREDRHGERDREKSYDKGRDREREREKSREHSHERS
        G+KIDGRRVLVDVERGRTVPNWRPRRLGGGLGT+RVGG E        EQQ  G  S+SEEP R RE      +REKS +KG++RER RE S E   ERS
Subjt:  GRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEENSQRHSGREQQQSGAPSRSEEP-RAREDRHGERDREKSYDKGRDREREREKSREHSHERS

Query:  KERDVREDRHHRDRD---RTRDRDRDRDRERDRDRGYDRDRTRDRGRDRGRDYERDRDRDRHRDRDRERDRDHEGG-YPDPDRGRSHDRDDYDRVESK--
        ++R  RED+HHRDRD   R RDRD  RDR+R RDRG DRDR   R RDRGRD      RD  RDR R+++RD+EGG Y     GRS +RD   R E +  
Subjt:  KERDVREDRHHRDRD---RTRDRDRDRDRERDRDRGYDRDRTRDRGRDRGRDYERDRDRDRHRDRDRERDRDHEGG-YPDPDRGRSHDRDDYDRVESK--

Query:  --YEKDRHGDRDR-DRDMDRAETEDGR
          Y +D  GD DR     D+ E +D R
Subjt:  --YEKDRHGDRDR-DRDMDRAETEDGR

Q62376 U1 small nuclear ribonucleoprotein 70 kDa2.3e-5342.06Show/hide
Query:  LTANLLKLFEPRPPLEFKP-----PPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPAERRARIHLLRIEKGAEKAAEELPNRD---DPNVTGDP
        L  NLL LF PR P+ + P     P EK    P  G+A ++  F   +DP  APP  + ET  ER  R    +IE+  ++   EL   D   DPN  GD 
Subjt:  LTANLLKLFEPRPPLEFKP-----PPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPAERRARIHLLRIEKGAEKAAEELPNRD---DPNVTGDP

Query:  YKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRV
        +KTLFVAR+NY+TTES+++REFE YGPIKR+ ++  K +GKP+GYAFIEY H+RDM +AYK ADG+KIDGRRVLVDVERGRTV  WRPRRLGGGLG TR 
Subjt:  YKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRV

Query:  GGEENSQRHSGRE--QQQSGAPSRSEEPRAREDRHGERD-REKSYDKGRDREREREKSREHSHERSKERDVREDRHHRDRDRTRDRDRDRDRERDRDRGY
        GG + + RHSGR+   +    P  S  P    DR  ER+ RE+S ++ ++RER R +SR+    RS+ RD  E R  R+R + +DRDR R   R R+R  
Subjt:  GGEENSQRHSGRE--QQQSGAPSRSEEPRAREDRHGERD-REKSYDKGRDREREREKSREHSHERSKERDVREDRHHRDRDRTRDRDRDRDRERDRDRGY

Query:  DRDRTR---------------------------------------------------DRGRDRGRDYERDR--DRDRHRDRDRERDRDHEGGYPDPDRGR
         R+R R                                                   ++GRDR R+  R    +R+R RDRDR+RDR+H+ G    +RGR
Subjt:  DRDRTR---------------------------------------------------DRGRDRGRDYERDR--DRDRHRDRDRERDRDHEGGYPDPDRGR

Query:  SHDRDDYDRVESKYEKDRHGDRDRDRDMDRAETEDGRGWYDQPEHGH
           R       S  +    G     RDM   E E G G Y  PE+G+
Subjt:  SHDRDDYDRVESKYEKDRHGDRDRDRDMDRAETEDGRGWYDQPEHGH

Q66II8 U1 small nuclear ribonucleoprotein 70 kDa1.0e-5842.98Show/hide
Query:  LTANLLKLFEPRPPLEFKP-----PPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPAERRARIHLLRIEKGAEKAAEELPNRD---DPNVTGDP
        L  NLL LF PR P+ + P     P EK    P  G+A ++  F   +DP  APP  + ET  ER  R    +IE+  +    EL   D   D N  GD 
Subjt:  LTANLLKLFEPRPPLEFKP-----PPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPAERRARIHLLRIEKGAEKAAEELPNRD---DPNVTGDP

Query:  YKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRV
        +KTLFVAR+NY+TTES+++REFE YGPIKR+ ++ +K +GKP+GYAFIEY H+RDM +AYK ADG+KIDGRRVLVDVERGRTV  WRPRRLGGGLG TR 
Subjt:  YKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRV

Query:  GGEENSQRHSGREQQQSGAPSRSEEPRAREDRHGERD-REKSYDKGRDREREREKSREHSHERSKERDVREDRHHRDRDRTRDRDRDRDRERDRDRGYDR
        GG + + RHSGR+       SR +E     DR  ERD RE+S ++ ++RER R +SRE    RS+ R+  E +  R+R R +D+D+D+D+++++D+  DR
Subjt:  GGEENSQRHSGREQQQSGAPSRSEEPRAREDRHGERD-REKSYDKGRDREREREKSREHSHERSKERDVREDRHHRDRDRTRDRDRDRDRERDRDRGYDR

Query:  DRTRDRGRDRGRDYERDRDRDRHRDRDRERDRDHEGGYPDPDRGRSHDRDDYDRVESKYE-KDRHGDRDRDRDMDRAETEDGRGWYDQPEHGHRDADHDP
        DR R   R R R+ +R+RDRDR +  DR      E      D  ++ D    D +E K E ++++ DRDR+RD ++   +D            RD D D 
Subjt:  DRTRDRGRDRGRDYERDRDRDRHRDRDRERDRDHEGGYPDPDRGRSHDRDDYDRVESKYE-KDRHGDRDRDRDMDRAETEDGRGWYDQPEHGHRDADHDP

Query:  QYYDHFEHNRGRGQYDQPEGHRDQDRYDQYDDRMDDDYHYERGNSESHDRERSRDLNHEYKRSERSHSRE
                 R R   D+    RD+DR    D R D D           DR+R RD   E  R +R   RE
Subjt:  QYYDHFEHNRGRGQYDQPEGHRDQDRYDQYDDRMDDDYHYERGNSESHDRERSRDLNHEYKRSERSHSRE

Arabidopsis top hitse value%identityAlignment
AT2G43370.1 RNA-binding (RRM/RBD/RNP motifs) family protein3.6e-1433.85Show/hide
Query:  DPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLG
        D    GDPY TLFV RL++ TTE  ++     YG IK +RL+   VTG  +GY F+EY  +++M  AY+ A    IDGR ++VD  R + +P W PRRLG
Subjt:  DPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLG

Query:  GGL------GTTRVGGEENSQR-------------------HSGREQQQSGAPSRSEEPRAREDRHGERDREKSYDKGRDREREREKSRE-HSHERSKER
        GGL      G  R GG +   R                     GR   ++  PS      +  DR  E  REKS  +  +  +ER   R  HSH  S   
Subjt:  GGL------GTTRVGGEENSQR-------------------HSGREQQQSGAPSRSEEPRAREDRHGERDREKSYDKGRDREREREKSRE-HSHERSKER

Query:  DVREDRHHRDRD---RTRDRDRDRDRERDRDRGYDRDRTRDRGRDRGRDYERDRDRDRHR
             R  +DR+   R   R   ++R R  +  Y  ++    G  R +  E DR R RH+
Subjt:  DVREDRHHRDRD---RTRDRDRDRDRERDRDRGYDRDRTRDRGRDRGRDYERDRDRDRHR

AT3G50670.1 U1 small nuclear ribonucleoprotein-70K1.9e-12466.98Show/hide
Query:  MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKPPPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPAE
        MGD  D F+RN NAAVQAR K QNRANVLQLKL+GQSHPTGLT NLLKLFEPRPPLE+KPPPEKRKCPP TGMAQFVSNFAEP DPEYAPP  + E P++
Subjt:  MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKPPPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPAE

Query:  RRARIHLLRIEKGAEKAAEELPNRD---DPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQAD
        +R RIH LR+EKG EKAAE+L   D   DPN TGDPYKTLFV+RLNYE++ES+IKREFESYGPIKRV L+TD++T KPKGYAFIEYMH RDMKAAYKQAD
Subjt:  RRARIHLLRIEKGAEKAAEELPNRD---DPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQAD

Query:  GRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEENSQRHSGREQQQSGAPSRSEEP-RAREDRHGERDREKSYDKGRDREREREKSREHSHERS
        G+KIDGRRVLVDVERGRTVPNWRPRRLGGGLGT+RVGG E        EQQ  G  S+SEEP R RE      +REKS +KG++RER RE S E   ERS
Subjt:  GRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEENSQRHSGREQQQSGAPSRSEEP-RAREDRHGERDREKSYDKGRDREREREKSREHSHERS

Query:  KERDVREDRHHRDRD---RTRDRDRDRDRERDRDRGYDRDRTRDRGRDRGRDYERDRDRDRHRDRDRERDRDHEGG-YPDPDRGRSHDRDDYDRVESK--
        ++R  RED+HHRDRD   R RDRD  RDR+R RDRG DRDR   R RDRGRD      RD  RDR R+++RD+EGG Y     GRS +RD   R E +  
Subjt:  KERDVREDRHHRDRD---RTRDRDRDRDRERDRDRGYDRDRTRDRGRDRGRDYERDRDRDRHRDRDRERDRDHEGG-YPDPDRGRSHDRDDYDRVESK--

Query:  --YEKDRHGDRDR-DRDMDRAETEDGR
          Y +D  GD DR     D+ E +D R
Subjt:  --YEKDRHGDRDR-DRDMDRAETEDGR

AT3G50670.2 U1 small nuclear ribonucleoprotein-70K1.2e-7078.44Show/hide
Query:  MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKPPPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPAE
        MGD  D F+RN NAAVQAR K QNRANVLQLKL+GQSHPTGLT NLLKLFEPRPPLE+KPPPEKRKCPP TGMAQFVSNFAEP DPEYAPP  + E P++
Subjt:  MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKPPPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPAE

Query:  RRARIHLLRIEKGAEKAAEELPNRD---DPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRV
        +R RIH LR+EKG EKAAE+L   D   DPN TGDPYKTLFV+RLNYE++ES+IKREFESYGPIKRV
Subjt:  RRARIHLLRIEKGAEKAAEELPNRD---DPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRV

AT5G53440.1 unknown protein1.1e-0541.67Show/hide
Query:  QQSGAPSRSEEP---RAREDRHGERDREKSYDKGRDREREREKSRE----HSHERSKERDVREDRHHRDRDRTRDRDRDRDRERDRDRGYDRDRTRDRGR
        +Q G   R + P     R D    RD  K   K +D +   E   E    H  ER+++ D   DR+ RDR+RTRDRDRD +R+RDRDR  DRDR RDR R
Subjt:  QQSGAPSRSEEP---RAREDRHGERDREKSYDKGRDREREREKSRE----HSHERSKERDVREDRHHRDRDRTRDRDRDRDRERDRDRGYDRDRTRDRGR

Query:  DRGRDYERDR--DRDRHRDRDRERDRDHEGGYPDPDRGRSHDRDDYDRVESKYE--KDRHGDRDRDRDMDRAETEDGRGWYDQPEHGHRDADHDPQYYDH
           RDYE DR  DRD  RDR R+RDRDHE       R R+HDR+  DR    Y   K    DR+RD D D +  +D  G Y       RD    P Y D+
Subjt:  DRGRDYERDR--DRDRHRDRDRERDRDHEGGYPDPDRGRSHDRDDYDRVESKYE--KDRHGDRDRDRDMDRAETEDGRGWYDQPEHGHRDADHDPQYYDH

Query:  FEHNRG-RGQYDQPEG
         +   G R    +P+G
Subjt:  FEHNRG-RGQYDQPEG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGATTACAATGATGCCTTCATGCGGAACCAAAACGCCGCCGTTCAGGCTCGTACTAAGGCCCAGAATCGTGCCAATGTCCTTCAACTCAAGCTGATTGGGCAGAG
TCATCCTACTGGTCTAACGGCCAATCTCTTGAAGCTCTTTGAGCCCCGACCGCCTCTGGAGTTCAAACCTCCACCAGAGAAAAGAAAATGTCCACCATTAACAGGGATGG
CCCAGTTTGTGAGTAATTTTGCAGAACCTGATGATCCAGAATATGCTCCCCCTGTTCAAAAGGGTGAAACTCCAGCGGAAAGGAGGGCTAGAATTCACTTGCTAAGAATT
GAAAAGGGTGCAGAGAAAGCTGCTGAGGAGCTGCCAAATCGTGATGATCCAAATGTTACTGGAGATCCATACAAAACACTCTTTGTGGCCAGACTGAATTATGAGACAAC
TGAGAGCCGAATCAAAAGAGAGTTTGAATCTTATGGGCCAATCAAGCGGGTCCGATTGATTACAGACAAAGTGACAGGTAAACCTAAAGGCTATGCTTTCATCGAGTACA
TGCACAAAAGAGATATGAAAGCTGCATATAAGCAAGCTGATGGCAGGAAGATTGATGGTAGAAGGGTACTTGTGGATGTCGAGCGAGGTAGAACAGTACCAAATTGGCGT
CCCCGCCGTCTGGGTGGAGGTCTTGGAACTACCAGAGTGGGAGGTGAAGAAAATAGCCAGAGGCATTCTGGAAGGGAACAACAGCAGTCTGGTGCACCATCCAGATCAGA
GGAGCCTAGGGCTCGAGAAGATCGTCATGGAGAGCGAGATAGGGAAAAGTCTTATGACAAGGGAAGAGACCGAGAAAGAGAGAGAGAGAAGTCTCGTGAACATTCCCATG
AGAGATCTAAGGAGCGTGATGTCAGAGAGGACAGGCATCACAGAGACCGTGATAGGACTAGAGATAGAGATAGGGATAGGGATAGAGAGAGAGATCGAGATCGTGGCTAT
GACCGCGATAGAACACGTGATCGAGGAAGGGATCGAGGTCGTGACTATGAGCGTGACAGAGATCGGGATCGTCATCGGGATAGAGATAGGGAGAGGGATCGGGATCATGA
AGGGGGATATCCAGACCCTGATCGCGGTCGCTCTCACGATAGGGACGACTATGATCGTGTCGAGTCAAAATATGAGAAGGATAGACATGGTGATAGGGATAGAGATAGGG
ATATGGATCGTGCAGAAACTGAGGATGGTCGTGGGTGGTATGATCAGCCTGAGCATGGGCACAGAGATGCTGATCATGATCCCCAGTACTACGACCACTTTGAACATAAC
CGAGGTCGAGGGCAATATGATCAACCAGAAGGCCACCGTGACCAAGATCGTTATGATCAGTATGATGACAGAATGGACGATGATTATCATTATGAGCGTGGGAATTCTGA
ATCACATGATAGAGAGAGGTCTCGTGATTTGAATCACGAATATAAGCGCAGTGAGAGATCTCATTCGAGAGAGTACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGGATTACAATGATGCCTTCATGCGGAACCAAAACGCCGCCGTTCAGGCTCGTACTAAGGCCCAGAATCGTGCCAATGTCCTTCAACTCAAGCTGATTGGGCAGAG
TCATCCTACTGGTCTAACGGCCAATCTCTTGAAGCTCTTTGAGCCCCGACCGCCTCTGGAGTTCAAACCTCCACCAGAGAAAAGAAAATGTCCACCATTAACAGGGATGG
CCCAGTTTGTGAGTAATTTTGCAGAACCTGATGATCCAGAATATGCTCCCCCTGTTCAAAAGGGTGAAACTCCAGCGGAAAGGAGGGCTAGAATTCACTTGCTAAGAATT
GAAAAGGGTGCAGAGAAAGCTGCTGAGGAGCTGCCAAATCGTGATGATCCAAATGTTACTGGAGATCCATACAAAACACTCTTTGTGGCCAGACTGAATTATGAGACAAC
TGAGAGCCGAATCAAAAGAGAGTTTGAATCTTATGGGCCAATCAAGCGGGTCCGATTGATTACAGACAAAGTGACAGGTAAACCTAAAGGCTATGCTTTCATCGAGTACA
TGCACAAAAGAGATATGAAAGCTGCATATAAGCAAGCTGATGGCAGGAAGATTGATGGTAGAAGGGTACTTGTGGATGTCGAGCGAGGTAGAACAGTACCAAATTGGCGT
CCCCGCCGTCTGGGTGGAGGTCTTGGAACTACCAGAGTGGGAGGTGAAGAAAATAGCCAGAGGCATTCTGGAAGGGAACAACAGCAGTCTGGTGCACCATCCAGATCAGA
GGAGCCTAGGGCTCGAGAAGATCGTCATGGAGAGCGAGATAGGGAAAAGTCTTATGACAAGGGAAGAGACCGAGAAAGAGAGAGAGAGAAGTCTCGTGAACATTCCCATG
AGAGATCTAAGGAGCGTGATGTCAGAGAGGACAGGCATCACAGAGACCGTGATAGGACTAGAGATAGAGATAGGGATAGGGATAGAGAGAGAGATCGAGATCGTGGCTAT
GACCGCGATAGAACACGTGATCGAGGAAGGGATCGAGGTCGTGACTATGAGCGTGACAGAGATCGGGATCGTCATCGGGATAGAGATAGGGAGAGGGATCGGGATCATGA
AGGGGGATATCCAGACCCTGATCGCGGTCGCTCTCACGATAGGGACGACTATGATCGTGTCGAGTCAAAATATGAGAAGGATAGACATGGTGATAGGGATAGAGATAGGG
ATATGGATCGTGCAGAAACTGAGGATGGTCGTGGGTGGTATGATCAGCCTGAGCATGGGCACAGAGATGCTGATCATGATCCCCAGTACTACGACCACTTTGAACATAAC
CGAGGTCGAGGGCAATATGATCAACCAGAAGGCCACCGTGACCAAGATCGTTATGATCAGTATGATGACAGAATGGACGATGATTATCATTATGAGCGTGGGAATTCTGA
ATCACATGATAGAGAGAGGTCTCGTGATTTGAATCACGAATATAAGCGCAGTGAGAGATCTCATTCGAGAGAGTACTAA
Protein sequenceShow/hide protein sequence
MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKPPPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPAERRARIHLLRI
EKGAEKAAEELPNRDDPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWR
PRRLGGGLGTTRVGGEENSQRHSGREQQQSGAPSRSEEPRAREDRHGERDREKSYDKGRDREREREKSREHSHERSKERDVREDRHHRDRDRTRDRDRDRDRERDRDRGY
DRDRTRDRGRDRGRDYERDRDRDRHRDRDRERDRDHEGGYPDPDRGRSHDRDDYDRVESKYEKDRHGDRDRDRDMDRAETEDGRGWYDQPEHGHRDADHDPQYYDHFEHN
RGRGQYDQPEGHRDQDRYDQYDDRMDDDYHYERGNSESHDRERSRDLNHEYKRSERSHSREY