; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0000668 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0000668
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationchr01:25548042..25548992
RNA-Seq ExpressionIVF0000668
SyntenyIVF0000668
Gene Ontology termsGO:0000373 - Group II intron splicing (biological process)
GO:0009658 - chloroplast organization (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily
IPR044190 - Protein THYLAKOID ASSEMBLY 8-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK08129.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]2.44e-16799.6Show/hide
Query:  MSFLLTLPSPTILSPPLKLPSSVRKPCCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR
        MSFLLTLPSPTILSPPLKLPSSVRKPCCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR
Subjt:  MSFLLTLPSPTILSPPLKLPSSVRKPCCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR

Query:  ELLRQNECSLALKVFEDVRNEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAETDLAPEIDGFNALLKALVGHNLGKLAMESYYLMKEVGCEPNKA
        ELLRQNECSLALKVFEDVRNEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAETDLAPEIDGFNALLK LVGHNLGKLAMESYYLMKEVGCEPNKA
Subjt:  ELLRQNECSLALKVFEDVRNEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAETDLAPEIDGFNALLKALVGHNLGKLAMESYYLMKEVGCEPNKA

Query:  SFRIVIKGLELKGEAVDLRTVKQDAQKLYGESLEFLEEAEEGATAISIH
        SFRIVIKGLELKGEAVDLRTVKQDAQKLYGESLEFLEEAEEGATAISIH
Subjt:  SFRIVIKGLELKGEAVDLRTVKQDAQKLYGESLEFLEEAEEGATAISIH

XP_008451190.1 PREDICTED: pentatricopeptide repeat-containing protein At3g46870-like [Cucumis melo]5.99e-168100Show/hide
Query:  MSFLLTLPSPTILSPPLKLPSSVRKPCCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR
        MSFLLTLPSPTILSPPLKLPSSVRKPCCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR
Subjt:  MSFLLTLPSPTILSPPLKLPSSVRKPCCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR

Query:  ELLRQNECSLALKVFEDVRNEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAETDLAPEIDGFNALLKALVGHNLGKLAMESYYLMKEVGCEPNKA
        ELLRQNECSLALKVFEDVRNEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAETDLAPEIDGFNALLKALVGHNLGKLAMESYYLMKEVGCEPNKA
Subjt:  ELLRQNECSLALKVFEDVRNEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAETDLAPEIDGFNALLKALVGHNLGKLAMESYYLMKEVGCEPNKA

Query:  SFRIVIKGLELKGEAVDLRTVKQDAQKLYGESLEFLEEAEEGATAISIH
        SFRIVIKGLELKGEAVDLRTVKQDAQKLYGESLEFLEEAEEGATAISIH
Subjt:  SFRIVIKGLELKGEAVDLRTVKQDAQKLYGESLEFLEEAEEGATAISIH

XP_022952712.1 protein THYLAKOID ASSEMBLY 8-like, chloroplastic [Cucurbita moschata]5.44e-13283.13Show/hide
Query:  MSFLLTLPSPTILSPPLKLPSSVRKPCCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR
        MSFL T PS TILSPP  L  S  K   L+LGR EGY RVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKR KKDLQQLDRVYDSKIRRLLKFDM+AVLR
Subjt:  MSFLLTLPSPTILSPPLKLPSSVRKPCCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR

Query:  ELLRQNECSLALKVFEDVRNEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAETDLAPEIDGFNALLKALVGHNLGKLAMESYYLMKEVGCEPNKA
        ELLRQNECSLALKVFEDVR E WYKPQVSLYADI++VLASNGLFE+VQII SY KAETDLAPEI+GFN LLKALV +NLG+LAMESYYLMKEVGCEP+K 
Subjt:  ELLRQNECSLALKVFEDVRNEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAETDLAPEIDGFNALLKALVGHNLGKLAMESYYLMKEVGCEPNKA

Query:  SFRIVIKGLELKGEAVDLRTVKQDAQKLYGESLEFLEEAEEGATAISIH
        SFRIVIKGLE   E+VDLRTVK+DAQ+LYGESLEFLEE +E AT IS H
Subjt:  SFRIVIKGLELKGEAVDLRTVKQDAQKLYGESLEFLEEAEEGATAISIH

XP_031744771.1 protein THYLAKOID ASSEMBLY 8-like, chloroplastic [Cucumis sativus]2.01e-15092.34Show/hide
Query:  MSFLLTLPSPTILSPPLKLPSSVRKPCCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR
        MSFL T  SPTI SP LK PSSV   CCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR
Subjt:  MSFLLTLPSPTILSPPLKLPSSVRKPCCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR

Query:  ELLRQNECSLALKVFEDVRNEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAETDLAPEIDGFNALLKALVGHNLGKLAMESYYLMKEVGCEPNKA
        ELLRQNECSLALKVFEDVR EHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAE DLAPEIDGFNALLKALV HNLG+LAMESYYLMK+VGCEP+KA
Subjt:  ELLRQNECSLALKVFEDVRNEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAETDLAPEIDGFNALLKALVGHNLGKLAMESYYLMKEVGCEPNKA

Query:  SFRIVIKGLELKGEAVDLRTVKQDAQKLYGESLEFLEEAEEGATAISI
        SFRIVIKGLE KGEAVDLRTVKQDAQ+LYGESLEFLEE EEGATA SI
Subjt:  SFRIVIKGLELKGEAVDLRTVKQDAQKLYGESLEFLEEAEEGATAISI

XP_038888189.1 protein THYLAKOID ASSEMBLY 8, chloroplastic-like [Benincasa hispida]2.50e-14489.16Show/hide
Query:  MSFLLTLPSPTILSPPLKLPSSVRKPCCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR
        MSFL+  PSPTILSP  KL SS  +  CL LGRAEGY +VTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDM+AVLR
Subjt:  MSFLLTLPSPTILSPPLKLPSSVRKPCCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR

Query:  ELLRQNECSLALKVFEDVRNEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAETDLAPEIDGFNALLKALVGHNLGKLAMESYYLMKEVGCEPNKA
        ELLRQNECSLALKVFEDVRNEHWYKPQVSLYADII VLASNGLFERVQII SY+KAETDLAPEIDGFNALLKALV HNLG+LAMESYYLMKE+GCEP+KA
Subjt:  ELLRQNECSLALKVFEDVRNEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAETDLAPEIDGFNALLKALVGHNLGKLAMESYYLMKEVGCEPNKA

Query:  SFRIVIKGLELKGEAVDLRTVKQDAQKLYGESLEFLEEAEEGATAISIH
        SFRIVIKGLE KGEAVDLRTVKQDAQKLYGESLEFLEE EE A AIS H
Subjt:  SFRIVIKGLELKGEAVDLRTVKQDAQKLYGESLEFLEEAEEGATAISIH

TrEMBL top hitse value%identityAlignment
A0A0A0K6A9 Uncharacterized protein6.1e-11992.34Show/hide
Query:  MSFLLTLPSPTILSPPLKLPSSVRKPCCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR
        MSFL T  SPTI SP LK PSSV   CCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR
Subjt:  MSFLLTLPSPTILSPPLKLPSSVRKPCCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR

Query:  ELLRQNECSLALKVFEDVRNEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAETDLAPEIDGFNALLKALVGHNLGKLAMESYYLMKEVGCEPNKA
        ELLRQNECSLALKVFEDVR EHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAE DLAPEIDGFNALLKALV HNLG+LAMESYYLMK+VGCEP+KA
Subjt:  ELLRQNECSLALKVFEDVRNEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAETDLAPEIDGFNALLKALVGHNLGKLAMESYYLMKEVGCEPNKA

Query:  SFRIVIKGLELKGEAVDLRTVKQDAQKLYGESLEFLEEAEEGATAISI
        SFRIVIKGLE KGEAVDLRTVKQDAQ+LYGESLEFLEE EEGATA SI
Subjt:  SFRIVIKGLELKGEAVDLRTVKQDAQKLYGESLEFLEEAEEGATAISI

A0A1S3BRZ8 pentatricopeptide repeat-containing protein At3g46870-like2.8e-132100Show/hide
Query:  MSFLLTLPSPTILSPPLKLPSSVRKPCCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR
        MSFLLTLPSPTILSPPLKLPSSVRKPCCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR
Subjt:  MSFLLTLPSPTILSPPLKLPSSVRKPCCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR

Query:  ELLRQNECSLALKVFEDVRNEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAETDLAPEIDGFNALLKALVGHNLGKLAMESYYLMKEVGCEPNKA
        ELLRQNECSLALKVFEDVRNEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAETDLAPEIDGFNALLKALVGHNLGKLAMESYYLMKEVGCEPNKA
Subjt:  ELLRQNECSLALKVFEDVRNEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAETDLAPEIDGFNALLKALVGHNLGKLAMESYYLMKEVGCEPNKA

Query:  SFRIVIKGLELKGEAVDLRTVKQDAQKLYGESLEFLEEAEEGATAISIH
        SFRIVIKGLELKGEAVDLRTVKQDAQKLYGESLEFLEEAEEGATAISIH
Subjt:  SFRIVIKGLELKGEAVDLRTVKQDAQKLYGESLEFLEEAEEGATAISIH

A0A5A7UZI6 Pentatricopeptide repeat-containing protein2.8e-132100Show/hide
Query:  MSFLLTLPSPTILSPPLKLPSSVRKPCCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR
        MSFLLTLPSPTILSPPLKLPSSVRKPCCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR
Subjt:  MSFLLTLPSPTILSPPLKLPSSVRKPCCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR

Query:  ELLRQNECSLALKVFEDVRNEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAETDLAPEIDGFNALLKALVGHNLGKLAMESYYLMKEVGCEPNKA
        ELLRQNECSLALKVFEDVRNEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAETDLAPEIDGFNALLKALVGHNLGKLAMESYYLMKEVGCEPNKA
Subjt:  ELLRQNECSLALKVFEDVRNEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAETDLAPEIDGFNALLKALVGHNLGKLAMESYYLMKEVGCEPNKA

Query:  SFRIVIKGLELKGEAVDLRTVKQDAQKLYGESLEFLEEAEEGATAISIH
        SFRIVIKGLELKGEAVDLRTVKQDAQKLYGESLEFLEEAEEGATAISIH
Subjt:  SFRIVIKGLELKGEAVDLRTVKQDAQKLYGESLEFLEEAEEGATAISIH

A0A5D3CCT4 Pentatricopeptide repeat-containing protein8.1e-13299.6Show/hide
Query:  MSFLLTLPSPTILSPPLKLPSSVRKPCCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR
        MSFLLTLPSPTILSPPLKLPSSVRKPCCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR
Subjt:  MSFLLTLPSPTILSPPLKLPSSVRKPCCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR

Query:  ELLRQNECSLALKVFEDVRNEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAETDLAPEIDGFNALLKALVGHNLGKLAMESYYLMKEVGCEPNKA
        ELLRQNECSLALKVFEDVRNEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAETDLAPEIDGFNALLK LVGHNLGKLAMESYYLMKEVGCEPNKA
Subjt:  ELLRQNECSLALKVFEDVRNEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAETDLAPEIDGFNALLKALVGHNLGKLAMESYYLMKEVGCEPNKA

Query:  SFRIVIKGLELKGEAVDLRTVKQDAQKLYGESLEFLEEAEEGATAISIH
        SFRIVIKGLELKGEAVDLRTVKQDAQKLYGESLEFLEEAEEGATAISIH
Subjt:  SFRIVIKGLELKGEAVDLRTVKQDAQKLYGESLEFLEEAEEGATAISIH

A0A6J1HX85 protein THYLAKOID ASSEMBLY 8-like, chloroplastic6.5e-10583.13Show/hide
Query:  MSFLLTLPSPTILSPPLKLPSSVRKPCCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR
        MSFL T PS TILSPP  L  S  K   L+LGR EGY RVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKR KKDLQQLDRVYDSKIRRLLKFDM+AVLR
Subjt:  MSFLLTLPSPTILSPPLKLPSSVRKPCCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR

Query:  ELLRQNECSLALKVFEDVRNEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAETDLAPEIDGFNALLKALVGHNLGKLAMESYYLMKEVGCEPNKA
        ELLRQNECSLALKVFEDVR E WYKPQVSLYADI++VLASNGLFE+VQII SY+KAETDLAPEI+GFN LLKALV +NLG+LAMESYYLMKEVGCEP+KA
Subjt:  ELLRQNECSLALKVFEDVRNEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAETDLAPEIDGFNALLKALVGHNLGKLAMESYYLMKEVGCEPNKA

Query:  SFRIVIKGLELKGEAVDLRTVKQDAQKLYGESLEFLEEAEEGATAISIH
        SFRIVIKGLE   E+VDLR VK+DAQ+LYGESLEFLEE +E AT IS H
Subjt:  SFRIVIKGLELKGEAVDLRTVKQDAQKLYGESLEFLEEAEEGATAISIH

SwissProt top hitse value%identityAlignment
O82178 Pentatricopeptide repeat-containing protein At2g351302.7e-0726.89Show/hide
Query:  LALKVFEDVRNEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAETDLAPEIDGFNALLKALVGHNLGKLAMESYYLMKEVGCEPNKASFRIVIKGL
        ++ K++ ++R+ H  KP +  Y  ++   A  GL E+ + I   ++ E  L P++  +NAL+++         A E + LM+ +GCEP++AS+ I++   
Subjt:  LALKVFEDVRNEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAETDLAPEIDGFNALLKALVGHNLGKLAMESYYLMKEVGCEPNKASFRIVIKGL

Query:  ELKGEAVDLRTVKQDAQKL
           G   D   V ++ ++L
Subjt:  ELKGEAVDLRTVKQDAQKL

Q1PFH7 Pentatricopeptide repeat-containing protein At1g623501.9e-1634.21Show/hide
Query:  LSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRNEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAE
        +S E + A + LKR +    +LDR   S + RLLK D+++VL E  RQN+  L +K++E VR E WY+P +  Y D++ +LA N   +  + +   +K E
Subjt:  LSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRNEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAE

Query:  TDLAPEIDGFNALLKALVGHNLGKLAMESYYLMKEVGCEPNKASFRIVIKGL
          L  +   F  L++  + + L   AM  Y  M+E    P    FR+++KGL
Subjt:  TDLAPEIDGFNALLKALVGHNLGKLAMESYYLMKEVGCEPNKASFRIVIKGL

Q9LVW6 Protein THYLAKOID ASSEMBLY 8, chloroplastic1.4e-1636.72Show/hide
Query:  GGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRNEHWYKP-QVSLYADIITVLASNG
        G  +NR PL KGR LS EAIQ++QSLKR  +    L       +RRL+K D+++VLRELLRQ+ C+LA+ V   +R E  Y P  + LYADI+  L  N 
Subjt:  GGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRNEHWYKP-QVSLYADIITVLASNG

Query:  LFERVQIILSYMKAETDLAPEIDGFNALLKALVGHNLGKLAMESYYLMKEVG-----CEPNKASFRIVIKGLELKGE
         F+ +  ++  +    D   +      L++A+VG    +  +  Y LM+E G      E ++    ++ KGL   GE
Subjt:  LFERVQIILSYMKAETDLAPEIDGFNALLKALVGHNLGKLAMESYYLMKEVG-----CEPNKASFRIVIKGLELKGE

Q9SCP4 Pentatricopeptide repeat-containing protein At3g531701.8e-0625.5Show/hide
Query:  IEAIQAVQSLKRTKKDLQQLDRVYDS-KIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRNEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAET
        ++  + +  + RT   ++ ++R  +S K   L    +L  L E +++N    ALK+F  +R +HWY+P+   Y  +  VL +    ++  ++   M +E 
Subjt:  IEAIQAVQSLKRTKKDLQQLDRVYDS-KIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRNEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAET

Query:  DLAPEIDGFNALLKALVGHNLGKLAMESYYLMKEVG-CEPNKASFRIVI
         L P ID + +L+       L   A  +   MK V  C+P+  +F ++I
Subjt:  DLAPEIDGFNALLKALVGHNLGKLAMESYYLMKEVG-CEPNKASFRIVI

Q9STF9 Protein THYLAKOID ASSEMBLY 8-like, chloroplastic2.4e-1933.7Show/hide
Query:  RKPLQKGRNL-SIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRNEHWYKPQVSLYADIITVLASNGLFERV
        R PL +G+ L   EA+  +  LKR K+D ++LD+   + + RLLK DMLAV+ EL RQ E +LA+K+FE ++ + WY+P V +Y D+I  LA +   +  
Subjt:  RKPLQKGRNL-SIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRNEHWYKPQVSLYADIITVLASNGLFERV

Query:  QIILSYMKAETDLAPEIDGFNALLKALVGHNLGKLAMESYYLMKEVGCEPNKASFRIVIKGLELKGEAVDLRTVKQDAQKLYGE
          +   MK E +L P+   +  +++  +       AM  Y  M +    P +  FR+++KG  L    +    VK+D ++L+ E
Subjt:  QIILSYMKAETDLAPEIDGFNALLKALVGHNLGKLAMESYYLMKEVGCEPNKASFRIVIKGLELKGEAVDLRTVKQDAQKLYGE

Arabidopsis top hitse value%identityAlignment
AT1G62350.1 Pentatricopeptide repeat (PPR) superfamily protein1.3e-1734.21Show/hide
Query:  LSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRNEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAE
        +S E + A + LKR +    +LDR   S + RLLK D+++VL E  RQN+  L +K++E VR E WY+P +  Y D++ +LA N   +  + +   +K E
Subjt:  LSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRNEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAE

Query:  TDLAPEIDGFNALLKALVGHNLGKLAMESYYLMKEVGCEPNKASFRIVIKGL
          L  +   F  L++  + + L   AM  Y  M+E    P    FR+++KGL
Subjt:  TDLAPEIDGFNALLKALVGHNLGKLAMESYYLMKEVGCEPNKASFRIVIKGL

AT2G35130.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.9e-0826.89Show/hide
Query:  LALKVFEDVRNEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAETDLAPEIDGFNALLKALVGHNLGKLAMESYYLMKEVGCEPNKASFRIVIKGL
        ++ K++ ++R+ H  KP +  Y  ++   A  GL E+ + I   ++ E  L P++  +NAL+++         A E + LM+ +GCEP++AS+ I++   
Subjt:  LALKVFEDVRNEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAETDLAPEIDGFNALLKALVGHNLGKLAMESYYLMKEVGCEPNKASFRIVIKGL

Query:  ELKGEAVDLRTVKQDAQKL
           G   D   V ++ ++L
Subjt:  ELKGEAVDLRTVKQDAQKL

AT3G27750.1 FUNCTIONS IN: molecular_function unknown1.0e-1736.72Show/hide
Query:  GGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRNEHWYKP-QVSLYADIITVLASNG
        G  +NR PL KGR LS EAIQ++QSLKR  +    L       +RRL+K D+++VLRELLRQ+ C+LA+ V   +R E  Y P  + LYADI+  L  N 
Subjt:  GGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRNEHWYKP-QVSLYADIITVLASNG

Query:  LFERVQIILSYMKAETDLAPEIDGFNALLKALVGHNLGKLAMESYYLMKEVG-----CEPNKASFRIVIKGLELKGE
         F+ +  ++  +    D   +      L++A+VG    +  +  Y LM+E G      E ++    ++ KGL   GE
Subjt:  LFERVQIILSYMKAETDLAPEIDGFNALLKALVGHNLGKLAMESYYLMKEVG-----CEPNKASFRIVIKGLELKGE

AT3G46870.1 Pentatricopeptide repeat (PPR) superfamily protein1.7e-2033.7Show/hide
Query:  RKPLQKGRNL-SIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRNEHWYKPQVSLYADIITVLASNGLFERV
        R PL +G+ L   EA+  +  LKR K+D ++LD+   + + RLLK DMLAV+ EL RQ E +LA+K+FE ++ + WY+P V +Y D+I  LA +   +  
Subjt:  RKPLQKGRNL-SIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRNEHWYKPQVSLYADIITVLASNGLFERV

Query:  QIILSYMKAETDLAPEIDGFNALLKALVGHNLGKLAMESYYLMKEVGCEPNKASFRIVIKGLELKGEAVDLRTVKQDAQKLYGE
          +   MK E +L P+   +  +++  +       AM  Y  M +    P +  FR+++KG  L    +    VK+D ++L+ E
Subjt:  QIILSYMKAETDLAPEIDGFNALLKALVGHNLGKLAMESYYLMKEVGCEPNKASFRIVIKGLELKGEAVDLRTVKQDAQKLYGE

AT5G09320.1 Vacuolar sorting protein 9 (VPS9) domain1.2e-5854.91Show/hide
Query:  VTMRGGSENRKPLQKGRNLSIEAIQAVQSLKR---------------TKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRNEHWY
        + MR  S+NRKPLQ+GR LSIEAIQAVQ+LKR               T      LDRV  SK RRLLKFDM+AVLRELLRQNECSLALKVFE++R E+WY
Subjt:  VTMRGGSENRKPLQKGRNLSIEAIQAVQSLKR---------------TKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRNEHWY

Query:  KPQVSLYADIITVLASNGLFERVQIILSYMKAETDLAPEIDGFNALLKALVGHNLGKLAMESYYLMKEVGCEPNKASFRIVIKGLELKGEAVDLRTVKQD
        KPQV +Y D+ITV+A N L E V  + S MK+E  L  EI+ FN LL  L+ H L  L M+ Y  M+ +G EP++ASFR+++ GLE  GE      V+QD
Subjt:  KPQVSLYADIITVLASNGLFERVQIILSYMKAETDLAPEIDGFNALLKALVGHNLGKLAMESYYLMKEVGCEPNKASFRIVIKGLELKGEAVDLRTVKQD

Query:  AQKLYGESLEFLEEAEEGATAISI
        A + YGESLEF+EE EE ++  S+
Subjt:  AQKLYGESLEFLEEAEEGATAISI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTTCTTACTAACTCTTCCGTCCCCGACGATTCTCAGTCCTCCGCTCAAGTTACCAAGCTCTGTCCGAAAACCATGCTGCCTGCAGCTAGGTAGGGCGGAGGGATA
TCCGAGAGTGACAATGAGAGGCGGAAGTGAAAACCGGAAGCCACTGCAGAAGGGGAGGAACCTCAGCATCGAAGCAATTCAAGCGGTGCAATCGTTGAAGCGAACAAAGA
AAGATTTACAACAATTGGACCGAGTGTATGATTCCAAAATTAGGCGCTTATTGAAGTTTGATATGTTGGCTGTTCTTCGCGAGCTCCTTCGCCAGAACGAGTGTTCTTTG
GCTCTTAAGGTTTTCGAAGATGTTAGAAATGAACACTGGTACAAGCCTCAGGTCTCGCTGTATGCTGATATTATTACAGTATTGGCTAGCAATGGATTGTTCGAACGAGT
ACAAATTATTCTTTCGTACATGAAAGCAGAGACTGATTTAGCACCTGAAATTGACGGGTTTAACGCTCTTTTGAAGGCATTGGTTGGTCATAATTTAGGTAAACTGGCGA
TGGAGTCGTATTATTTGATGAAGGAAGTAGGTTGTGAGCCAAATAAGGCTTCTTTCAGGATTGTAATAAAAGGATTGGAATTAAAGGGAGAGGCAGTTGATTTAAGAACT
GTGAAACAGGATGCACAAAAGCTTTATGGTGAATCACTCGAGTTTTTGGAGGAAGCAGAAGAGGGAGCTACAGCCATATCTATACACTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTTCTTACTAACTCTTCCGTCCCCGACGATTCTCAGTCCTCCGCTCAAGTTACCAAGCTCTGTCCGAAAACCATGCTGCCTGCAGCTAGGTAGGGCGGAGGGATA
TCCGAGAGTGACAATGAGAGGCGGAAGTGAAAACCGGAAGCCACTGCAGAAGGGGAGGAACCTCAGCATCGAAGCAATTCAAGCGGTGCAATCGTTGAAGCGAACAAAGA
AAGATTTACAACAATTGGACCGAGTGTATGATTCCAAAATTAGGCGCTTATTGAAGTTTGATATGTTGGCTGTTCTTCGCGAGCTCCTTCGCCAGAACGAGTGTTCTTTG
GCTCTTAAGGTTTTCGAAGATGTTAGAAATGAACACTGGTACAAGCCTCAGGTCTCGCTGTATGCTGATATTATTACAGTATTGGCTAGCAATGGATTGTTCGAACGAGT
ACAAATTATTCTTTCGTACATGAAAGCAGAGACTGATTTAGCACCTGAAATTGACGGGTTTAACGCTCTTTTGAAGGCATTGGTTGGTCATAATTTAGGTAAACTGGCGA
TGGAGTCGTATTATTTGATGAAGGAAGTAGGTTGTGAGCCAAATAAGGCTTCTTTCAGGATTGTAATAAAAGGATTGGAATTAAAGGGAGAGGCAGTTGATTTAAGAACT
GTGAAACAGGATGCACAAAAGCTTTATGGTGAATCACTCGAGTTTTTGGAGGAAGCAGAAGAGGGAGCTACAGCCATATCTATACACTGA
Protein sequenceShow/hide protein sequence
MSFLLTLPSPTILSPPLKLPSSVRKPCCLQLGRAEGYPRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNECSL
ALKVFEDVRNEHWYKPQVSLYADIITVLASNGLFERVQIILSYMKAETDLAPEIDGFNALLKALVGHNLGKLAMESYYLMKEVGCEPNKASFRIVIKGLELKGEAVDLRT
VKQDAQKLYGESLEFLEEAEEGATAISIH