; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0000672 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0000672
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag-pro-like protein
Genome locationchr03:2896042..2896467
RNA-Seq ExpressionIVF0000672
SyntenyIVF0000672
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006310 - DNA recombination (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037620.1 Gag-pro-like protein [Cucumis melo var. makuwa]1.48e-7882.27Show/hide
Query:  MGKGKVVVDTTQSSNPIQDTDDSVYPLGFTSCHMNVPQSQTTQHYVATNPLYAVSPPVPCIEHLEAQAKIQHMGKNENTSTKQKLDVLEDRMRAIERTDV
        MGKGKV VDT QSSNPIQDTDD +YP GFT  HMNVPQSQTTQHY+ TNPLY V P VP +EHLEAQAKIQ MG+NENT  KQKLDVLE+R+RAIE TDV
Subjt:  MGKGKVVVDTTQSSNPIQDTDDSVYPLGFTSCHMNVPQSQTTQHYVATNPLYAVSPPVPCIEHLEAQAKIQHMGKNENTSTKQKLDVLEDRMRAIERTDV

Query:  YGNIDATQLCLVPGLIIPAKFKIPKFDKYDGSSCPMSHLIM
        YGNIDATQLCLVPGLIIPAKFK+P+FDKYDGS+CP SHLIM
Subjt:  YGNIDATQLCLVPGLIIPAKFKIPKFDKYDGSSCPMSHLIM

KAA0055069.1 RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H-like protein [Cucumis melo var. makuwa]1.80e-9699.29Show/hide
Query:  MGKGKVVVDTTQSSNPIQDTDDSVYPLGFTSCHMNVPQSQTTQHYVATNPLYAVSPPVPCIEHLEAQAKIQHMGKNENTSTKQKLDVLEDRMRAIERTDV
        MGKGKVVVDTTQSSNPIQDTDDSVYPLGFTSCHMNVPQSQTTQHYVATNPLYAVSPPVPCIEHLEAQAKIQHMGKNENTSTKQKLDVLEDRMRAIERTDV
Subjt:  MGKGKVVVDTTQSSNPIQDTDDSVYPLGFTSCHMNVPQSQTTQHYVATNPLYAVSPPVPCIEHLEAQAKIQHMGKNENTSTKQKLDVLEDRMRAIERTDV

Query:  YGNIDATQLCLVPGLIIPAKFKIPKFDKYDGSSCPMSHLIM
        YGNIDATQLCLVPGLIIPAKFKIPKFDKYDGSSCPMSHLI+
Subjt:  YGNIDATQLCLVPGLIIPAKFKIPKFDKYDGSSCPMSHLIM

KAA0058862.1 Gag-pro-like protein [Cucumis melo var. makuwa]4.43e-7580.14Show/hide
Query:  MGKGKVVVDTTQSSNPIQDTDDSVYPLGFTSCHMNVPQSQTTQHYVATNPLYAVSPPVPCIEHLEAQAKIQHMGKNENTSTKQKLDVLEDRMRAIERTDV
        MGKGKVVVDTTQSSNP+QDTDD +Y  GFT CHMNVPQSQTTQHYVATNP+Y V P VP IEHLEAQAKIQ MG+N+NT TKQKLDVLE+ ++AIE T+V
Subjt:  MGKGKVVVDTTQSSNPIQDTDDSVYPLGFTSCHMNVPQSQTTQHYVATNPLYAVSPPVPCIEHLEAQAKIQHMGKNENTSTKQKLDVLEDRMRAIERTDV

Query:  YGNIDATQLCLVPGLIIPAKFKIPKFDKYDGSSCPMSHLIM
        Y NID TQLCLV GLIIPAKFK+ +FDKYDGSSCP SHLIM
Subjt:  YGNIDATQLCLVPGLIIPAKFKIPKFDKYDGSSCPMSHLIM

TYK05098.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]3.11e-7783.69Show/hide
Query:  MGKGKVVVDTTQSSNPIQDTDDSVYPLGFTSCHMNVPQSQTTQHYVATNPLYAVSPPVPCIEHLEAQAKIQHMGKNENTSTKQKLDVLEDRMRAIERTDV
        MGKGKVVVDTTQSSNP+QDTDD +YP GFT CHMNVPQSQTTQHYVAT+PLY V P VP IEHLEAQ KIQ MG+NENT TKQ LDVLE+R+RAI+ TDV
Subjt:  MGKGKVVVDTTQSSNPIQDTDDSVYPLGFTSCHMNVPQSQTTQHYVATNPLYAVSPPVPCIEHLEAQAKIQHMGKNENTSTKQKLDVLEDRMRAIERTDV

Query:  YGNIDATQLCLVPGLIIPAKFKIPKFDKYDGSSCPMSHLIM
        Y NIDATQLCLVPGLIIP KFKIPKF KYDGSSCP SHLIM
Subjt:  YGNIDATQLCLVPGLIIPAKFKIPKFDKYDGSSCPMSHLIM

XP_008463191.1 PREDICTED: uncharacterized protein LOC103501400 [Cucumis melo]3.71e-7680.14Show/hide
Query:  MGKGKVVVDTTQSSNPIQDTDDSVYPLGFTSCHMNVPQSQTTQHYVATNPLYAVSPPVPCIEHLEAQAKIQHMGKNENTSTKQKLDVLEDRMRAIERTDV
        MGKGKV VDT Q SNPIQDTDD +YP GFT  HMNVPQSQTTQHY+ TNPLY V P VP +EHLEAQAKIQ MG+N+NT  KQKLD+LE+R+RAIE TDV
Subjt:  MGKGKVVVDTTQSSNPIQDTDDSVYPLGFTSCHMNVPQSQTTQHYVATNPLYAVSPPVPCIEHLEAQAKIQHMGKNENTSTKQKLDVLEDRMRAIERTDV

Query:  YGNIDATQLCLVPGLIIPAKFKIPKFDKYDGSSCPMSHLIM
        YGNIDATQLCLVPGLIIPAKFK+P+FDKYDGS+CP SHLIM
Subjt:  YGNIDATQLCLVPGLIIPAKFKIPKFDKYDGSSCPMSHLIM

TrEMBL top hitse value%identityAlignment
A0A5A7T2M2 Gag-pro-like protein3.3e-6182.27Show/hide
Query:  MGKGKVVVDTTQSSNPIQDTDDSVYPLGFTSCHMNVPQSQTTQHYVATNPLYAVSPPVPCIEHLEAQAKIQHMGKNENTSTKQKLDVLEDRMRAIERTDV
        MGKGKV VDT QSSNPIQDTDD +YP GFT  HMNVPQSQTTQHY+ TNPLY V P VP +EHLEAQAKIQ MG+NENT  KQKLDVLE+R+RAIE TDV
Subjt:  MGKGKVVVDTTQSSNPIQDTDDSVYPLGFTSCHMNVPQSQTTQHYVATNPLYAVSPPVPCIEHLEAQAKIQHMGKNENTSTKQKLDVLEDRMRAIERTDV

Query:  YGNIDATQLCLVPGLIIPAKFKIPKFDKYDGSSCPMSHLIM
        YGNIDATQLCLVPGLIIPAKFK+P+FDKYDGS+CP SHLIM
Subjt:  YGNIDATQLCLVPGLIIPAKFKIPKFDKYDGSSCPMSHLIM

A0A5A7U8Q2 CACTA en-spm transposon protein1.2e-6082.98Show/hide
Query:  MGKGKVVVDTTQSSNPIQDTDDSVYPLGFTSCHMNVPQSQTTQHYVATNPLYAVSPPVPCIEHLEAQAKIQHMGKNENTSTKQKLDVLEDRMRAIERTDV
        MGKGKVVVDTTQSSN +QDTDD +YP GFT CHMNVPQSQTTQHYVAT+PLY V P VP IEHLEAQ KIQ MG+NENT TKQ LDVLE+R+RAI+ TDV
Subjt:  MGKGKVVVDTTQSSNPIQDTDDSVYPLGFTSCHMNVPQSQTTQHYVATNPLYAVSPPVPCIEHLEAQAKIQHMGKNENTSTKQKLDVLEDRMRAIERTDV

Query:  YGNIDATQLCLVPGLIIPAKFKIPKFDKYDGSSCPMSHLIM
        Y NIDATQLCLVPGLIIP KFKIPKF KYDGSSCP SHLIM
Subjt:  YGNIDATQLCLVPGLIIPAKFKIPKFDKYDGSSCPMSHLIM

A0A5D3C1F9 CACTA en-spm transposon protein1.5e-6183.69Show/hide
Query:  MGKGKVVVDTTQSSNPIQDTDDSVYPLGFTSCHMNVPQSQTTQHYVATNPLYAVSPPVPCIEHLEAQAKIQHMGKNENTSTKQKLDVLEDRMRAIERTDV
        MGKGKVVVDTTQSSNP+QDTDD +YP GFT CHMNVPQSQTTQHYVAT+PLY V P VP IEHLEAQ KIQ MG+NENT TKQ LDVLE+R+RAI+ TDV
Subjt:  MGKGKVVVDTTQSSNPIQDTDDSVYPLGFTSCHMNVPQSQTTQHYVATNPLYAVSPPVPCIEHLEAQAKIQHMGKNENTSTKQKLDVLEDRMRAIERTDV

Query:  YGNIDATQLCLVPGLIIPAKFKIPKFDKYDGSSCPMSHLIM
        Y NIDATQLCLVPGLIIP KFKIPKF KYDGSSCP SHLIM
Subjt:  YGNIDATQLCLVPGLIIPAKFKIPKFDKYDGSSCPMSHLIM

A0A5D3CXD6 Retrotrans_gag domain-containing protein1.2e-6082.98Show/hide
Query:  MGKGKVVVDTTQSSNPIQDTDDSVYPLGFTSCHMNVPQSQTTQHYVATNPLYAVSPPVPCIEHLEAQAKIQHMGKNENTSTKQKLDVLEDRMRAIERTDV
        MGKGKV VDT QSSNPIQDTDD +YP GFT  HMNVPQSQTTQHYV TNPLY V P VP IEHLEAQAKIQ MG+NENT  KQKLDVLE+R+RAIE TDV
Subjt:  MGKGKVVVDTTQSSNPIQDTDDSVYPLGFTSCHMNVPQSQTTQHYVATNPLYAVSPPVPCIEHLEAQAKIQHMGKNENTSTKQKLDVLEDRMRAIERTDV

Query:  YGNIDATQLCLVPGLIIPAKFKIPKFDKYDGSSCPMSHLIM
        YGNIDATQLCLVP LIIPAKFK+P+FDKYDGS+CP SHLIM
Subjt:  YGNIDATQLCLVPGLIIPAKFKIPKFDKYDGSSCPMSHLIM

A0A5D3DLA4 RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H-like protein1.8e-7599.29Show/hide
Query:  MGKGKVVVDTTQSSNPIQDTDDSVYPLGFTSCHMNVPQSQTTQHYVATNPLYAVSPPVPCIEHLEAQAKIQHMGKNENTSTKQKLDVLEDRMRAIERTDV
        MGKGKVVVDTTQSSNPIQDTDDSVYPLGFTSCHMNVPQSQTTQHYVATNPLYAVSPPVPCIEHLEAQAKIQHMGKNENTSTKQKLDVLEDRMRAIERTDV
Subjt:  MGKGKVVVDTTQSSNPIQDTDDSVYPLGFTSCHMNVPQSQTTQHYVATNPLYAVSPPVPCIEHLEAQAKIQHMGKNENTSTKQKLDVLEDRMRAIERTDV

Query:  YGNIDATQLCLVPGLIIPAKFKIPKFDKYDGSSCPMSHLIM
        YGNIDATQLCLVPGLIIPAKFKIPKFDKYDGSSCPMSHLI+
Subjt:  YGNIDATQLCLVPGLIIPAKFKIPKFDKYDGSSCPMSHLIM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAAAGGAAAAGTCGTTGTAGATACAACACAATCAAGCAATCCAATTCAAGACACTGATGATTCTGTTTATCCTCTAGGATTCACTTCATGCCACATGAATGTTCC
GCAGTCTCAAACCACTCAACACTATGTTGCTACAAATCCGTTGTATGCAGTTTCACCTCCTGTCCCATGTATAGAACATTTGGAAGCTCAAGCTAAAATTCAACACATGG
GAAAAAATGAGAACACTTCGACTAAGCAAAAACTAGATGTTTTGGAAGACAGGATGCGAGCAATTGAAAGGACTGATGTCTATGGAAATATAGATGCAACACAATTGTGC
TTGGTGCCAGGCTTGATCATTCCAGCAAAGTTTAAAATTCCTAAATTCGATAAATATGATGGATCATCGTGTCCAATGAGTCATCTTATAATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGAAAGGAAAAGTCGTTGTAGATACAACACAATCAAGCAATCCAATTCAAGACACTGATGATTCTGTTTATCCTCTAGGATTCACTTCATGCCACATGAATGTTCC
GCAGTCTCAAACCACTCAACACTATGTTGCTACAAATCCGTTGTATGCAGTTTCACCTCCTGTCCCATGTATAGAACATTTGGAAGCTCAAGCTAAAATTCAACACATGG
GAAAAAATGAGAACACTTCGACTAAGCAAAAACTAGATGTTTTGGAAGACAGGATGCGAGCAATTGAAAGGACTGATGTCTATGGAAATATAGATGCAACACAATTGTGC
TTGGTGCCAGGCTTGATCATTCCAGCAAAGTTTAAAATTCCTAAATTCGATAAATATGATGGATCATCGTGTCCAATGAGTCATCTTATAATGTAA
Protein sequenceShow/hide protein sequence
MGKGKVVVDTTQSSNPIQDTDDSVYPLGFTSCHMNVPQSQTTQHYVATNPLYAVSPPVPCIEHLEAQAKIQHMGKNENTSTKQKLDVLEDRMRAIERTDVYGNIDATQLC
LVPGLIIPAKFKIPKFDKYDGSSCPMSHLIM