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IVF0000680 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0000680
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationtig00000656:602846..603013
RNA-Seq ExpressionIVF0000680
SyntenyIVF0000680
Gene Ontology termsGO:0016788 - hydrolase activity, acting on ester bonds (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041029.1 retrotransposon protein [Cucumis melo var. makuwa]2.80e-2480Show/hide
Query:  MTYYDDVHDVDKGDSAYATTIASEDIHYIETTNEWSQWCDELAESMFIDWQLRNA
        MTY DDV D D+GDS YATT ASEDI YIETTNEWSQWCD+LA SMF DWQ RNA
Subjt:  MTYYDDVHDVDKGDSAYATTIASEDIHYIETTNEWSQWCDELAESMFIDWQLRNA

KAA0054051.1 retrotransposon protein [Cucumis melo var. makuwa]1.72e-2787.27Show/hide
Query:  MTYYDDVHDVDKGDSAYATTIASEDIHYIETTNEWSQWCDELAESMFIDWQLRNA
        MTY DD+ DVD+GDSAYATT ASEDIHYIETTNEWSQW DELAESMF DWQLRNA
Subjt:  MTYYDDVHDVDKGDSAYATTIASEDIHYIETTNEWSQWCDELAESMFIDWQLRNA

TYK19044.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]4.21e-2485.45Show/hide
Query:  MTYYDDVHDVDKGDSAYATTIASEDIHYIETTNEWSQWCDELAESMFIDWQLRNA
        MTY DDV+DVD+GDSAYATT ASEDIHYIET NEWSQW DELAESMF DW+LRNA
Subjt:  MTYYDDVHDVDKGDSAYATTIASEDIHYIETTNEWSQWCDELAESMFIDWQLRNA

XP_016899482.1 PREDICTED: uncharacterized protein LOC107990543 [Cucumis melo]6.52e-2585.45Show/hide
Query:  MTYYDDVHDVDKGDSAYATTIASEDIHYIETTNEWSQWCDELAESMFIDWQLRNA
        MTY DDV+DVD+GDSAYATT ASEDIHYIET NEWSQW DELAESMF DW+LRNA
Subjt:  MTYYDDVHDVDKGDSAYATTIASEDIHYIETTNEWSQWCDELAESMFIDWQLRNA

XP_016901894.1 PREDICTED: uncharacterized protein LOC107991461 [Cucumis melo]1.78e-2787.27Show/hide
Query:  MTYYDDVHDVDKGDSAYATTIASEDIHYIETTNEWSQWCDELAESMFIDWQLRNA
        M YYDDV DVD+GDSAYA T A+EDIHYIETTNEWSQWCDELAESMFIDWQLRN 
Subjt:  MTYYDDVHDVDKGDSAYATTIASEDIHYIETTNEWSQWCDELAESMFIDWQLRNA

TrEMBL top hitse value%identityAlignment
A0A1S4E0Z9 uncharacterized protein LOC1079914613.2e-2088.89Show/hide
Query:  MTYYDDVHDVDKGDSAYATTIASEDIHYIETTNEWSQWCDELAESMFIDWQLRN
        M YYDDV DVD+GDSAYA T A+EDIHYIETTNEWSQWCDELAESMFIDWQLRN
Subjt:  MTYYDDVHDVDKGDSAYATTIASEDIHYIETTNEWSQWCDELAESMFIDWQLRN

A0A5A7SNH9 Putative nuclease HARBI11.0e-1885.45Show/hide
Query:  MTYYDDVHDVDKGDSAYATTIASEDIHYIETTNEWSQWCDELAESMFIDWQLRNA
        MTY DDV+DVD+GDSAYATT ASEDIHYIET NEWSQW DELAESMF DW+LRNA
Subjt:  MTYYDDVHDVDKGDSAYATTIASEDIHYIETTNEWSQWCDELAESMFIDWQLRNA

A0A5A7TW41 Retrotransposon protein7.8e-1987.27Show/hide
Query:  MTYYDDVHDVDKGDSAYATTIASEDIHYIETTNEWSQWCDELAESMFIDWQLRNA
        MTY  DV DVD+GDS YATTIASEDIHYIETTNEWSQW DELAESMF DWQLRNA
Subjt:  MTYYDDVHDVDKGDSAYATTIASEDIHYIETTNEWSQWCDELAESMFIDWQLRNA

A0A5D3BDZ0 Retrotransposon protein2.1e-1987.27Show/hide
Query:  MTYYDDVHDVDKGDSAYATTIASEDIHYIETTNEWSQWCDELAESMFIDWQLRNA
        MTY DD+ DVD+GDSAYATT ASEDIHYIETTNEWSQW DELAESMF DWQLRNA
Subjt:  MTYYDDVHDVDKGDSAYATTIASEDIHYIETTNEWSQWCDELAESMFIDWQLRNA

A0A5D3CUG9 Retrotransposon protein7.8e-1987.27Show/hide
Query:  MTYYDDVHDVDKGDSAYATTIASEDIHYIETTNEWSQWCDELAESMFIDWQLRNA
        MTY  DV DVD+GDS YATTIASEDIHYIETTNEWSQW DELAESMF DWQLRNA
Subjt:  MTYYDDVHDVDKGDSAYATTIASEDIHYIETTNEWSQWCDELAESMFIDWQLRNA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATATTACGACGACGTTCACGATGTGGACAAGGGGGACTCCGCATACGCGACAACCATCGCTTCAGAAGACATTCACTACATTGAGACGACAAACGAGTGGTCTCA
GTGGTGTGACGAACTAGCTGAATCAATGTTCATAGATTGGCAGTTGCGTAACGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACATATTACGACGACGTTCACGATGTGGACAAGGGGGACTCCGCATACGCGACAACCATCGCTTCAGAAGACATTCACTACATTGAGACGACAAACGAGTGGTCTCA
GTGGTGTGACGAACTAGCTGAATCAATGTTCATAGATTGGCAGTTGCGTAACGCTTAG
Protein sequenceShow/hide protein sequence
MTYYDDVHDVDKGDSAYATTIASEDIHYIETTNEWSQWCDELAESMFIDWQLRNA