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IVF0000741 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0000741
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGibberellin-regulated protein 2
Genome locationchr03:25142033..25142804
RNA-Seq ExpressionIVF0000741
SyntenyIVF0000741
Gene Ontology termsNA
InterPro domainsIPR003854 - Gibberellin regulated protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008444802.1 PREDICTED: snakin-2-like [Cucumis melo]3.44e-66100Show/hide
Query:  MSILTKALFASLLLSLLFLHFVESSGVGLLPRSPQKMDCRGACTRRCSLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP
        MSILTKALFASLLLSLLFLHFVESSGVGLLPRSPQKMDCRGACTRRCSLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP
Subjt:  MSILTKALFASLLLSLLFLHFVESSGVGLLPRSPQKMDCRGACTRRCSLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP

XP_023002563.1 snakin-2-like [Cucurbita maxima]2.17e-5180.41Show/hide
Query:  MSILTKALFASLLLSLLFLHFVESSGVGLLPRSPQKMDCRGACTRRCSLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP
        M+I +KAL ASLLLSLLFLH VES G  ++  SPQKMDC GAC  RC LSSRPRLC+RACGTCCQRCNCVPPGTSGNHHLCPCYA++TTHGGRLKCP
Subjt:  MSILTKALFASLLLSLLFLHFVESSGVGLLPRSPQKMDCRGACTRRCSLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP

XP_031736573.1 snakin-2 [Cucumis sativus]5.30e-6191.75Show/hide
Query:  MSILTKALFASLLLSLLFLHFVESSGVGLLPRSPQKMDCRGACTRRCSLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP
        M ILTK LFASLLLSLLFLHFVES+GVGLLP +P++MDCRGACTRRC+LSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP
Subjt:  MSILTKALFASLLLSLLFLHFVESSGVGLLPRSPQKMDCRGACTRRCSLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP

XP_038886088.1 snakin-2-like isoform X1 [Benincasa hispida]2.80e-5282.83Show/hide
Query:  MSILTKALFASLLLSLLFLHFV--ESSGVGLLPRSPQKMDCRGACTRRCSLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP
        MS  +KAL ASL LSLLFLH V  ES+GVGL+P SPQKMDC GAC  RC LSSR RLCNRACGTCC+RCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP
Subjt:  MSILTKALFASLLLSLLFLHFV--ESSGVGLLPRSPQKMDCRGACTRRCSLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP

XP_038886089.1 snakin-2-like isoform X2 [Benincasa hispida]2.74e-5484.54Show/hide
Query:  MSILTKALFASLLLSLLFLHFVESSGVGLLPRSPQKMDCRGACTRRCSLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP
        MS  +KAL ASL LSLLFLH VES+GVGL+P SPQKMDC GAC  RC LSSR RLCNRACGTCC+RCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP
Subjt:  MSILTKALFASLLLSLLFLHFVESSGVGLLPRSPQKMDCRGACTRRCSLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP

TrEMBL top hitse value%identityAlignment
A0A0A0LNS5 Uncharacterized protein2.9e-4591.75Show/hide
Query:  MSILTKALFASLLLSLLFLHFVESSGVGLLPRSPQKMDCRGACTRRCSLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP
        M ILTK LFASLLLSLLFLHFVES+GVGLLP +P++MDCRGACTRRC+LSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP
Subjt:  MSILTKALFASLLLSLLFLHFVESSGVGLLPRSPQKMDCRGACTRRCSLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP

A0A1S3BBY7 snakin-2-like3.4e-49100Show/hide
Query:  MSILTKALFASLLLSLLFLHFVESSGVGLLPRSPQKMDCRGACTRRCSLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP
        MSILTKALFASLLLSLLFLHFVESSGVGLLPRSPQKMDCRGACTRRCSLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP
Subjt:  MSILTKALFASLLLSLLFLHFVESSGVGLLPRSPQKMDCRGACTRRCSLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP

A0A6J1CRW3 snakin-2-like3.2e-3168.81Show/hide
Query:  MSILTKALFAS--LLLSLLFLHF---------VES-SGVGLLPRSPQKMDCRGACTRRCSLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMT
        MS+ +K L  +  LL SLLFLH          VES    G+ P +P KMDC GAC  RC LSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMT
Subjt:  MSILTKALFAS--LLLSLLFLHF---------VES-SGVGLLPRSPQKMDCRGACTRRCSLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMT

Query:  THGGRLKCP
        THGGR KCP
Subjt:  THGGRLKCP

A0A6J1GJ50 snakin-2-like1.0e-3779.38Show/hide
Query:  MSILTKALFASLLLSLLFLHFVESSGVGLLPRSPQKMDCRGACTRRCSLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP
        M+I +KAL ASLLLSLLFLH VES G  ++  SPQKMDC GAC  RC LSSRPRLC+RACGTCCQRCNCVPPGTSGNHH+CPCYA++TTHGGRLKCP
Subjt:  MSILTKALFASLLLSLLFLHFVESSGVGLLPRSPQKMDCRGACTRRCSLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP

A0A6J1KTY1 snakin-2-like5.9e-3880.41Show/hide
Query:  MSILTKALFASLLLSLLFLHFVESSGVGLLPRSPQKMDCRGACTRRCSLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP
        M+I +KAL ASLLLSLLFLH VES G  ++  SPQKMDC GAC  RC LSSRPRLC+RACGTCCQRCNCVPPGTSGNHHLCPCYA++TTHGGRLKCP
Subjt:  MSILTKALFASLLLSLLFLHFVESSGVGLLPRSPQKMDCRGACTRRCSLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP

SwissProt top hitse value%identityAlignment
F4IQJ4 Gibberellin-regulated protein 113.9e-2661.96Show/hide
Query:  KALFASLLLSLLFLHFVESSGVGLLPRSPQKMDCRGACTRRCSLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP
        + L ASLL+SLL L FV +  V        K+DC   C  RCSLSSRP LC+RACGTCC RCNCV PGTSGN+  CPCY ++TTHGGR KCP
Subjt:  KALFASLLLSLLFLHFVESSGVGLLPRSPQKMDCRGACTRRCSLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP

P46687 Gibberellin-regulated protein 39.5e-2558.42Show/hide
Query:  ALFASLLLSLLFL----------HFVESSGVGLLPRSPQKMDCRGACTRRCSLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKC
        A+F S L+ LL L          H  E S VG       K+DC G C  RCS SSRP LC RAC +CC RCNCVPPGT+GNHHLCPCYA++TT GGRLKC
Subjt:  ALFASLLLSLLFL----------HFVESSGVGLLPRSPQKMDCRGACTRRCSLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKC

Query:  P
        P
Subjt:  P

P46688 Gibberellin-regulated protein 23.1e-2355.45Show/hide
Query:  ALFASLLLSLLFL----------HFVESSGVGLLPRSPQKMDCRGACTRRCSLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKC
        A+F S L+ LL +          H  + + VG       K+DC G C  RCS SSR +LC RAC +CC RCNCVPPGTSGN HLCPCYA++TTHGGRLKC
Subjt:  ALFASLLLSLLFL----------HFVESSGVGLLPRSPQKMDCRGACTRRCSLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKC

Query:  P
        P
Subjt:  P

P46689 Gibberellin-regulated protein 18.6e-2659.38Show/hide
Query:  LTKALFASLLLSLLFLHFVESSGVGLLPRS--PQKMDCRGACTRRCSLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP
        ++KAL ASLL+SLL L  V++       ++   +K+DC  AC  RC LS RPRLC+RACGTCC RCNCVPPGT GN+  C CYA++TTHGGR KCP
Subjt:  LTKALFASLLLSLLFLHFVESSGVGLLPRS--PQKMDCRGACTRRCSLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP

Q93X17 Snakin-24.9e-2962.75Show/hide
Query:  LTKALFASLLLSLLFLHFVE--------SSGVGLLPRSPQKMDCRGACTRRCSLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLK
        ++KALFASLLLSLL L  V+        S+ +     S +K+DC GAC  RC LSSRPRLCNRACGTCC RCNCVPPGTSGN   CPCYA++TTHG + K
Subjt:  LTKALFASLLLSLLFLHFVE--------SSGVGLLPRSPQKMDCRGACTRRCSLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLK

Query:  CP
        CP
Subjt:  CP

Arabidopsis top hitse value%identityAlignment
AT1G75750.1 GAST1 protein homolog 16.1e-2759.38Show/hide
Query:  LTKALFASLLLSLLFLHFVESSGVGLLPRS--PQKMDCRGACTRRCSLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP
        ++KAL ASLL+SLL L  V++       ++   +K+DC  AC  RC LS RPRLC+RACGTCC RCNCVPPGT GN+  C CYA++TTHGGR KCP
Subjt:  LTKALFASLLLSLLFLHFVESSGVGLLPRS--PQKMDCRGACTRRCSLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP

AT1G75750.2 GAST1 protein homolog 11.0e-2660Show/hide
Query:  LTKALFASLLLSLLFLHFVESSGVGLLPRS-PQKMDCRGACTRRCSLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP
        ++KAL ASLL+SLL L  V++           +K+DC  AC  RC LS RPRLC+RACGTCC RCNCVPPGT GN+  C CYA++TTHGGR KCP
Subjt:  LTKALFASLLLSLLFLHFVESSGVGLLPRS-PQKMDCRGACTRRCSLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP

AT2G18420.1 Gibberellin-regulated family protein2.7e-2761.96Show/hide
Query:  KALFASLLLSLLFLHFVESSGVGLLPRSPQKMDCRGACTRRCSLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP
        + L ASLL+SLL L FV +  V        K+DC   C  RCSLSSRP LC+RACGTCC RCNCV PGTSGN+  CPCY ++TTHGGR KCP
Subjt:  KALFASLLLSLLFLHFVESSGVGLLPRSPQKMDCRGACTRRCSLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP

AT4G09600.1 GAST1 protein homolog 36.7e-2658.42Show/hide
Query:  ALFASLLLSLLFL----------HFVESSGVGLLPRSPQKMDCRGACTRRCSLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKC
        A+F S L+ LL L          H  E S VG       K+DC G C  RCS SSRP LC RAC +CC RCNCVPPGT+GNHHLCPCYA++TT GGRLKC
Subjt:  ALFASLLLSLLFL----------HFVESSGVGLLPRSPQKMDCRGACTRRCSLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKC

Query:  P
        P
Subjt:  P

AT4G09610.1 GAST1 protein homolog 22.2e-2455.45Show/hide
Query:  ALFASLLLSLLFL----------HFVESSGVGLLPRSPQKMDCRGACTRRCSLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKC
        A+F S L+ LL +          H  + + VG       K+DC G C  RCS SSR +LC RAC +CC RCNCVPPGTSGN HLCPCYA++TTHGGRLKC
Subjt:  ALFASLLLSLLFL----------HFVESSGVGLLPRSPQKMDCRGACTRRCSLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKC

Query:  P
        P
Subjt:  P


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCATCCTCACCAAAGCTCTCTTTGCTTCCCTCCTCCTCTCTCTCCTCTTCCTCCACTTTGTGGAATCCAGCGGCGTGGGTTTACTCCCTCGAAGTCCTCAGAAAAT
GGATTGCCGCGGCGCTTGTACGAGAAGGTGCAGCTTGTCGTCGAGGCCGAGGCTGTGCAATAGAGCGTGTGGGACGTGCTGTCAGCGCTGCAACTGCGTTCCGCCAGGGA
CTTCCGGCAACCACCATCTCTGCCCTTGCTACGCCGCCATGACCACCCACGGCGGCCGCCTCAAGTGCCCTTGA
mRNA sequenceShow/hide mRNA sequence
CAGAGCTTAGCTTTTTTTGCTATAAAACCAACCCTTTCTATCACTGATTTCTCCAAAATATTATCCACTCCAATTCAAGAATCCCCTAGAAAACCATGTCCATCCTCACC
AAAGCTCTCTTTGCTTCCCTCCTCCTCTCTCTCCTCTTCCTCCACTTTGTGGAATCCAGCGGCGTGGGTTTACTCCCTCGAAGTCCTCAGAAAATGGATTGCCGCGGCGC
TTGTACGAGAAGGTGCAGCTTGTCGTCGAGGCCGAGGCTGTGCAATAGAGCGTGTGGGACGTGCTGTCAGCGCTGCAACTGCGTTCCGCCAGGGACTTCCGGCAACCACC
ATCTCTGCCCTTGCTACGCCGCCATGACCACCCACGGCGGCCGCCTCAAGTGCCCTTGAATTGACCCGTTGACCGCCTCAACTTCTTGTGTATGTGTGTATACATGCATA
AATAATCATGAACCTATAAACAGTACTGTGTTTTGTTTATAGAAATGGATTATGGATGTAAACTTTTATGGTGTTTTTTTTTTTTTTTTTTCTTATGCCCATATTATGTA
TAAAACTAATTTGCTATCTTGGTTTCTTTCCTTTTTATTATTTATGTATTTTTT
Protein sequenceShow/hide protein sequence
MSILTKALFASLLLSLLFLHFVESSGVGLLPRSPQKMDCRGACTRRCSLSSRPRLCNRACGTCCQRCNCVPPGTSGNHHLCPCYAAMTTHGGRLKCP