CuGenDBv2

Gene ID	IVF0000760
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	TraB domain-containing protein
Genome location	tig00002870:12751..13143
RNA-Seq Expression	IVF0000760
Synteny	IVF0000760
Gene Ontology terms	NA
InterPro domains	IPR002816 - TraB/PrgY/GumN family

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0033611.1 traB domain-containing protein [Cucumis melo var. makuwa]

1.66e-84

99.23

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Query:  MEVLKFAAIPIFRSYPLSFATKFLKPINVSIKPPPSDFDFRSEISKDSRAAIAETHPELLDLADDGILVLVDKTKFGPVPAWRAEFVEPQAIWLVGTSHI
        MEVLKFAAIPIFRSYPLSFATKFLKPINVSIKPPPSDFDFRSEIS+DSRAAIAETHPELLDLADDGILVLVDKTKFGPVPAWRAEFVEPQAIWLVGTSHI
Subjt:  MEVLKFAAIPIFRSYPLSFATKFLKPINVSIKPPPSDFDFRSEISKDSRAAIAETHPELLDLADDGILVLVDKTKFGPVPAWRAEFVEPQAIWLVGTSHI

Query:  SSKSVKDVERVVRAVKPDNVVVELCRSRQV
        SSKSVKDVERVVRAVKPDNVVVELCRSRQV
Subjt:  SSKSVKDVERVVRAVKPDNVVVELCRSRQV

TYK22277.1 traB domain-containing protein [Cucumis melo var. makuwa]

1.17e-84

99.23

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Query:  MEVLKFAAIPIFRSYPLSFATKFLKPINVSIKPPPSDFDFRSEISKDSRAAIAETHPELLDLADDGILVLVDKTKFGPVPAWRAEFVEPQAIWLVGTSHI
        MEVLKFAAIPIFRSYPLSFATKFLKPINVSIKPPPSDFDFRSEISKDSRAAIAETHPELLDLADDGILVLVDKTKFGPVPAWRAEFVEPQAIWLVGTSHI
Subjt:  MEVLKFAAIPIFRSYPLSFATKFLKPINVSIKPPPSDFDFRSEISKDSRAAIAETHPELLDLADDGILVLVDKTKFGPVPAWRAEFVEPQAIWLVGTSHI

Query:  SSKSVKDVERVVRAVKPDNVVVELCRSRQV
        SSKSVKDV+RVVRAVKPDNVVVELCRSRQV
Subjt:  SSKSVKDVERVVRAVKPDNVVVELCRSRQV

XP_004140793.1 traB domain-containing protein isoform X1 [Cucumis sativus]

1.79e-70

90.62

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Query:  MEVLKFAAIPIFRSYPLSFATKFLKPINVSIKPPPSDFDFRSEISKDSRAAIAETHPELLDLADDGILVLVDKTKFGPVPAWRAEFVEPQAIWLVGTSHI
        ME LK  AIPIF+S PLSF TK LKPINVSI PPPSDFDFR EIS+DSRA IAETHPELLDLADDGILVLVDKTKFGPVPAWRAEFVEPQAIWLVGTSHI
Subjt:  MEVLKFAAIPIFRSYPLSFATKFLKPINVSIKPPPSDFDFRSEISKDSRAAIAETHPELLDLADDGILVLVDKTKFGPVPAWRAEFVEPQAIWLVGTSHI

Query:  SSKSVKDVERVVRAVKPDNVVVELCRSR
        S KSVKDVERVVRAVKPDNVVVELCRSR
Subjt:  SSKSVKDVERVVRAVKPDNVVVELCRSR

XP_008439166.1 PREDICTED: traB domain-containing protein [Cucumis melo]

8.55e-80

99.22

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Query:  MEVLKFAAIPIFRSYPLSFATKFLKPINVSIKPPPSDFDFRSEISKDSRAAIAETHPELLDLADDGILVLVDKTKFGPVPAWRAEFVEPQAIWLVGTSHI
        MEVLKFAAIPIFRSYPLSFATKFLKPINVSIKPPPSDFDFRSEIS+DSRAAIAETHPELLDLADDGILVLVDKTKFGPVPAWRAEFVEPQAIWLVGTSHI
Subjt:  MEVLKFAAIPIFRSYPLSFATKFLKPINVSIKPPPSDFDFRSEISKDSRAAIAETHPELLDLADDGILVLVDKTKFGPVPAWRAEFVEPQAIWLVGTSHI

Query:  SSKSVKDVERVVRAVKPDNVVVELCRSR
        SSKSVKDVERVVRAVKPDNVVVELCRSR
Subjt:  SSKSVKDVERVVRAVKPDNVVVELCRSR

XP_038876495.1 traB domain-containing protein isoform X3 [Benincasa hispida]

1.57e-69

90.62

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Query:  MEVLKFAAIPIFRSYPLSFATKFLKPINVSIKPPPSDFDFRSEISKDSRAAIAETHPELLDLADDGILVLVDKTKFGPVPAWRAEFVEPQAIWLVGTSHI
        ME LK  AIPIFRS PLSFATK LKPINVSIKPPPSDFDFRSEIS  SRAAIAE HPELLDLADDG LVLVDKT+FGPVPAWRAEFVEPQAIWLVGTSHI
Subjt:  MEVLKFAAIPIFRSYPLSFATKFLKPINVSIKPPPSDFDFRSEISKDSRAAIAETHPELLDLADDGILVLVDKTKFGPVPAWRAEFVEPQAIWLVGTSHI

Query:  SSKSVKDVERVVRAVKPDNVVVELCRSR
        S KSVKDVERVVR VKPDNVVVELCRSR
Subjt:  SSKSVKDVERVVRAVKPDNVVVELCRSR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L8K8 Uncharacterized protein

5.3e-58

90.77

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Query:  MEVLKFAAIPIFRSYPLSFATKFLKPINVSIKPPPSDFDFRSEISKDSRAAIAETHPELLDLADDGILVLVDKTKFGPVPAWRAEFVEPQAIWLVGTSHI
        ME LK  AIPIF+S PLSF TK LKPINVSI PPPSDFDFR EIS+DSRA IAETHPELLDLADDGILVLVDKTKFGPVPAWRAEFVEPQAIWLVGTSHI
Subjt:  MEVLKFAAIPIFRSYPLSFATKFLKPINVSIKPPPSDFDFRSEISKDSRAAIAETHPELLDLADDGILVLVDKTKFGPVPAWRAEFVEPQAIWLVGTSHI

Query:  SSKSVKDVERVVRAVKPDNVVVELCRSRQV
        S KSVKDVERVVRAVKPDNVVVELCRSRQV
Subjt:  SSKSVKDVERVVRAVKPDNVVVELCRSRQV

A0A1S3AXQ2 traB domain-containing protein

5.0e-64

99.22

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Query:  MEVLKFAAIPIFRSYPLSFATKFLKPINVSIKPPPSDFDFRSEISKDSRAAIAETHPELLDLADDGILVLVDKTKFGPVPAWRAEFVEPQAIWLVGTSHI
        MEVLKFAAIPIFRSYPLSFATKFLKPINVSIKPPPSDFDFRSEIS+DSRAAIAETHPELLDLADDGILVLVDKTKFGPVPAWRAEFVEPQAIWLVGTSHI
Subjt:  MEVLKFAAIPIFRSYPLSFATKFLKPINVSIKPPPSDFDFRSEISKDSRAAIAETHPELLDLADDGILVLVDKTKFGPVPAWRAEFVEPQAIWLVGTSHI

Query:  SSKSVKDVERVVRAVKPDNVVVELCRSR
        SSKSVKDVERVVRAVKPDNVVVELCRSR
Subjt:  SSKSVKDVERVVRAVKPDNVVVELCRSR

A0A5A7SW10 TraB domain-containing protein

5.9e-65

99.23

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Query:  MEVLKFAAIPIFRSYPLSFATKFLKPINVSIKPPPSDFDFRSEISKDSRAAIAETHPELLDLADDGILVLVDKTKFGPVPAWRAEFVEPQAIWLVGTSHI
        MEVLKFAAIPIFRSYPLSFATKFLKPINVSIKPPPSDFDFRSEIS+DSRAAIAETHPELLDLADDGILVLVDKTKFGPVPAWRAEFVEPQAIWLVGTSHI
Subjt:  MEVLKFAAIPIFRSYPLSFATKFLKPINVSIKPPPSDFDFRSEISKDSRAAIAETHPELLDLADDGILVLVDKTKFGPVPAWRAEFVEPQAIWLVGTSHI

Query:  SSKSVKDVERVVRAVKPDNVVVELCRSRQV
        SSKSVKDVERVVRAVKPDNVVVELCRSRQV
Subjt:  SSKSVKDVERVVRAVKPDNVVVELCRSRQV

A0A5D3DF16 TraB domain-containing protein

4.5e-65

99.23

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Query:  MEVLKFAAIPIFRSYPLSFATKFLKPINVSIKPPPSDFDFRSEISKDSRAAIAETHPELLDLADDGILVLVDKTKFGPVPAWRAEFVEPQAIWLVGTSHI
        MEVLKFAAIPIFRSYPLSFATKFLKPINVSIKPPPSDFDFRSEISKDSRAAIAETHPELLDLADDGILVLVDKTKFGPVPAWRAEFVEPQAIWLVGTSHI
Subjt:  MEVLKFAAIPIFRSYPLSFATKFLKPINVSIKPPPSDFDFRSEISKDSRAAIAETHPELLDLADDGILVLVDKTKFGPVPAWRAEFVEPQAIWLVGTSHI

Query:  SSKSVKDVERVVRAVKPDNVVVELCRSRQV
        SSKSVKDV+RVVRAVKPDNVVVELCRSRQV
Subjt:  SSKSVKDVERVVRAVKPDNVVVELCRSRQV

A0A6J1FZW1 traB domain-containing protein isoform X1

5.7e-52

82.81

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Query:  MEVLKFAAIPIFRSYPLSFATKFLKPINVSIKPPPSDFDFRSEISKDSRAAIAETHPELLDLADDGILVLVDKTKFGPVPAWRAEFVEPQAIWLVGTSHI
        ME LK   IPIFR YP S ATK +KPI VSI+PPPSDFDFR EIS+DSRAAIAE HPELLDL DDG LVLV+K +FGPVPAWRAEFVEP+AIWLV TSHI
Subjt:  MEVLKFAAIPIFRSYPLSFATKFLKPINVSIKPPPSDFDFRSEISKDSRAAIAETHPELLDLADDGILVLVDKTKFGPVPAWRAEFVEPQAIWLVGTSHI

Query:  SSKSVKDVERVVRAVKPDNVVVELCRSR
        S KSVKDVERVVRAVKPDNVVVELCRSR
Subjt:  SSKSVKDVERVVRAVKPDNVVVELCRSR

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G05270.1 TraB family protein

2.0e-04

48.65

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Query:  IWLVGTSHISSKSVKDVERVVRAVKPDNVVVELCRSR
        ++LVGT+H+S +S  +VE ++  +KP+ V VELC SR
Subjt:  IWLVGTSHISSKSVKDVERVVRAVKPDNVVVELCRSR

AT2G32340.1 TraB family protein

3.9e-05

51.35

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Query:  IWLVGTSHISSKSVKDVERVVRAVKPDNVVVELCRSR
        ++LVGT+H+S +S ++VE V+ A+KP  V +ELC SR
Subjt:  IWLVGTSHISSKSVKDVERVVRAVKPDNVVVELCRSR

AT5G52030.2 TraB family protein

1.4e-39

64.46

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Query:  PIFRSYPLSFATKFLKPINVSIKPPPSDFDFRSEISKDSRAAIAETHPELLDLADDGILVLVDKTKFGPVPAWRAEFVEPQAIWLVGTSHISSKSVKDVE
        P F  Y      + +K ++VS++ PP DFDFR++I+ +SRAAIA+T+PELLDLAD+G L+L+ K  FGPVPAWR EFVEP+AIWLVGTSHIS +S   VE
Subjt:  PIFRSYPLSFATKFLKPINVSIKPPPSDFDFRSEISKDSRAAIAETHPELLDLADDGILVLVDKTKFGPVPAWRAEFVEPQAIWLVGTSHISSKSVKDVE

Query:  RVVRAVKPDNVVVELCRSRQV
        RVVR VKPDNV VELCRSR+V
Subjt:  RVVRAVKPDNVVVELCRSRQV

Sequences

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CDS sequence

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ATGGAGGTTCTTAAATTCGCTGCCATTCCCATTTTCAGATCTTACCCACTTTCATTTGCCACCAAATTTCTAAAGCCCATCAACGTTTCCATTAAGCCGCCCCCATCGGA
CTTTGATTTCCGATCGGAAATCTCTAAGGATTCTAGAGCCGCCATTGCTGAAACTCACCCTGAGTTGCTTGATTTGGCTGACGATGGCATTTTGGTTTTGGTTGACAAGA
CGAAATTTGGGCCTGTCCCAGCGTGGAGGGCCGAATTCGTGGAACCCCAAGCAATATGGCTGGTTGGAACTTCGCATATTTCTTCTAAATCGGTAAAGGATGTCGAGCGA
GTTGTCCGAGCAGTAAAGCCTGATAATGTAGTCGTCGAGCTTTGCAGGAGCAGGCAAGTTTGA

mRNA sequence

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Protein sequence

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MEVLKFAAIPIFRSYPLSFATKFLKPINVSIKPPPSDFDFRSEISKDSRAAIAETHPELLDLADDGILVLVDKTKFGPVPAWRAEFVEPQAIWLVGTSHISSKSVKDVER
VVRAVKPDNVVVELCRSRQV

IVF0000760 (gene) of Melon (IVF77) v1 genome