| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0047995.1 retrotransposon protein, putative, Ty1-copia sub-class [Cucumis melo var. makuwa] | 0.0 | 52.99 | Show/hide |
Query: MASTRSEVSKFNGNGDFALWRKKIRAILIQHKVAKILDEERLPENITESEKRDMDEMTYSTILLYLSDEVLRLVDEATTIGELWKKLESLYLKKSLSNKI
MASTR EVSKFNG+GDFALWRKKIRAIL+QHKVAKILDEERLP+NITESEKRDMDEM Y TILLYLSDEVLRLVDEATT GELWKKLESLYL KSL NKI
Subjt: MASTRSEVSKFNGNGDFALWRKKIRAILIQHKVAKILDEERLPENITESEKRDMDEMTYSTILLYLSDEVLRLVDEATTIGELWKKLESLYLKKSLSNKI
Query: YIKEKFFGYKMDQSKSLEENLDEFQKIIVDLNNIGEKMSDENQAVILLNSLPEIYREVKAAIKYGRDSLNMSIMLDALKTRNLEIKKECKDGELLMARRR
YIKEKFFGYKMDQSK LEENLDEFQKI+VDLNNIGEKMSDENQAVILLNSLPE YREVKAAIKYG DSL MSI+LDALKTRNLEIKKE KDGELLMAR R
Subjt: YIKEKFFGYKMDQSKSLEENLDEFQKIIVDLNNIGEKMSDENQAVILLNSLPEIYREVKAAIKYGRDSLNMSIMLDALKTRNLEIKKECKDGELLMARRR
Query: SEKKSWKGKERSSRSKSKGKSRKCFLCHKEGHLKKNCPLNKSREASTSEANVTDGYNSVEITNGYDSAETGYESAKVLMVSHRDYRMLGSWIQ-------
SEKKSWKGKERS RSKSKGKSRKCFLCHKEGH KKNCPLNKSREASTSEANVTDGYNS EIT+G DSAETGYESA+VLMVSHRD + +WI
Subjt: SEKKSWKGKERSSRSKSKGKSRKCFLCHKEGHLKKNCPLNKSREASTSEANVTDGYNSVEITNGYDSAETGYESAKVLMVSHRDYRMLGSWIQ-------
Query: ---------------------------------------------------------------------GCTIKSENRVMKVTKGSLVKLRGTLRHGLYV
GCTIKSEN VMKVTKGSLVKLRGTLRHGLYV
Subjt: ---------------------------------------------------------------------GCTIKSENRVMKVTKGSLVKLRGTLRHGLYV
Query: LEGTTVSGSAAIASGKVIDMSMLWHRRLAHVSERGLQALSQQGLLGGVNNVELPFCEHCIMGKSTRVRFGKGKHTTK--------DLWGPTKEARMGG--
LEGTTVSGSAAIASGKV +MSMLWH+RLAHVSERGLQALSQQGLLGGV NVELPFCEHCIMGKSTRV+FGKGKHTTK DLWGPTKE MGG
Subjt: LEGTTVSGSAAIASGKVIDMSMLWHRRLAHVSERGLQALSQQGLLGGVNNVELPFCEHCIMGKSTRVRFGKGKHTTK--------DLWGPTKEARMGG--
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: --------------------DHVVTKVRIASEVRPSVGLDVSSDQPSLVSEIEDTQQSEFD---------------------------------------
DHVVT+VRIASEVRPS+ LD +QP LVSEIEDTQQSEFD
Subjt: --------------------DHVVTKVRIASEVRPSVGLDVSSDQPSLVSEIEDTQQSEFD---------------------------------------
Query: --------------------ADSIEAEPFTFEEAIVYDSKKQWKDAMEVELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKLGTGGNSKPRYKARLVAKG
ADSIEAEP TFEEAIV DSKKQWKDAME ELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIK GTGGNSKPRYKARL+
Subjt: --------------------ADSIEAEPFTFEEAIVYDSKKQWKDAMEVELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKLGTGGNSKPRYKARLVAKG
Query: YTQKEGVDFHEIFSTVVRHSSIRLILSIAVHFDMFIEQMDVTTTFLHGELEEVY------------------RLHKSLYGLKQSPRQWYIRFDTFILKQG
LSIAVHFDMFIEQMDVTTTFLHGELEEV RLHKSLYGLKQSPRQWYI FDTFILKQG
Subjt: YTQKEGVDFHEIFSTVVRHSSIRLILSIAVHFDMFIEQMDVTTTFLHGELEEVY------------------RLHKSLYGLKQSPRQWYIRFDTFILKQG
Query: FHRNSYDACVYWKLSQKAE--------------------------------------SHNSVLGHEHSRS-----------AWWLSLLVIFRKTKS----
FHRNSYDACVYWK SQK +LG + R ++ + LL + + S
Subjt: FHRNSYDACVYWKLSQKAE--------------------------------------SHNSVLGHEHSRS-----------AWWLSLLVIFRKTKS----
Query: --------------------------------------------------------FGSK-----------VLRYLKGSASVSLCYSRDRDKSTLLEGFT
F S VLRYLKGSASVSLCYSRD DKSTLLEGFT
Subjt: --------------------------------------------------------FGSK-----------VLRYLKGSASVSLCYSRDRDKSTLLEGFT
Query: DADYAADLDKRRSLSSHIFRLYDNVVSWKVNLQPVVALLTTESEYISLGEAVKEAVWLKRIVGELLSQKFIPIIHCESQSAIHLAKNPSHHERSKHIDIK
DADYAADLDKRRSLS HIFRLY NVVSWKVNLQPVVAL TTESEYISLGEAVKEAVWLKRIVGELLSQ+FIPIIHC+SQSAIHLAKNPSHHERSKHID+K
Subjt: DADYAADLDKRRSLSSHIFRLYDNVVSWKVNLQPVVALLTTESEYISLGEAVKEAVWLKRIVGELLSQKFIPIIHCESQSAIHLAKNPSHHERSKHIDIK
Query: FYYIRNIIAQKDVEMVKVHKVEN
F+YIRN+IAQKDVE+VKVH VEN
Subjt: FYYIRNIIAQKDVEMVKVHKVEN
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| KAA0050070.1 putative polyprotein [Cucumis melo var. makuwa] | 0.0 | 73.37 | Show/hide |
Query: MASTRSEVSKFNGNGDFALWRKKIRAILIQHKVAKILDEERLPENITESEKRDMDEMTYSTILLYLSDEVLRLVDEATTIGELWKKLESLYLKKSLSNKI
MASTR EVSKFNGNGDFALWRKKIRAIL+QHKVAKILDEERLPENITESEKRDMDEMTYSTILLYLSDEVLRLVDEATTIGELWKKLESLY+KKSLSNKI
Subjt: MASTRSEVSKFNGNGDFALWRKKIRAILIQHKVAKILDEERLPENITESEKRDMDEMTYSTILLYLSDEVLRLVDEATTIGELWKKLESLYLKKSLSNKI
Query: YIKEKFFGYKMDQSKSLEENLDEFQKIIVDLNNIGEKMSDENQAVILLNSLPEIYREVKAAIKYGRDSLNMSIMLDALKTRNLEIKKECKDGELLMARRR
YIKEKFFGYKMDQSK LEENLDEFQKIIVDLNNIGEKMSDENQAVILLNSLPEIYREVKAAIKYGRDSLNMSIMLDALKTRNLEIKKE KDGELLMARRR
Subjt: YIKEKFFGYKMDQSKSLEENLDEFQKIIVDLNNIGEKMSDENQAVILLNSLPEIYREVKAAIKYGRDSLNMSIMLDALKTRNLEIKKECKDGELLMARRR
Query: SEKKSWKGKERSSRSKSKGKSRKCFLCHKEGHLKKNCPLNKSREASTSEANVTDGYNSVEITNGYDSAETGYESAKVLMVSHRDYRMLGSWIQ---GCTI
SEKKSWKGKERSSRSKSK KSRKCFLCHKEGH KKNCPLNKSREASTSEANVTDGYNS EITNGYDSAETGYESAKVLMVSHRDYRMLGSWIQ GCTI
Subjt: SEKKSWKGKERSSRSKSKGKSRKCFLCHKEGHLKKNCPLNKSREASTSEANVTDGYNSVEITNGYDSAETGYESAKVLMVSHRDYRMLGSWIQ---GCTI
Query: KSENRVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVIDMSMLWHRRLAHVSERGLQALSQQGLLGGVNNVELPFCEHCIMGKSTRVRFGKGK
K ENRVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVIDMSMLWHRRLAHVSERGLQALSQQGLL GV NVELPFCEHCIMGKSTRVRFGKGK
Subjt: KSENRVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVIDMSMLWHRRLAHVSERGLQALSQQGLLGGVNNVELPFCEHCIMGKSTRVRFGKGK
Query: HTTK--------DLWGPTKEARMGG---------------------------------------------------------------------------
HTTK DLWGPTKEA MGG
Subjt: HTTK--------DLWGPTKEARMGG---------------------------------------------------------------------------
Query: -----------------------------------------------------------DHVVTKVRIASEVRPSVGLDVSSDQPSLVSEIEDTQQSEFD
DHVVT+VRIASEVRPSVGLDVSSDQPSLVSEIEDTQQSEFD
Subjt: -----------------------------------------------------------DHVVTKVRIASEVRPSVGLDVSSDQPSLVSEIEDTQQSEFD
Query: ------------------------------------------------ADSIEAEPFTFEEAIVYDSKKQWKDAMEVELFSLHKNQTWSLVPKPPNQKLI
ADSIEAEPFTFEEAIVYDSKKQWKDAMEVELFSLHKNQTWSLVPKPPNQKLI
Subjt: ------------------------------------------------ADSIEAEPFTFEEAIVYDSKKQWKDAMEVELFSLHKNQTWSLVPKPPNQKLI
Query: QSKWIYKIKLGTGGNSKPRYKARLVAKGYTQKEGVDFHEIFSTVVRHSSIRLILSIAVHFDMFIEQMDVTTTFLHGELEEVYRLHKSLYGLKQSPRQWYI
QSKWIYKIKLGTGGNSKPRYKARLVAKGYTQKEGVDFHEIFSTVVRH SIRLILSIAVHFDMFIEQMDVTTTFLHGELEEVYRLHKSLYGLKQSPRQWYI
Subjt: QSKWIYKIKLGTGGNSKPRYKARLVAKGYTQKEGVDFHEIFSTVVRHSSIRLILSIAVHFDMFIEQMDVTTTFLHGELEEVYRLHKSLYGLKQSPRQWYI
Query: RFDTFILKQGFHRNSYDACVYWKLSQKAESHNSV-----LGHEHSRSAWWLSLLVI----FRKTKSFGSK---------------VLRYLK--------G
RFDTFILKQGFHRNSYDACVYWKLSQK + N + +G + +SL+V+ F+K K K + + L G
Subjt: RFDTFILKQGFHRNSYDACVYWKLSQKAESHNSV-----LGHEHSRSAWWLSLLVI----FRKTKSFGSK---------------VLRYLK--------G
Query: SASVSLCYSRDRDKSTLLEGFTDADYAADLDKRRSLSSHIFRLYDNVVSWKVNLQPVVALLTTESEYISLGEAVKEAVWLKRIVGELLSQKFIPIIHCES
SASV LCYSRDRDKSTLLEGFTDADYAADLDKRRSLSSHIFRLYDNVVSWKVNLQPVVALLTTESEYISLGEAVKEAVWLKRIVGELLSQKFIPIIHCES
Subjt: SASVSLCYSRDRDKSTLLEGFTDADYAADLDKRRSLSSHIFRLYDNVVSWKVNLQPVVALLTTESEYISLGEAVKEAVWLKRIVGELLSQKFIPIIHCES
Query: QSAIHLAKNPSHHE
QSAIHLAKNPSHHE
Subjt: QSAIHLAKNPSHHE
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| KAA0050719.1 putative gag-pol polyprotein [Cucumis melo var. makuwa] | 0.0 | 55.4 | Show/hide |
Query: MASTRSEVSKFNGNGDFALWRKKIRAILIQHKVAKILDEERLPENITESEKRDMDEMTYSTILLYLSDEVLRLVDEATTIGELWKKLESLYLKKSLSNKI
MASTR EVSKFNG+GDF+LWRKKIRAIL+QHKVAKILDEERLP+NITESEKRDMDEM YSTILLYLSDEVLRLVDEATT GELWKKLESLYL KSL NKI
Subjt: MASTRSEVSKFNGNGDFALWRKKIRAILIQHKVAKILDEERLPENITESEKRDMDEMTYSTILLYLSDEVLRLVDEATTIGELWKKLESLYLKKSLSNKI
Query: YIKEKFFGYKMDQSKSLEENLDEFQKIIVDLNNIGEKMSDENQAVILLNSLPEIYREVKAAIKYGRDSLNMSIMLDALKTRNLEIKKECKDGELLMARRR
YIKEKFFGYKMDQSKSLEENLDEFQKI+VDLNNIGEKMSDENQAVILLNSLPE YREVKAAIKYGRDSL MSI+LDALKTRNLEIKKE KDGELLMAR R
Subjt: YIKEKFFGYKMDQSKSLEENLDEFQKIIVDLNNIGEKMSDENQAVILLNSLPEIYREVKAAIKYGRDSLNMSIMLDALKTRNLEIKKECKDGELLMARRR
Query: SEKKSWKGKERSSRSKSKGKSRKCFLCHKEGHLKKNCPLNKSREASTSEANVTDGYNSVEITNGYDSAETGYESAKVLMVSHRDYRMLGSWIQ-------
SEKKSWKGKERS RSKSKGKSRKCFLCHKEGH KKNCPLNKSREASTSEANVTDGYNS EIT+GYDSAETGYESA+VLMVSHRD + +WI
Subjt: SEKKSWKGKERSSRSKSKGKSRKCFLCHKEGHLKKNCPLNKSREASTSEANVTDGYNSVEITNGYDSAETGYESAKVLMVSHRDYRMLGSWIQ-------
Query: ---------------------------------------------------------------------GCTIKSENRVMKVTKGSLVKLRGTLRHGLYV
GCTIKSEN VMKVTKGSLVKLRGTLRHGLYV
Subjt: ---------------------------------------------------------------------GCTIKSENRVMKVTKGSLVKLRGTLRHGLYV
Query: LEGTTVSGSAAIASGKVIDMSMLWHRRLAHVSERGLQALSQQGLLGGVNNVELPFCEHCIMGKSTRVRFGKGKHTTK--------DLWGPTKEARMGG--
LEGTTVSGSAAIASGKV DMSMLWH+RLAHVSERGLQALSQQGLLGGV NVELPFCEHCIMGKSTRV+FGKGKHTTK DLWGPTKE MGG
Subjt: LEGTTVSGSAAIASGKVIDMSMLWHRRLAHVSERGLQALSQQGLLGGVNNVELPFCEHCIMGKSTRVRFGKGKHTTK--------DLWGPTKEARMGG--
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: --------------------DHVVTKVRIASEVRPSVGLDVSSDQPSLVSEIEDTQQSEFD---------------------------------------
DHVVT+VRIASEVRPS+ LD +QP LVSEIEDTQQSEFD
Subjt: --------------------DHVVTKVRIASEVRPSVGLDVSSDQPSLVSEIEDTQQSEFD---------------------------------------
Query: --------------------ADSIEAEPFTFEEAIVYDSKKQWKDAMEVELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKLGTGGNSKPRYKARLVAKG
ADSIEAEP TFEEAIV DSKKQWKDAME ELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIK GTGGNSKPRYKARLVAKG
Subjt: --------------------ADSIEAEPFTFEEAIVYDSKKQWKDAMEVELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKLGTGGNSKPRYKARLVAKG
Query: YTQKEGVDFHEIFSTVVRHSSIRLILSIAVHFDMFIEQMDVTTTFLHGELEEVY------------------RLHKSLYGLKQSPRQWYIRFDTFILKQG
YTQKEGVDFHEIFS VVRHSSIRLILSIAVHFDMFIEQMDVTT FLHGELEEV RLHKSLYGLKQSPRQWYIRFDTFILKQG
Subjt: YTQKEGVDFHEIFSTVVRHSSIRLILSIAVHFDMFIEQMDVTTTFLHGELEEVY------------------RLHKSLYGLKQSPRQWYIRFDTFILKQG
Query: FHRNSYDACVYWKLSQKAE--------------------------------------SHNSVLGHEHSRS-----------AWWLSLL------------
FHRNSYDACVYWK SQK +LG + R ++ + LL
Subjt: FHRNSYDACVYWKLSQKAE--------------------------------------SHNSVLGHEHSRS-----------AWWLSLL------------
Query: ----------------------------------------------------VIFRKTKSFGSK-------VLRYLKGSASVSLCYSRDRDKSTLLEGFT
+I R + G + VLRYLKGSASVSLCYSRD DKSTLLEGFT
Subjt: ----------------------------------------------------VIFRKTKSFGSK-------VLRYLKGSASVSLCYSRDRDKSTLLEGFT
Query: DADYAADLDKRRSLSSHIFRLYDNVVSWKVNLQPVVALLTTESEYISLGEAVKEAVWLKRIVGELLSQKFIPIIHCESQSAIHLAKNPSHHERSKHIDIK
DADYAADLDKRRSLS HIFRLY NVVSWKVNLQPVVAL TTESEYISLGEAVKEAVWLKRIVGELLSQ+FIPIIHC+SQSAIHLAKNPSHHERSKHID+K
Subjt: DADYAADLDKRRSLSSHIFRLYDNVVSWKVNLQPVVALLTTESEYISLGEAVKEAVWLKRIVGELLSQKFIPIIHCESQSAIHLAKNPSHHERSKHIDIK
Query: FYYIRNIIAQKDVEMVKVHKVEN
F+YIRN+IAQKDVE+VKVH VEN
Subjt: FYYIRNIIAQKDVEMVKVHKVEN
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| KAA0067607.1 retrotransposon protein, putative, Ty1-copia subclass [Cucumis melo var. makuwa] | 0.0 | 60.02 | Show/hide |
Query: MASTRSEVSKFNGNGDFALWRKKIRAILIQHKVAKILDEERLPENITESEKRDMDEMTYSTILLYLSDEVLRLVDEATTIGELWKKLESLYLKKSLSNKI
MASTR E+SKFNGNGDFA+WRKKIR IL+QHKVAKILDEE+LPENITESEKRDMDEMTYSTILLYLSDEVLRLVDEATT GELWKKLESLYL K L NK
Subjt: MASTRSEVSKFNGNGDFALWRKKIRAILIQHKVAKILDEERLPENITESEKRDMDEMTYSTILLYLSDEVLRLVDEATTIGELWKKLESLYLKKSLSNKI
Query: YIKEKFFGYKMDQSKSLEENLDEFQKIIVDLNNIGEKMSDENQAVILLNSLPEIYREVKAAIKYGRDSLNMSIMLDALKTRNLEIKKECKDGELLMARRR
EKFF YKMDQSKSLEENLDEFQKIIVDL+NIGEKMSDENQAVILLNSLPE YREVKAAIKYGRDSL MSI+LDALKTRNLEIKKE KDGELLMAR R
Subjt: YIKEKFFGYKMDQSKSLEENLDEFQKIIVDLNNIGEKMSDENQAVILLNSLPEIYREVKAAIKYGRDSLNMSIMLDALKTRNLEIKKECKDGELLMARRR
Query: SEKKSWKGKERSSRSKSKGKSRKCFLCHKEGHLKKNCPLNKSREASTSEANVTDGYNSVEITNGYDSAETGYESAKVLMVSHRDYRMLGSWIQ-------
SEKKSWKGKERSSRSKSKGKSRKCFLCHK GH KKNCPLNKSREASTSEANVTDGYN EIT+GY+SAE VLMVSHRD + +WI
Subjt: SEKKSWKGKERSSRSKSKGKSRKCFLCHKEGHLKKNCPLNKSREASTSEANVTDGYNSVEITNGYDSAETGYESAKVLMVSHRDYRMLGSWIQ-------
Query: ---------------------------------------------------------------------GCTIKSENRVMKVTKGSLVKLRGTLRHGLYV
GCTIKSEN VMKVTKGSLVKLRGTLRHGLYV
Subjt: ---------------------------------------------------------------------GCTIKSENRVMKVTKGSLVKLRGTLRHGLYV
Query: LEGTTVSGSAAIASGKVIDMSMLWHRRLAHVSERGLQALSQQGLLGGVNNVELPFCEHCIMGKSTRVRFGKGKHTTK--------DLWGPTKEARMGG--
LEGTTVSGS AIASGKV M MLWH RLAHVSERGLQALSQQGLL GV NVEL FCEHCIMGK TRV+FGKGKHTTK DLWGPTKEA MGG
Subjt: LEGTTVSGSAAIASGKVIDMSMLWHRRLAHVSERGLQALSQQGLLGGVNNVELPFCEHCIMGKSTRVRFGKGKHTTK--------DLWGPTKEARMGG--
Query: -----------------------------------------------------------------------------------------DHVVTKVRIAS
DHVVTKVRIAS
Subjt: -----------------------------------------------------------------------------------------DHVVTKVRIAS
Query: EVRPSVGLDVSSDQPSLVSEIEDTQQSEFD-----------------------------------------------------------ADSIEAEPFTF
E RPSVGL SDQP LVS+IEDTQQSEFD AD IE +P TF
Subjt: EVRPSVGLDVSSDQPSLVSEIEDTQQSEFD-----------------------------------------------------------ADSIEAEPFTF
Query: EEAIVYDSKKQWKDAMEVELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKLGTGGNSKPRYKARLVAKGYTQKEGVDFHEIFSTVVRHSSIRLILSIAVH
E+AIV DSKK+WKD MEVELFSLHKNQTWSLVPKP NQKLIQSKWIYKIK GT GNSKPRYKARLVAKGYTQKEGVDFHE+FS VVRHSSIRLILSIAVH
Subjt: EEAIVYDSKKQWKDAMEVELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKLGTGGNSKPRYKARLVAKGYTQKEGVDFHEIFSTVVRHSSIRLILSIAVH
Query: FDMFIEQMDVTTTFLHGELEEV-YRLH------------------------------------KSLYGL--KQSPRQWY--IRFDTFILK-------QGF
FDMFIEQMDVTTTFLHGELEEV Y H K + G+ K+ ++ I +++++K G
Subjt: FDMFIEQMDVTTTFLHGELEEV-YRLH------------------------------------KSLYGL--KQSPRQWY--IRFDTFILK-------QGF
Query: HRNSYDACVYWKLSQKAESHNSVLGHEHSRSAWWLSLLVIFRKTKS-----FGSKVLRYLKGSASVSLCYSRDRDKSTLLEGFTDADYAADLDKRRSLSS
S Y++LS S V E + +S++ F VLRYLKGS SVSLCYSRD DKSTLLEGFTDADY ADLDKRRSLS
Subjt: HRNSYDACVYWKLSQKAESHNSVLGHEHSRSAWWLSLLVIFRKTKS-----FGSKVLRYLKGSASVSLCYSRDRDKSTLLEGFTDADYAADLDKRRSLSS
Query: HIFRLYDNVVSWKVNLQPVVALLTTESEYISLGEAVKEAVWLKRIVGELLSQKFIPIIHCESQSAIHLAKNPSHHERSKHIDIKFYYIRNIIA
HIFRLY NVVSWKVNLQPVVAL TTESEYISLGEAVKEAV L+RIVGELLSQ+FIPIIHC+SQSAI+LAKNP HHERSKHID+KF+YIRN+IA
Subjt: HIFRLYDNVVSWKVNLQPVVALLTTESEYISLGEAVKEAVWLKRIVGELLSQKFIPIIHCESQSAIHLAKNPSHHERSKHIDIKFYYIRNIIA
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| TYK25306.1 putative gag-pol polyprotein [Cucumis melo var. makuwa] | 0.0 | 54.12 | Show/hide |
Query: MASTRSEVSKFNGNGDFALWRKKIRAILIQHKVAKILDEERLPENITESEKRDMDEMTYSTILLYLSDEVLRLVDEATTIGELWKKLESLYLKKSLSNKI
MASTR EVSKFNG+GDFALWRKKIRAIL+QHKVAKILDEERLP+NITESEKRDMDEM YSTILLYLSDEVLRLVDEATT GELWKKLESLYL KSL NKI
Subjt: MASTRSEVSKFNGNGDFALWRKKIRAILIQHKVAKILDEERLPENITESEKRDMDEMTYSTILLYLSDEVLRLVDEATTIGELWKKLESLYLKKSLSNKI
Query: YIKEKFFGYKMDQSKSLEENLDEFQKIIVDLNNIGEKMSDENQAVILLNSLPEIYREVKAAIKYGRDSLNMSIMLDALKTRNLEIKKECKDGELLMARRR
YIKEKFFGYKMDQSKSLEENLDEFQKI+VDLNNIGEKMSDENQAVILLNSLPE YREVKAAIKYGRDSL MSI+LDALKTRNLEIKKE KDGELLMAR R
Subjt: YIKEKFFGYKMDQSKSLEENLDEFQKIIVDLNNIGEKMSDENQAVILLNSLPEIYREVKAAIKYGRDSLNMSIMLDALKTRNLEIKKECKDGELLMARRR
Query: SEKKSWKGKERSSRSKSKGKSRKCFLCHKEGHLKKNCPLNKSREASTSEANVTDGYNSVEITNGYDSAETGYESAKVLMVSHRDYRMLGSWIQ-------
SEKKSWKGKERS RSKSKGKSRKCFLCHKEGH KKNCPLNKSREASTSEANVTDGYNS EIT+GYDSAETGYESA+VLMVSHRD + +WI
Subjt: SEKKSWKGKERSSRSKSKGKSRKCFLCHKEGHLKKNCPLNKSREASTSEANVTDGYNSVEITNGYDSAETGYESAKVLMVSHRDYRMLGSWIQ-------
Query: ---------------------------------------------------------------------GCTIKSENRVMKVTKGSLVKLRGTLRHGLYV
GCTIKSEN VMKVTKGSLVKLRGTLRHGLYV
Subjt: ---------------------------------------------------------------------GCTIKSENRVMKVTKGSLVKLRGTLRHGLYV
Query: LEGTTVSGSAAIASGKVIDMSMLWHRRLAHVSERGLQALSQQGLLGGVNNVELPFCEHCIMGKSTRVRFGKGKHTTK--------DLWGPTKEARMGG--
LEGTTVSGSAAIASGKV DMSMLWH+RLAHVSERGLQALSQQGLLGGV NVELPFCEHCIMGKSTRV+FGKGKHTTK DLWGPTKE MGG
Subjt: LEGTTVSGSAAIASGKVIDMSMLWHRRLAHVSERGLQALSQQGLLGGVNNVELPFCEHCIMGKSTRVRFGKGKHTTK--------DLWGPTKEARMGG--
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: --------------------DHVVTKVRIASEVRPSVGLDVSSDQPSLVSEIEDTQQSEFD---------------------------------------
DHVVT+VRIASEVRPS+ LD +QP LVSEIEDTQQSEFD
Subjt: --------------------DHVVTKVRIASEVRPSVGLDVSSDQPSLVSEIEDTQQSEFD---------------------------------------
Query: --------------------ADSIEAEPFTFEEAIVYDSKKQWKDAMEVELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKLGTGGNSKPRYKARLVAKG
ADSIEAEP TFEEAIV DSKKQWKDAME ELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIK GTGGNSKPRYKARLVAKG
Subjt: --------------------ADSIEAEPFTFEEAIVYDSKKQWKDAMEVELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKLGTGGNSKPRYKARLVAKG
Query: YTQKEGVDFHEIFSTVVRHSSIRLILSIAVHFDMFIEQMDVTTTFLHGELEEVY------------------RLHKSLYGLKQSPRQWYIRFDTFILKQG
YTQKEGVDFHEIFS VVRHSSIRLILSIAVHFDMFIEQMDVTT FLHGELEEV RLHKSLYGLKQSPRQWYIRFDTFILKQG
Subjt: YTQKEGVDFHEIFSTVVRHSSIRLILSIAVHFDMFIEQMDVTTTFLHGELEEVY------------------RLHKSLYGLKQSPRQWYIRFDTFILKQG
Query: FHRNSYDACVYWKLSQKAE--------------------------------------SHNSVLGHEHSRS-----------AWWLSLLVIFRKTKS----
FHRNSYDACVYWK SQK +LG + R ++ + LL + + S
Subjt: FHRNSYDACVYWKLSQKAE--------------------------------------SHNSVLGHEHSRS-----------AWWLSLLVIFRKTKS----
Query: --------------------------------FGSKV---------LRYLKGSASVSLCYSRDRDKSTLLEGFTDADYAADLDKRRSLSSHIFRLYDNVV
GS + L Y SASVSLCYSRD DKSTLLEGFTDADYAADLDKR L
Subjt: --------------------------------FGSKV---------LRYLKGSASVSLCYSRDRDKSTLLEGFTDADYAADLDKRRSLSSHIFRLYDNVV
Query: SWKVNLQPVVALLTTESEYISLGEAVKEAVWLKRIVGELLSQKFIPIIHCESQSAIHLAKNPSHHERSKHIDIKFYYIRNIIAQKDVEMVKVHKVEN
L +EYISLGEAVKEAVWLKRIVGELLSQ+FIPIIHC+SQSAIHLAKNPSHHERSKHID+KF+YIRN+IAQKDVE+VKVH VEN
Subjt: SWKVNLQPVVALLTTESEYISLGEAVKEAVWLKRIVGELLSQKFIPIIHCESQSAIHLAKNPSHHERSKHIDIKFYYIRNIIAQKDVEMVKVHKVEN
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7U2U7 Retrotransposon protein, putative, Ty1-copia sub-class | 0.0e+00 | 53.06 | Show/hide |
Query: MASTRSEVSKFNGNGDFALWRKKIRAILIQHKVAKILDEERLPENITESEKRDMDEMTYSTILLYLSDEVLRLVDEATTIGELWKKLESLYLKKSLSNKI
MASTR EVSKFNG+GDFALWRKKIRAIL+QHKVAKILDEERLP+NITESEKRDMDEM Y TILLYLSDEVLRLVDEATT GELWKKLESLYL KSL NKI
Subjt: MASTRSEVSKFNGNGDFALWRKKIRAILIQHKVAKILDEERLPENITESEKRDMDEMTYSTILLYLSDEVLRLVDEATTIGELWKKLESLYLKKSLSNKI
Query: YIKEKFFGYKMDQSKSLEENLDEFQKIIVDLNNIGEKMSDENQAVILLNSLPEIYREVKAAIKYGRDSLNMSIMLDALKTRNLEIKKECKDGELLMARRR
YIKEKFFGYKMDQSK LEENLDEFQKI+VDLNNIGEKMSDENQAVILLNSLPE YREVKAAIKYG DSL MSI+LDALKTRNLEIKKE KDGELLMAR R
Subjt: YIKEKFFGYKMDQSKSLEENLDEFQKIIVDLNNIGEKMSDENQAVILLNSLPEIYREVKAAIKYGRDSLNMSIMLDALKTRNLEIKKECKDGELLMARRR
Query: SEKKSWKGKERSSRSKSKGKSRKCFLCHKEGHLKKNCPLNKSREASTSEANVTDGYNSVEITNGYDSAETGYESAKVLMVSHRDYRMLGSWI--------
SEKKSWKGKERS RSKSKGKSRKCFLCHKEGH KKNCPLNKSREASTSEANVTDGYNS EIT+G DSAETGYESA+VLMVSHRD + +WI
Subjt: SEKKSWKGKERSSRSKSKGKSRKCFLCHKEGHLKKNCPLNKSREASTSEANVTDGYNSVEITNGYDSAETGYESAKVLMVSHRDYRMLGSWI--------
Query: --------------------------------------------------------------------QGCTIKSENRVMKVTKGSLVKLRGTLRHGLYV
GCTIKSEN VMKVTKGSLVKLRGTLRHGLYV
Subjt: --------------------------------------------------------------------QGCTIKSENRVMKVTKGSLVKLRGTLRHGLYV
Query: LEGTTVSGSAAIASGKVIDMSMLWHRRLAHVSERGLQALSQQGLLGGVNNVELPFCEHCIMGKSTRVRFGKGKHTTK--------DLWGPTKEARMG---
LEGTTVSGSAAIASGKV +MSMLWH+RLAHVSERGLQALSQQGLLGGV NVELPFCEHCIMGKSTRV+FGKGKHTTK DLWGPTKE MG
Subjt: LEGTTVSGSAAIASGKVIDMSMLWHRRLAHVSERGLQALSQQGLLGGVNNVELPFCEHCIMGKSTRVRFGKGKHTTK--------DLWGPTKEARMG---
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: -------------------GDHVVTKVRIASEVRPSVGLDVSSDQPSLVSEIEDTQQSEFD---------------------------------------
GDHVVT+VRIASEVRPS+ LD +QP LVSEIEDTQQSEFD
Subjt: -------------------GDHVVTKVRIASEVRPSVGLDVSSDQPSLVSEIEDTQQSEFD---------------------------------------
Query: --------------------ADSIEAEPFTFEEAIVYDSKKQWKDAMEVELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKLGTGGNSKPRYKARLVAKG
ADSIEAEP TFEEAIV DSKKQWKDAME ELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIK GTGGNSKPRYKA
Subjt: --------------------ADSIEAEPFTFEEAIVYDSKKQWKDAMEVELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKLGTGGNSKPRYKARLVAKG
Query: YTQKEGVDFHEIFSTVVRHSSIRLILSIAVHFDMFIEQMDVTTTFLHGELEEVY------------------RLHKSLYGLKQSPRQWYIRFDTFILKQG
RLILSIAVHFDMFIEQMDVTTTFLHGELEEV RLHKSLYGLKQSPRQWYI FDTFILKQG
Subjt: YTQKEGVDFHEIFSTVVRHSSIRLILSIAVHFDMFIEQMDVTTTFLHGELEEVY------------------RLHKSLYGLKQSPRQWYIRFDTFILKQG
Query: FHRNSYDACVYWKLSQKAE--------------------------------------SHNSVLGHE-----------HSRSAWWLSLLVIFRKTKS----
FHRNSYDACVYWK SQK +LG + S+ ++ + LL + + S
Subjt: FHRNSYDACVYWKLSQKAE--------------------------------------SHNSVLGHE-----------HSRSAWWLSLLVIFRKTKS----
Query: --------------------------------------------------------FGSK-----------VLRYLKGSASVSLCYSRDRDKSTLLEGFT
F S VLRYLKGSASVSLCYSRD DKSTLLEGFT
Subjt: --------------------------------------------------------FGSK-----------VLRYLKGSASVSLCYSRDRDKSTLLEGFT
Query: DADYAADLDKRRSLSSHIFRLYDNVVSWKVNLQPVVALLTTESEYISLGEAVKEAVWLKRIVGELLSQKFIPIIHCESQSAIHLAKNPSHHERSKHIDIK
DADYAADLDKRRSLS HIFRLY NVVSWKVNLQPVVAL TTESEYISLGEAVKEAVWLKRIVGELLSQ+FIPIIHC+SQSAIHLAKNPSHHERSKHID+K
Subjt: DADYAADLDKRRSLSSHIFRLYDNVVSWKVNLQPVVALLTTESEYISLGEAVKEAVWLKRIVGELLSQKFIPIIHCESQSAIHLAKNPSHHERSKHIDIK
Query: FYYIRNIIAQKDVEMVKVHKVEN
F+YIRN+IAQKDVE+VKVH VEN
Subjt: FYYIRNIIAQKDVEMVKVHKVEN
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| A0A5A7U459 Putative polyprotein | 0.0e+00 | 73.37 | Show/hide |
Query: MASTRSEVSKFNGNGDFALWRKKIRAILIQHKVAKILDEERLPENITESEKRDMDEMTYSTILLYLSDEVLRLVDEATTIGELWKKLESLYLKKSLSNKI
MASTR EVSKFNGNGDFALWRKKIRAIL+QHKVAKILDEERLPENITESEKRDMDEMTYSTILLYLSDEVLRLVDEATTIGELWKKLESLY+KKSLSNKI
Subjt: MASTRSEVSKFNGNGDFALWRKKIRAILIQHKVAKILDEERLPENITESEKRDMDEMTYSTILLYLSDEVLRLVDEATTIGELWKKLESLYLKKSLSNKI
Query: YIKEKFFGYKMDQSKSLEENLDEFQKIIVDLNNIGEKMSDENQAVILLNSLPEIYREVKAAIKYGRDSLNMSIMLDALKTRNLEIKKECKDGELLMARRR
YIKEKFFGYKMDQSK LEENLDEFQKIIVDLNNIGEKMSDENQAVILLNSLPEIYREVKAAIKYGRDSLNMSIMLDALKTRNLEIKKE KDGELLMARRR
Subjt: YIKEKFFGYKMDQSKSLEENLDEFQKIIVDLNNIGEKMSDENQAVILLNSLPEIYREVKAAIKYGRDSLNMSIMLDALKTRNLEIKKECKDGELLMARRR
Query: SEKKSWKGKERSSRSKSKGKSRKCFLCHKEGHLKKNCPLNKSREASTSEANVTDGYNSVEITNGYDSAETGYESAKVLMVSHRDYRMLGSWIQ---GCTI
SEKKSWKGKERSSRSKSK KSRKCFLCHKEGH KKNCPLNKSREASTSEANVTDGYNS EITNGYDSAETGYESAKVLMVSHRDYRMLGSWIQ GCTI
Subjt: SEKKSWKGKERSSRSKSKGKSRKCFLCHKEGHLKKNCPLNKSREASTSEANVTDGYNSVEITNGYDSAETGYESAKVLMVSHRDYRMLGSWIQ---GCTI
Query: KSENRVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVIDMSMLWHRRLAHVSERGLQALSQQGLLGGVNNVELPFCEHCIMGKSTRVRFGKGK
K ENRVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVIDMSMLWHRRLAHVSERGLQALSQQGLL GV NVELPFCEHCIMGKSTRVRFGKGK
Subjt: KSENRVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVIDMSMLWHRRLAHVSERGLQALSQQGLLGGVNNVELPFCEHCIMGKSTRVRFGKGK
Query: HTTK--------DLWGPTKEARMG----------------------------------------------------------------------------
HTTK DLWGPTKEA MG
Subjt: HTTK--------DLWGPTKEARMG----------------------------------------------------------------------------
Query: ----------------------------------------------------------GDHVVTKVRIASEVRPSVGLDVSSDQPSLVSEIEDTQQSEFD
GDHVVT+VRIASEVRPSVGLDVSSDQPSLVSEIEDTQQSEFD
Subjt: ----------------------------------------------------------GDHVVTKVRIASEVRPSVGLDVSSDQPSLVSEIEDTQQSEFD
Query: ------------------------------------------------ADSIEAEPFTFEEAIVYDSKKQWKDAMEVELFSLHKNQTWSLVPKPPNQKLI
ADSIEAEPFTFEEAIVYDSKKQWKDAMEVELFSLHKNQTWSLVPKPPNQKLI
Subjt: ------------------------------------------------ADSIEAEPFTFEEAIVYDSKKQWKDAMEVELFSLHKNQTWSLVPKPPNQKLI
Query: QSKWIYKIKLGTGGNSKPRYKARLVAKGYTQKEGVDFHEIFSTVVRHSSIRLILSIAVHFDMFIEQMDVTTTFLHGELEEVYRLHKSLYGLKQSPRQWYI
QSKWIYKIKLGTGGNSKPRYKARLVAKGYTQKEGVDFHEIFSTVVRH SIRLILSIAVHFDMFIEQMDVTTTFLHGELEEVYRLHKSLYGLKQSPRQWYI
Subjt: QSKWIYKIKLGTGGNSKPRYKARLVAKGYTQKEGVDFHEIFSTVVRHSSIRLILSIAVHFDMFIEQMDVTTTFLHGELEEVYRLHKSLYGLKQSPRQWYI
Query: RFDTFILKQGFHRNSYDACVYWKLSQKAESHNSV-----LGHEHSRSAWWLSLLVI----FRKTKSFGSKVLRYL-----------------------KG
RFDTFILKQGFHRNSYDACVYWKLSQK + N + +G + +SL+V+ F+K K K L G
Subjt: RFDTFILKQGFHRNSYDACVYWKLSQKAESHNSV-----LGHEHSRSAWWLSLLVI----FRKTKSFGSKVLRYL-----------------------KG
Query: SASVSLCYSRDRDKSTLLEGFTDADYAADLDKRRSLSSHIFRLYDNVVSWKVNLQPVVALLTTESEYISLGEAVKEAVWLKRIVGELLSQKFIPIIHCES
SASV LCYSRDRDKSTLLEGFTDADYAADLDKRRSLSSHIFRLYDNVVSWKVNLQPVVALLTTESEYISLGEAVKEAVWLKRIVGELLSQKFIPIIHCES
Subjt: SASVSLCYSRDRDKSTLLEGFTDADYAADLDKRRSLSSHIFRLYDNVVSWKVNLQPVVALLTTESEYISLGEAVKEAVWLKRIVGELLSQKFIPIIHCES
Query: QSAIHLAKNPSHHE
QSAIHLAKNPSHHE
Subjt: QSAIHLAKNPSHHE
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| A0A5A7UB25 Putative gag-pol polyprotein | 0.0e+00 | 55.4 | Show/hide |
Query: MASTRSEVSKFNGNGDFALWRKKIRAILIQHKVAKILDEERLPENITESEKRDMDEMTYSTILLYLSDEVLRLVDEATTIGELWKKLESLYLKKSLSNKI
MASTR EVSKFNG+GDF+LWRKKIRAIL+QHKVAKILDEERLP+NITESEKRDMDEM YSTILLYLSDEVLRLVDEATT GELWKKLESLYL KSL NKI
Subjt: MASTRSEVSKFNGNGDFALWRKKIRAILIQHKVAKILDEERLPENITESEKRDMDEMTYSTILLYLSDEVLRLVDEATTIGELWKKLESLYLKKSLSNKI
Query: YIKEKFFGYKMDQSKSLEENLDEFQKIIVDLNNIGEKMSDENQAVILLNSLPEIYREVKAAIKYGRDSLNMSIMLDALKTRNLEIKKECKDGELLMARRR
YIKEKFFGYKMDQSKSLEENLDEFQKI+VDLNNIGEKMSDENQAVILLNSLPE YREVKAAIKYGRDSL MSI+LDALKTRNLEIKKE KDGELLMAR R
Subjt: YIKEKFFGYKMDQSKSLEENLDEFQKIIVDLNNIGEKMSDENQAVILLNSLPEIYREVKAAIKYGRDSLNMSIMLDALKTRNLEIKKECKDGELLMARRR
Query: SEKKSWKGKERSSRSKSKGKSRKCFLCHKEGHLKKNCPLNKSREASTSEANVTDGYNSVEITNGYDSAETGYESAKVLMVSHRDYRMLGSWI--------
SEKKSWKGKERS RSKSKGKSRKCFLCHKEGH KKNCPLNKSREASTSEANVTDGYNS EIT+GYDSAETGYESA+VLMVSHRD + +WI
Subjt: SEKKSWKGKERSSRSKSKGKSRKCFLCHKEGHLKKNCPLNKSREASTSEANVTDGYNSVEITNGYDSAETGYESAKVLMVSHRDYRMLGSWI--------
Query: --------------------------------------------------------------------QGCTIKSENRVMKVTKGSLVKLRGTLRHGLYV
GCTIKSEN VMKVTKGSLVKLRGTLRHGLYV
Subjt: --------------------------------------------------------------------QGCTIKSENRVMKVTKGSLVKLRGTLRHGLYV
Query: LEGTTVSGSAAIASGKVIDMSMLWHRRLAHVSERGLQALSQQGLLGGVNNVELPFCEHCIMGKSTRVRFGKGKHTTK--------DLWGPTKEARMG---
LEGTTVSGSAAIASGKV DMSMLWH+RLAHVSERGLQALSQQGLLGGV NVELPFCEHCIMGKSTRV+FGKGKHTTK DLWGPTKE MG
Subjt: LEGTTVSGSAAIASGKVIDMSMLWHRRLAHVSERGLQALSQQGLLGGVNNVELPFCEHCIMGKSTRVRFGKGKHTTK--------DLWGPTKEARMG---
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: -------------------GDHVVTKVRIASEVRPSVGLDVSSDQPSLVSEIEDTQQSEFD---------------------------------------
GDHVVT+VRIASEVRPS+ LD +QP LVSEIEDTQQSEFD
Subjt: -------------------GDHVVTKVRIASEVRPSVGLDVSSDQPSLVSEIEDTQQSEFD---------------------------------------
Query: --------------------ADSIEAEPFTFEEAIVYDSKKQWKDAMEVELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKLGTGGNSKPRYKARLVAKG
ADSIEAEP TFEEAIV DSKKQWKDAME ELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIK GTGGNSKPRYKARLVAKG
Subjt: --------------------ADSIEAEPFTFEEAIVYDSKKQWKDAMEVELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKLGTGGNSKPRYKARLVAKG
Query: YTQKEGVDFHEIFSTVVRHSSIRLILSIAVHFDMFIEQMDVTTTFLHGELEEVY------------------RLHKSLYGLKQSPRQWYIRFDTFILKQG
YTQKEGVDFHEIFS VVRHSSIRLILSIAVHFDMFIEQMDVTT FLHGELEEV RLHKSLYGLKQSPRQWYIRFDTFILKQG
Subjt: YTQKEGVDFHEIFSTVVRHSSIRLILSIAVHFDMFIEQMDVTTTFLHGELEEVY------------------RLHKSLYGLKQSPRQWYIRFDTFILKQG
Query: FHRNSYDACVYWKLSQKAE--------------------------------------SHNSVLGHE-----------HSRSAWWLSLL------------
FHRNSYDACVYWK SQK +LG + S+ ++ + LL
Subjt: FHRNSYDACVYWKLSQKAE--------------------------------------SHNSVLGHE-----------HSRSAWWLSLL------------
Query: ----------------------------------------------------VIFRKTKSFGSK-------VLRYLKGSASVSLCYSRDRDKSTLLEGFT
+I R + G + VLRYLKGSASVSLCYSRD DKSTLLEGFT
Subjt: ----------------------------------------------------VIFRKTKSFGSK-------VLRYLKGSASVSLCYSRDRDKSTLLEGFT
Query: DADYAADLDKRRSLSSHIFRLYDNVVSWKVNLQPVVALLTTESEYISLGEAVKEAVWLKRIVGELLSQKFIPIIHCESQSAIHLAKNPSHHERSKHIDIK
DADYAADLDKRRSLS HIFRLY NVVSWKVNLQPVVAL TTESEYISLGEAVKEAVWLKRIVGELLSQ+FIPIIHC+SQSAIHLAKNPSHHERSKHID+K
Subjt: DADYAADLDKRRSLSSHIFRLYDNVVSWKVNLQPVVALLTTESEYISLGEAVKEAVWLKRIVGELLSQKFIPIIHCESQSAIHLAKNPSHHERSKHIDIK
Query: FYYIRNIIAQKDVEMVKVHKVEN
F+YIRN+IAQKDVE+VKVH VEN
Subjt: FYYIRNIIAQKDVEMVKVHKVEN
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| A0A5A7VKC2 Retrotransposon protein, putative, Ty1-copia subclass | 0.0e+00 | 60.02 | Show/hide |
Query: MASTRSEVSKFNGNGDFALWRKKIRAILIQHKVAKILDEERLPENITESEKRDMDEMTYSTILLYLSDEVLRLVDEATTIGELWKKLESLYLKKSLSNKI
MASTR E+SKFNGNGDFA+WRKKIR IL+QHKVAKILDEE+LPENITESEKRDMDEMTYSTILLYLSDEVLRLVDEATT GELWKKLESLYL K L N
Subjt: MASTRSEVSKFNGNGDFALWRKKIRAILIQHKVAKILDEERLPENITESEKRDMDEMTYSTILLYLSDEVLRLVDEATTIGELWKKLESLYLKKSLSNKI
Query: YIKEKFFGYKMDQSKSLEENLDEFQKIIVDLNNIGEKMSDENQAVILLNSLPEIYREVKAAIKYGRDSLNMSIMLDALKTRNLEIKKECKDGELLMARRR
KEKFF YKMDQSKSLEENLDEFQKIIVDL+NIGEKMSDENQAVILLNSLPE YREVKAAIKYGRDSL MSI+LDALKTRNLEIKKE KDGELLMAR R
Subjt: YIKEKFFGYKMDQSKSLEENLDEFQKIIVDLNNIGEKMSDENQAVILLNSLPEIYREVKAAIKYGRDSLNMSIMLDALKTRNLEIKKECKDGELLMARRR
Query: SEKKSWKGKERSSRSKSKGKSRKCFLCHKEGHLKKNCPLNKSREASTSEANVTDGYNSVEITNGYDSAETGYESAKVLMVSHRDYRMLGSWI--------
SEKKSWKGKERSSRSKSKGKSRKCFLCHK GH KKNCPLNKSREASTSEANVTDGYN EIT+GY+SAE VLMVSHRD + +WI
Subjt: SEKKSWKGKERSSRSKSKGKSRKCFLCHKEGHLKKNCPLNKSREASTSEANVTDGYNSVEITNGYDSAETGYESAKVLMVSHRDYRMLGSWI--------
Query: --------------------------------------------------------------------QGCTIKSENRVMKVTKGSLVKLRGTLRHGLYV
GCTIKSEN VMKVTKGSLVKLRGTLRHGLYV
Subjt: --------------------------------------------------------------------QGCTIKSENRVMKVTKGSLVKLRGTLRHGLYV
Query: LEGTTVSGSAAIASGKVIDMSMLWHRRLAHVSERGLQALSQQGLLGGVNNVELPFCEHCIMGKSTRVRFGKGKHTTK--------DLWGPTKEARMGG--
LEGTTVSGS AIASGKV M MLWH RLAHVSERGLQALSQQGLL GV NVEL FCEHCIMGK TRV+FGKGKHTTK DLWGPTKEA MGG
Subjt: LEGTTVSGSAAIASGKVIDMSMLWHRRLAHVSERGLQALSQQGLLGGVNNVELPFCEHCIMGKSTRVRFGKGKHTTK--------DLWGPTKEARMGG--
Query: -----------------------------------------------------------------------------------------DHVVTKVRIAS
DHVVTKVRIAS
Subjt: -----------------------------------------------------------------------------------------DHVVTKVRIAS
Query: EVRPSVGLDVSSDQPSLVSEIEDTQQSEFD-----------------------------------------------------------ADSIEAEPFTF
E RPSVGL SDQP LVS+IEDTQQSEFD AD IE +P TF
Subjt: EVRPSVGLDVSSDQPSLVSEIEDTQQSEFD-----------------------------------------------------------ADSIEAEPFTF
Query: EEAIVYDSKKQWKDAMEVELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKLGTGGNSKPRYKARLVAKGYTQKEGVDFHEIFSTVVRHSSIRLILSIAVH
E+AIV DSKK+WKD MEVELFSLHKNQTWSLVPKP NQKLIQSKWIYKIK GT GNSKPRYKARLVAKGYTQKEGVDFHE+FS VVRHSSIRLILSIAVH
Subjt: EEAIVYDSKKQWKDAMEVELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKLGTGGNSKPRYKARLVAKGYTQKEGVDFHEIFSTVVRHSSIRLILSIAVH
Query: FDMFIEQMDVTTTFLHGELEEV-YRLH------------------------------------KSLYGL--KQSPRQWY--IRFDTFILK-------QGF
FDMFIEQMDVTTTFLHGELEEV Y H K + G+ K+ ++ I +++++K G
Subjt: FDMFIEQMDVTTTFLHGELEEV-YRLH------------------------------------KSLYGL--KQSPRQWY--IRFDTFILK-------QGF
Query: HRNSYDACVYWKLSQKAESHNSVLGHEHSRSAWWLSLLVIF-----RKTKSFGSKVLRYLKGSASVSLCYSRDRDKSTLLEGFTDADYAADLDKRRSLSS
S Y++LS S V E + +S++ F ++ VLRYLKGS SVSLCYSRD DKSTLLEGFTDADY ADLDKRRSLS
Subjt: HRNSYDACVYWKLSQKAESHNSVLGHEHSRSAWWLSLLVIF-----RKTKSFGSKVLRYLKGSASVSLCYSRDRDKSTLLEGFTDADYAADLDKRRSLSS
Query: HIFRLYDNVVSWKVNLQPVVALLTTESEYISLGEAVKEAVWLKRIVGELLSQKFIPIIHCESQSAIHLAKNPSHHERSKHIDIKFYYIRNIIA
HIFRLY NVVSWKVNLQPVVAL TTESEYISLGEAVKEAV L+RIVGELLSQ+FIPIIHC+SQSAI+LAKNP HHERSKHID+KF+YIRN+IA
Subjt: HIFRLYDNVVSWKVNLQPVVALLTTESEYISLGEAVKEAVWLKRIVGELLSQKFIPIIHCESQSAIHLAKNPSHHERSKHIDIKFYYIRNIIA
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| A0A5D3DNU1 Putative gag-pol polyprotein | 0.0e+00 | 54.12 | Show/hide |
Query: MASTRSEVSKFNGNGDFALWRKKIRAILIQHKVAKILDEERLPENITESEKRDMDEMTYSTILLYLSDEVLRLVDEATTIGELWKKLESLYLKKSLSNKI
MASTR EVSKFNG+GDFALWRKKIRAIL+QHKVAKILDEERLP+NITESEKRDMDEM YSTILLYLSDEVLRLVDEATT GELWKKLESLYL KSL NKI
Subjt: MASTRSEVSKFNGNGDFALWRKKIRAILIQHKVAKILDEERLPENITESEKRDMDEMTYSTILLYLSDEVLRLVDEATTIGELWKKLESLYLKKSLSNKI
Query: YIKEKFFGYKMDQSKSLEENLDEFQKIIVDLNNIGEKMSDENQAVILLNSLPEIYREVKAAIKYGRDSLNMSIMLDALKTRNLEIKKECKDGELLMARRR
YIKEKFFGYKMDQSKSLEENLDEFQKI+VDLNNIGEKMSDENQAVILLNSLPE YREVKAAIKYGRDSL MSI+LDALKTRNLEIKKE KDGELLMAR R
Subjt: YIKEKFFGYKMDQSKSLEENLDEFQKIIVDLNNIGEKMSDENQAVILLNSLPEIYREVKAAIKYGRDSLNMSIMLDALKTRNLEIKKECKDGELLMARRR
Query: SEKKSWKGKERSSRSKSKGKSRKCFLCHKEGHLKKNCPLNKSREASTSEANVTDGYNSVEITNGYDSAETGYESAKVLMVSHRDYRMLGSWI--------
SEKKSWKGKERS RSKSKGKSRKCFLCHKEGH KKNCPLNKSREASTSEANVTDGYNS EIT+GYDSAETGYESA+VLMVSHRD + +WI
Subjt: SEKKSWKGKERSSRSKSKGKSRKCFLCHKEGHLKKNCPLNKSREASTSEANVTDGYNSVEITNGYDSAETGYESAKVLMVSHRDYRMLGSWI--------
Query: --------------------------------------------------------------------QGCTIKSENRVMKVTKGSLVKLRGTLRHGLYV
GCTIKSEN VMKVTKGSLVKLRGTLRHGLYV
Subjt: --------------------------------------------------------------------QGCTIKSENRVMKVTKGSLVKLRGTLRHGLYV
Query: LEGTTVSGSAAIASGKVIDMSMLWHRRLAHVSERGLQALSQQGLLGGVNNVELPFCEHCIMGKSTRVRFGKGKHTTK--------DLWGPTKEARMG---
LEGTTVSGSAAIASGKV DMSMLWH+RLAHVSERGLQALSQQGLLGGV NVELPFCEHCIMGKSTRV+FGKGKHTTK DLWGPTKE MG
Subjt: LEGTTVSGSAAIASGKVIDMSMLWHRRLAHVSERGLQALSQQGLLGGVNNVELPFCEHCIMGKSTRVRFGKGKHTTK--------DLWGPTKEARMG---
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: -------------------GDHVVTKVRIASEVRPSVGLDVSSDQPSLVSEIEDTQQSEFD---------------------------------------
GDHVVT+VRIASEVRPS+ LD +QP LVSEIEDTQQSEFD
Subjt: -------------------GDHVVTKVRIASEVRPSVGLDVSSDQPSLVSEIEDTQQSEFD---------------------------------------
Query: --------------------ADSIEAEPFTFEEAIVYDSKKQWKDAMEVELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKLGTGGNSKPRYKARLVAKG
ADSIEAEP TFEEAIV DSKKQWKDAME ELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIK GTGGNSKPRYKARLVAKG
Subjt: --------------------ADSIEAEPFTFEEAIVYDSKKQWKDAMEVELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKLGTGGNSKPRYKARLVAKG
Query: YTQKEGVDFHEIFSTVVRHSSIRLILSIAVHFDMFIEQMDVTTTFLHGELEEVY------------------RLHKSLYGLKQSPRQWYIRFDTFILKQG
YTQKEGVDFHEIFS VVRHSSIRLILSIAVHFDMFIEQMDVTT FLHGELEEV RLHKSLYGLKQSPRQWYIRFDTFILKQG
Subjt: YTQKEGVDFHEIFSTVVRHSSIRLILSIAVHFDMFIEQMDVTTTFLHGELEEVY------------------RLHKSLYGLKQSPRQWYIRFDTFILKQG
Query: FHRNSYDACVYWKLSQKAE--------------------------------------SHNSVLGHE-----------HSRSAWWLSLLVIFRKTKS----
FHRNSYDACVYWK SQK +LG + S+ ++ + LL + + S
Subjt: FHRNSYDACVYWKLSQKAE--------------------------------------SHNSVLGHE-----------HSRSAWWLSLLVIFRKTKS----
Query: --------------------------------FGSKV---------LRYLKGSASVSLCYSRDRDKSTLLEGFTDADYAADLDKRRSLSSHIFRLYDNVV
GS + L Y SASVSLCYSRD DKSTLLEGFTDADYAADLDKR L
Subjt: --------------------------------FGSKV---------LRYLKGSASVSLCYSRDRDKSTLLEGFTDADYAADLDKRRSLSSHIFRLYDNVV
Query: SWKVNLQPVVALLTTESEYISLGEAVKEAVWLKRIVGELLSQKFIPIIHCESQSAIHLAKNPSHHERSKHIDIKFYYIRNIIAQKDVEMVKVHKVEN
L +EYISLGEAVKEAVWLKRIVGELLSQ+FIPIIHC+SQSAIHLAKNPSHHERSKHID+KF+YIRN+IAQKDVE+VKVH VEN
Subjt: SWKVNLQPVVALLTTESEYISLGEAVKEAVWLKRIVGELLSQKFIPIIHCESQSAIHLAKNPSHHERSKHIDIKFYYIRNIIAQKDVEMVKVHKVEN
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 7.0e-44 | 28.07 | Show/hide |
Query: PFTFEEAIVYDSKKQWKDAMEVELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKLGTGGNSKPRYKARLVAKGYTQKEGVDFHEIFSTVVRHSSIRLILS
P +F+E D K W++A+ EL + N TW++ +P N+ ++ S+W++ +K GN RYKARLVA+G+TQK +D+ E F+ V R SS R ILS
Subjt: PFTFEEAIVYDSKKQWKDAMEVELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKLGTGGNSKPRYKARLVAKGYTQKEGVDFHEIFSTVVRHSSIRLILS
Query: IAVHFDMFIEQMDVTTTFLHGEL-EEVY---------------RLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVY------------------
+ + +++ + QMDV T FL+G L EE+Y +L+K++YGLKQ+ R W+ F+ + + F +S D C+Y
Subjt: IAVHFDMFIEQMDVTTTFLHGEL-EEVY---------------RLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVY------------------
Query: ---------------------------------------------WKLSQKA-----------ESHNSV------------LGHEHSRSAWWLSLL----
LSQ A E+ N+V L + + SL+
Subjt: ---------------------------------------------WKLSQKA-----------ESHNSV------------LGHEHSRSAWWLSLL----
Query: ---------------VIFRKTKSFGS-------KVLRYLKGSASVSLCYSRDRDKSTLLEGFTDADYAADLDKRRSLSSHIFRLYD-NVVSWKVNLQPVV
++ R + S +VLRYLKG+ + L + ++ + G+ D+D+A R+S + ++F+++D N++ W Q V
Subjt: ---------------VIFRKTKSFGS-------KVLRYLKGSASVSLCYSRDRDKSTLLEGFTDADYAADLDKRRSLSSHIFRLYD-NVVSWKVNLQPVV
Query: ALLTTESEYISLGEAVKEAVWLKRIVGELLSQKFIPI-IHCESQSAIHLAKNPSHHERSKHIDIKFYYIRNIIAQKDVEMVKVHKVEN
A +TE+EY++L EAV+EA+WLK ++ + + PI I+ ++Q I +A NPS H+R+KHIDIK+++ R + Q +V ++ EN
Subjt: ALLTTESEYISLGEAVKEAVWLKRIVGELLSQKFIPI-IHCESQSAIHLAKNPSHHERSKHIDIKFYYIRNIIAQKDVEMVKVHKVEN
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| P04146 Copia protein | 5.8e-14 | 26.61 | Show/hide |
Query: MASTRSEVSKFNGNGDFALWRKKIRAILIQHKVAKILDEERLPENITESEKRDMDEMTYSTILLYLSDEVLRLVDEATTIGELWKKLESLYLKKSLSNKI
M + + F+G +A+W+ +IRA+L + V K++D +P + +S K+ + STI+ YLSD L T ++ + L+++Y +KSL++++
Subjt: MASTRSEVSKFNGNGDFALWRKKIRAILIQHKVAKILDEERLPENITESEKRDMDEMTYSTILLYLSDEVLRLVDEATTIGELWKKLESLYLKKSLSNKI
Query: YIKEKFFGYKMDQSKSLEENLDEFQKIIVDLNNIGEKMSDENQAVILLNSLPEIYREVKAAIK-YGRDSLNMSIMLDALKTRNLEIKKECKD--GELLMA
++++ K+ SL + F ++I +L G K+ + ++ LL +LP Y + AI+ ++L ++ + + L + ++IK + D +++ A
Subjt: YIKEKFFGYKMDQSKSLEENLDEFQKIIVDLNNIGEKMSDENQAVILLNSLPEIYREVKAAIK-YGRDSLNMSIMLDALKTRNLEIKKECKD--GELLMA
Query: RRRSEKKSWKG---KERSSRSKS--KGKSR---KCFLCHKEGHLKKNC
+ ++K K R ++ K KG S+ KC C +EGH+KK+C
Subjt: RRRSEKKSWKG---KERSSRSKS--KGKSR---KCFLCHKEGHLKKNC
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 6.5e-82 | 23.78 | Show/hide |
Query: MASTRSEVSKFNGNGDFALWRKKIRAILIQHKVAKILD-EERLPENITESEKRDMDEMTYSTILLYLSDEVL-RLVDEATTIGELWKKLESLYLKKSLSN
M+ + EV+KFNG+ F+ W++++R +LIQ + K+LD + + P+ + + D+DE S I L+LSD+V+ ++DE T G +W +LESLY+ K+L+N
Subjt: MASTRSEVSKFNGNGDFALWRKKIRAILIQHKVAKILD-EERLPENITESEKRDMDEMTYSTILLYLSDEVL-RLVDEATTIGELWKKLESLYLKKSLSN
Query: KIYIKEKFFGYKMDQSKSLEENLDEFQKIIVDLNNIGEKMSDENQAVILLNSLPEIYREVKAAIKYGRDSLNMSIMLDALKTRNLEIKKECKDGELLM--
K+Y+K++ + M + + +L+ F +I L N+G K+ +E++A++LLNSLP Y + I +G+ ++ + + AL KK G+ L+
Subjt: KIYIKEKFFGYKMDQSKSLEENLDEFQKIIVDLNNIGEKMSDENQAVILLNSLPEIYREVKAAIKYGRDSLNMSIMLDALKTRNLEIKKECKDGELLM--
Query: ARRRSEKKSWKGKERS-----SRSKSKGKSRKCFLCHKEGHLKKNCPLNKSREASTS--------EANVTDGYNSVEITNGYDSAE--TGYESAKVL--M
R RS ++S RS S+++SK + R C+ C++ GH K++CP + + TS A V + N V N + +G ES V+
Subjt: ARRRSEKKSWKGKERS-----SRSKSKGKSRKCFLCHKEGHLKKNCPLNKSREASTS--------EANVTDGYNSVEITNGYDSAE--TGYESAKVL--M
Query: VSHR------------------------------------------------------DYRMLGSWIQGCTIKSE-------NRVMKVTKGSLVKLRGTL
SH D RM + I G + + N+ ++TKGSLV +G
Subjt: VSHR------------------------------------------------------DYRMLGSWIQGCTIKSE-------NRVMKVTKGSLVKLRGTL
Query: RHGLYVLEGTTVSGSAAIASGKV-IDMSMLWHRRLAHVSERGLQALSQQGLLGGVNNVELPFCEHCIMGKSTRVRF------------------------
R LY G A ++ +D LWH+R+ H+SE+GLQ L+++ L+ + C++C+ GK RV F
Subjt: RHGLYVLEGTTVSGSAAIASGKV-IDMSMLWHRRLAHVSERGLQALSQQGLLGGVNNVELPFCEHCIMGKSTRVRF------------------------
Query: --------------------------------------------------------GKGKHTTKD-----------------------------------
G++T+++
Subjt: --------------------------------------------------------GKGKHTTKD-----------------------------------
Query: ---------------------------------------------------------------------------------------------LWGPTKE
LW P K+
Subjt: ---------------------------------------------------------------------------------------------LWGPTKE
Query: ARMGGDHVV---TKVRIASEVR--------------PSVGLDVSS------------DQPSLVSE--------IEDTQ----------------------
+ VV ++VR A+++ PS + +S +QP V E +E+ +
Subjt: ARMGGDHVV---TKVRIASEVR--------------PSVGLDVSS------------DQPSLVSE--------IEDTQ----------------------
Query: ----QSEFDADSIEAEPFTFEEAIVYDSKKQWKDAMEVELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKLGTGGNSKPRYKARLVAKGYTQKEGVDFHE
+E+ S + EP + +E + + K Q AM+ E+ SL KN T+ LV P ++ ++ KW++K+K G RYKARLV KG+ QK+G+DF E
Subjt: ----QSEFDADSIEAEPFTFEEAIVYDSKKQWKDAMEVELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKLGTGGNSKPRYKARLVAKGYTQKEGVDFHE
Query: IFSTVVRHSSIRLILSIAVHFDMFIEQMDVTTTFLHGELEE------------------VYRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVY
IFS VV+ +SIR ILS+A D+ +EQ+DV T FLHG+LEE V +L+KSLYGLKQ+PRQWY++FD+F+ Q + + D CVY
Subjt: IFSTVVRHSSIRLILSIAVHFDMFIEQMDVTTTFLHGELEE------------------VYRLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVY
Query: WK---------------------------------LSQKAESHN----------SVLGHEHSRSAWWLSLLVIFRKTKSFGSK-----------------
+K LS+ + + ++ SR W I R + F K
Subjt: WK---------------------------------LSQKAESHN----------SVLGHEHSRSAWWLSLLVIFRKTKSFGSK-----------------
Query: ------------------------------------------------------------VLRYLKGSASVSLCYSRDRDKSTLLEGFTDADYAADLDKR
+LRYL+G+ LC+ +L+G+TDAD A D+D R
Subjt: ------------------------------------------------------------VLRYLKGSASVSLCYSRDRDKSTLLEGFTDADYAADLDKR
Query: RSLSSHIFRLYDNVVSWKVNLQPVVALLTTESEYISLGEAVKEAVWLKRIVGELLSQKFIPIIHCESQSAIHLAKNPSHHERSKHIDIKFYYIRNIIAQK
+S + ++F +SW+ LQ VAL TTE+EYI+ E KE +WLKR + EL + +++C+SQSAI L+KN +H R+KHID+++++IR ++ +
Subjt: RSLSSHIFRLYDNVVSWKVNLQPVVALLTTESEYISLGEAVKEAVWLKRIVGELLSQKFIPIIHCESQSAIHLAKNPSHHERSKHIDIKFYYIRNIIAQK
Query: DVEMVKVHKVEN
++++K+ EN
Subjt: DVEMVKVHKVEN
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| P93293 Uncharacterized mitochondrial protein AtMg00300 | 9.5e-17 | 42.34 | Show/hide |
Query: VMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVIDMSMLWHRRLAHVSERGLQALSQQGLLGGVNNVELPFCEHCIMGKSTRVRFGKGKHTTK-
V+KV KG L+G LY+L+G+ +G + +A D + LWH RLAH+S+RG++ L ++G L L FCE CI GK+ RV F G+HTTK
Subjt: VMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVIDMSMLWHRRLAHVSERGLQALSQQGLLGGVNNVELPFCEHCIMGKSTRVRFGKGKHTTK-
Query: -------DLWG
DLWG
Subjt: -------DLWG
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 2.3e-26 | 38.3 | Show/hide |
Query: EAEPFTFEEAIVYDSKKQWKDAMEVELFSLHKNQTWSLVPKPPNQ-KLIQSKWIYKIKLGTGGNSKPRYKARLVAKGYTQKEGVDFHEIFSTVVRHSSIR
E+EP T +A+ ++W++AM E+ + N TW LVP PP+ ++ +WI+ K + G S RYKARLVAKGY Q+ G+D+ E FS V++ +SIR
Subjt: EAEPFTFEEAIVYDSKKQWKDAMEVELFSLHKNQTWSLVPKPPNQ-KLIQSKWIYKIKLGTGGNSKPRYKARLVAKGYTQKEGVDFHEIFSTVVRHSSIR
Query: LILSIAVHFDMFIEQMDVTTTFLHGEL-EEVY-----------------RLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVY
++L +AV I Q+DV FL G L ++VY +L K+LYGLKQ+PR WY+ ++L GF + D ++
Subjt: LILSIAVHFDMFIEQMDVTTTFLHGEL-EEVY-----------------RLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVY
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 7.8e-27 | 39.57 | Show/hide |
Query: AEPFTFEEAIVYDSKKQWKDAMEVELFSLHKNQTWSLV-PKPPNQKLIQSKWIYKIKLGTGGNSKPRYKARLVAKGYTQKEGVDFHEIFSTVVRHSSIRL
+EP T +A+ D +W+ AM E+ + N TW LV P PP+ ++ +WI+ K + G S RYKARLVAKGY Q+ G+D+ E FS V++ +SIR+
Subjt: AEPFTFEEAIVYDSKKQWKDAMEVELFSLHKNQTWSLV-PKPPNQKLIQSKWIYKIKLGTGGNSKPRYKARLVAKGYTQKEGVDFHEIFSTVVRHSSIRL
Query: ILSIAVHFDMFIEQMDVTTTFLHGEL-EEVY-----------------RLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVY
+L +AV I Q+DV FL G L +EVY RL K++YGLKQ+PR WY+ T++L GF + D ++
Subjt: ILSIAVHFDMFIEQMDVTTTFLHGEL-EEVY-----------------RLHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVY
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 2.2e-40 | 28.27 | Show/hide |
Query: EPFTFEEAIVYDSKKQWKDAMEVELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKLGTGGNSKPRYKARLVAKGYTQKEGVDFHEIFSTVVRHSSIRLIL
EP T+ EA + W AM+ E+ ++ TW + PPN+K I KW+YKIK + G + RYKARLVAKGYTQ+EG+DF E FS V + +S++LIL
Subjt: EPFTFEEAIVYDSKKQWKDAMEVELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKLGTGGNSKPRYKARLVAKGYTQKEGVDFHEIFSTVVRHSSIRLIL
Query: SIAVHFDMFIEQMDVTTTFLHGEL-EEVYR---------------------LHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKLSQKAE---
+I+ ++ + Q+D++ FL+G+L EE+Y L KS+YGLKQ+ RQW+++F ++ GF ++ D + K++
Subjt: SIAVHFDMFIEQMDVTTTFLHGEL-EEVYR---------------------LHKSLYGLKQSPRQWYIRFDTFILKQGFHRNSYDACVYWKLSQKAE---
Query: ----------SHNSV------------------------LGHEHSRSAWWLSL-----------------------------------------------
S+N LG E +RSA +++
Subjt: ----------SHNSV------------------------LGHEHSRSAWWLSL-----------------------------------------------
Query: -------LVIFRKTKSFG-------------------SKVLRYLKGSASVSLCYSRDRDKSTLLEGFTDADYAADLDKRRSLSSHIFRLYDNVVSWKVNL
L I R SF K+L Y+KG+ L YS + L+ F+DA + + D RRS + + L +++SWK
Subjt: -------LVIFRKTKSFG-------------------SKVLRYLKGSASVSLCYSRDRDKSTLLEGFTDADYAADLDKRRSLSSHIFRLYDNVVSWKVNL
Query: QPVVALLTTESEYISLGEAVKEAVWLKRIVGELLSQKFIP-IIHCESQSAIHLAKNPSHHERSKHIDIKFYYIR
Q VV+ + E+EY +L A E +WL + EL P ++ C++ +AIH+A N HER+KHI+ + +R
Subjt: QPVVALLTTESEYISLGEAVKEAVWLKRIVGELLSQKFIP-IIHCESQSAIHLAKNPSHHERSKHIDIKFYYIR
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| ATMG00300.1 Gag-Pol-related retrotransposon family protein | 6.8e-18 | 42.34 | Show/hide |
Query: VMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVIDMSMLWHRRLAHVSERGLQALSQQGLLGGVNNVELPFCEHCIMGKSTRVRFGKGKHTTK-
V+KV KG L+G LY+L+G+ +G + +A D + LWH RLAH+S+RG++ L ++G L L FCE CI GK+ RV F G+HTTK
Subjt: VMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGKVIDMSMLWHRRLAHVSERGLQALSQQGLLGGVNNVELPFCEHCIMGKSTRVRFGKGKHTTK-
Query: -------DLWG
DLWG
Subjt: -------DLWG
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| ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase) | 7.5e-17 | 47.83 | Show/hide |
Query: WKDAMEVELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKLGTGGNSKPRYKARLVAKGYTQKEGVDFHEIFSTVVRHSSIRLILSIAVHFDM
W AM+ EL +L +N+TW LVP P NQ ++ KW++K KL + G + R KARLVAKG+ Q+EG+ F E +S VVR ++IR IL++A ++
Subjt: WKDAMEVELFSLHKNQTWSLVPKPPNQKLIQSKWIYKIKLGTGGNSKPRYKARLVAKGYTQKEGVDFHEIFSTVVRHSSIRLILSIAVHFDM
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