| GenBank top hits | e value | %identity | Alignment |
|---|
| XP_008454536.1 PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4 [Cucumis melo] | 2.61e-97 | 97.99 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
Query: GQEDGPGGRSAKGMGRGFDDGAKAASGGRGKGGPGGKPGAIRVGGRGRG
G+EDGPGGR AKGMGRGFDDGAKAASGGRGKGGPGGKPGA RVGGRGRG
Subjt: GQEDGPGGRSAKGMGRGFDDGAKAASGGRGKGGPGGKPGAIRVGGRGRG
|
|
| XP_008461936.1 PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4 [Cucumis melo] | 1.84e-97 | 98.66 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPE YIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
Query: GQEDGPGGRSAKGMGRGFDDGAKAASGGRGKGGPGGKPGAIRVGGRGRG
G+EDGPGGRSAKGMGRGFDDGAKAASGGRGKGGPGGKPGAIRVGGRGRG
Subjt: GQEDGPGGRSAKGMGRGFDDGAKAASGGRGKGGPGGKPGAIRVGGRGRG
|
|
| XP_011653886.2 probable U6 snRNA-associated Sm-like protein LSm4 [Cucumis sativus] | 2.14e-96 | 96.64 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
Query: GQEDGPGGRSAKGMGRGFDDGAKAASGGRGKGGPGGKPGAIRVGGRGRG
G+EDGPGGR AKGMGRGFDDGAKA++GGRGKGGPGGKPGA RVGGRGRG
Subjt: GQEDGPGGRSAKGMGRGFDDGAKAASGGRGKGGPGGKPGAIRVGGRGRG
|
|
| XP_022143617.1 probable U6 snRNA-associated Sm-like protein LSm4 [Momordica charantia] | 3.04e-96 | 95.97 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLG+GRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
Query: GQEDGPGGRSAKGMGRGFDDGAKAASGGRGKGGPGGKPGAIRVGGRGRG
G+EDGPGGR AKGMGRGFDDG+KA+SGGRGKGGPGGKPGA RVGGRGRG
Subjt: GQEDGPGGRSAKGMGRGFDDGAKAASGGRGKGGPGGKPGAIRVGGRGRG
|
|
| XP_038896461.1 uncharacterized protein LOC120084721 [Benincasa hispida] | 1.79e-99 | 96.23 | Show/hide |
Query: SSSVCFVSLKMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRK
+SSVCFVSLKMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRK
Subjt: SSSVCFVSLKMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRK
Query: PLGVGRGRGRGQEDGPGGRSAKGMGRGFDDGAKAASGGRGKGGPGGKPGAIRVGGRGRG
P GVGRGRGRG+EDGPGGR AKGMGRGFDD AKAASGGRGKGGPGGKPGA RVGGRGRG
Subjt: PLGVGRGRGRGQEDGPGGRSAKGMGRGFDDGAKAASGGRGKGGPGGKPGAIRVGGRGRG
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0K9I4 U6 snRNA-associated Sm-like protein LSm4 | 1.6e-73 | 97.32 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
Query: GQEDGPGGRSAKGMGRGFDDGAKAASGGRGKGGPGGKPGAIRVGGRGRG
G+EDGPG R AKGMGRGFDDGAKAASGGRGKGGPGGKPGA RVGGRGRG
Subjt: GQEDGPGGRSAKGMGRGFDDGAKAASGGRGKGGPGGKPGAIRVGGRGRG
|
|
| A0A0A0L3Q6 U6 snRNA-associated Sm-like protein LSm4 | 1.3e-78 | 96.23 | Show/hide |
Query: SSSVCFVSLKMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRK
+SSVCF+SLKMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRK
Subjt: SSSVCFVSLKMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRK
Query: PLGVGRGRGRGQEDGPGGRSAKGMGRGFDDGAKAASGGRGKGGPGGKPGAIRVGGRGRG
PLGVGRGRGRG+EDGPG R AKGMGRGFDDGAKAASGGRGKGGPGGKPGA RVGGRGRG
Subjt: PLGVGRGRGRGQEDGPGGRSAKGMGRGFDDGAKAASGGRGKGGPGGKPGAIRVGGRGRG
|
|
| A0A1S3BYD6 U6 snRNA-associated Sm-like protein LSm4 | 1.4e-74 | 97.99 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
Query: GQEDGPGGRSAKGMGRGFDDGAKAASGGRGKGGPGGKPGAIRVGGRGRG
G+EDGPGGR AKGMGRGFDDGAKAASGGRGKGGPGGKPGA RVGGRGRG
Subjt: GQEDGPGGRSAKGMGRGFDDGAKAASGGRGKGGPGGKPGAIRVGGRGRG
|
|
| A0A1S3CFQ0 U6 snRNA-associated Sm-like protein LSm4 | 1.1e-74 | 98.66 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPE YIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
Query: GQEDGPGGRSAKGMGRGFDDGAKAASGGRGKGGPGGKPGAIRVGGRGRG
G+EDGPGGRSAKGMGRGFDDGAKAASGGRGKGGPGGKPGAIRVGGRGRG
Subjt: GQEDGPGGRSAKGMGRGFDDGAKAASGGRGKGGPGGKPGAIRVGGRGRG
|
|
| A0A6J1CRC5 U6 snRNA-associated Sm-like protein LSm4 | 9.3e-74 | 95.97 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLG+GRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
Query: GQEDGPGGRSAKGMGRGFDDGAKAASGGRGKGGPGGKPGAIRVGGRGRG
G+EDGPGGR AKGMGRGFDDG+KA+SGGRGKGGPGGKPGA RVGGRGRG
Subjt: GQEDGPGGRSAKGMGRGFDDGAKAASGGRGKGGPGGKPGAIRVGGRGRG
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| F4K4E3 Sm-like protein LSM4 | 2.5e-52 | 76.51 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEE K+R DRKP GVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
Query: GQEDGPGGRSAKGMGRGFDDGAKAASGGRGKGGPGGKPGAIRVGGRGRG
G +DG GA+ GRG+G GK G R GRGRG
Subjt: GQEDGPGGRSAKGMGRGFDDGAKAASGGRGKGGPGGKPGAIRVGGRGRG
|
|
| Q43582 Probable U6 snRNA-associated Sm-like protein LSm4 | 4.0e-58 | 81.33 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY+RGNTIKYLRVPDEVIDKVQEE KSR DRKP GVGR R R
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
Query: -GQEDGPGGRSAKGMGRGFDDGAKAASGGRGKGGPGGKPGAIRVGGRGRG
G++D GR KG+GRG DDG + GRGKGGP K G R GGRGRG
Subjt: -GQEDGPGGRSAKGMGRGFDDGAKAASGGRGKGGPGGKPGAIRVGGRGRG
|
|
| Q9LGE6 Probable U6 snRNA-associated Sm-like protein LSm4 | 8.1e-59 | 82.78 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEET-KSRADRKPLGVGRGRG
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGD+FWRMPECYIRGNTIKYLRVPDEVIDKVQEET KSR+DR+P GVGRGRG
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEET-KSRADRKPLGVGRGRG
Query: RGQ-EDGPGGRSAKGMGRGFDDGAKAASGGRGKGGPGGKPGAIRVGGRGRG
RG PGGR G+GRG DDG GGRG+GG GGK G I+ GGRGRG
Subjt: RGQ-EDGPGGRSAKGMGRGFDDGAKAASGGRGKGGPGGKPGAIRVGGRGRG
|
|
| Q9QXA5 U6 snRNA-associated Sm-like protein LSm4 | 2.2e-40 | 65 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
MLPLSLLKTAQ HPMLVELKNGETYNGHLV+CD WMNI+LREVICTS+DGD+FWRMPECYIRG+TIKYLR+PDE+ID V+EE GRGRG
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
Query: GQEDGPGGRSAKGMGRG-FDDGAKAASGGRGKGGPGGKPG
Q+ GR G GRG F + G G+G P KPG
Subjt: GQEDGPGGRSAKGMGRG-FDDGAKAASGGRGKGGPGGKPG
|
|
| Q9ZRU9 Probable U6 snRNA-associated Sm-like protein LSm4 | 4.9e-56 | 80 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
MLPLSLLKTAQGHPMLVELK+GETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMP+CYIRGNTIKYLRVPDEVIDKVQEETKSRADRKP GVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
Query: GQEDGPGGRSAKGMGRG-FDDGAKAASGGRGKGGPGGKPGAIRVGGRGRG
G+E+G G R +G GR AKA RG+G GK G GGRGRG
Subjt: GQEDGPGGRSAKGMGRG-FDDGAKAASGGRGKGGPGGKPGAIRVGGRGRG
|
|
| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G20580.1 Small nuclear ribonucleoprotein family protein | 8.5e-11 | 33.33 | Show/hide |
Query: LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPD-----EVIDKVQEETKSRADRKPLGVGR
+P+ LL A GH + VELK+GE Y G ++ C+ N L ++ T+KDG + ++ +IRG+ ++++ +PD + ++ K ++ LGVGR
Subjt: LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPD-----EVIDKVQEETKSRADRKPLGVGR
Query: GRGRGQEDGPGGRSAKGMGRGFDDGAKAASGGRGKGGP
GRG + G+ A G GRG +GGRG P
Subjt: GRGRGQEDGPGGRSAKGMGRGFDDGAKAASGGRGKGGP
|
|
| AT1G76300.1 snRNP core protein SMD3 | 3.8e-11 | 32.84 | Show/hide |
Query: LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVID-KVQEETKSRADRKPLGVGRGRGR
+P+ LL + GH + VE+K+GE Y G ++ C+ N L + T+KDG + ++ +IRG+ +++L +PD + + + ++ + + LGVGRGRG
Subjt: LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVID-KVQEETKSRADRKPLGVGRGRGR
Query: GQEDGPGGRSAKGMGRGFDDGAKAASGGRGKGGP
AKG GRG GGRG P
Subjt: GQEDGPGGRSAKGMGRGFDDGAKAASGGRGKGGP
|
|
| AT4G02840.1 Small nuclear ribonucleoprotein family protein | 6.7e-08 | 38.61 | Show/hide |
Query: VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPD--EVIDKVQEET------KSRADRKPLGVGRGRGRGQEDGPGG
+ELKNG +G + D MN HL+ V T K G + +RGN I+Y +PD + + E+T K A + P G GRGRGRG+ G GG
Subjt: VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPD--EVIDKVQEET------KSRADRKPLGVGRGRGRGQEDGPGG
Query: R
R
Subjt: R
|
|
| AT4G02840.2 Small nuclear ribonucleoprotein family protein | 1.4e-05 | 35.14 | Show/hide |
Query: VELKNGETYNGHLVN----------CDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPD--EVIDKVQEET------KSRADRKPLGVGRGR
+ELKNG +G + + D MN HL+ V T K G + +RGN I+Y +PD + + E+T K A + P G GRGR
Subjt: VELKNGETYNGHLVN----------CDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPD--EVIDKVQEET------KSRADRKPLGVGRGR
Query: GRGQEDGPGGR
GRG+ G GGR
Subjt: GRGQEDGPGGR
|
|
| AT5G27720.1 Small nuclear ribonucleoprotein family protein | 1.8e-53 | 76.51 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEE K+R DRKP GVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPLGVGRGRGR
Query: GQEDGPGGRSAKGMGRGFDDGAKAASGGRGKGGPGGKPGAIRVGGRGRG
G +DG GA+ GRG+G GK G R GRGRG
Subjt: GQEDGPGGRSAKGMGRGFDDGAKAASGGRGKGGPGGKPGAIRVGGRGRG
|
|
