; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0000801 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0000801
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionSquamosa promoter-binding-like protein
Genome locationchr12:21078967..21082814
RNA-Seq ExpressionIVF0000801
SyntenyIVF0000801
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0016020 - membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR004333 - SBP domain
IPR036893 - SBP domain superfamily
IPR044817 - Squamosa promoter-binding-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057003.1 squamosa promoter-binding-like protein 3 [Cucumis melo var. makuwa]8.87e-74100Show/hide
Query:  MATGKADGKRRLNYYEMEEEDEEDEEEEEEEDEDEEQEIDGGGLGFSGDFNKKKKVLTSGGSSNKKSGSGFGTGPPAAAPPPCQADNCNADLSGSKRYHR
        MATGKADGKRRLNYYEMEEEDEEDEEEEEEEDEDEEQEIDGGGLGFSGDFNKKKKVLTSGGSSNKKSGSGFGTGPPAAAPPPCQADNCNADLSGSKRYHR
Subjt:  MATGKADGKRRLNYYEMEEEDEEDEEEEEEEDEDEEQEIDGGGLGFSGDFNKKKKVLTSGGSSNKKSGSGFGTGPPAAAPPPCQADNCNADLSGSKRYHR

Query:  RHKVCEFHAKAPAVAVAGID
        RHKVCEFHAKAPAVAVAGID
Subjt:  RHKVCEFHAKAPAVAVAGID

XP_008442764.1 PREDICTED: squamosa promoter-binding-like protein 3 [Cucumis melo]7.71e-7489.71Show/hide
Query:  MATGKADGKRRLNYYEMEEEDEEDEEEEEEEDEDEEQEIDGGGLGFSGDFNKKKKVLTSGGSSNKKSGSGFGTGPPAAAPPPCQADNCNADLSGSKRYHR
        MATGKADGKRRLNYYEMEEEDEEDEEEEEEEDEDEEQEIDGGGLGFSGDFNKKKKVLTSGGSSNKKSGSGFGTGPPAAAPPPCQADNCNADLSGSKRYHR
Subjt:  MATGKADGKRRLNYYEMEEEDEEDEEEEEEEDEDEEQEIDGGGLGFSGDFNKKKKVLTSGGSSNKKSGSGFGTGPPAAAPPPCQADNCNADLSGSKRYHR

Query:  RHKVCEFHAKAPAVAVAGIDNGSVNNVADFMGYKSL
        RHKVCEFHAKAPAVAVAGID       + F G +  
Subjt:  RHKVCEFHAKAPAVAVAGIDNGSVNNVADFMGYKSL

XP_011653273.1 squamosa promoter-binding-like protein 3 [Cucumis sativus]6.71e-5575Show/hide
Query:  MATGKADGKRRLNYYEMEEEDEEDEEEEEEEDEDEEQEIDGGGLGFSGDFNKKKKVLTSGGSSNKKSGSGFGTGPPAAAPPPCQADNCNADLSGSKRYHR
        MATGKADGKRRL+YYEMEEEDEEDEEE    DEDEEQEID   LGFSGDFNKKKK+ TSGGSSNKKS S FG  P AA PPPCQADNCNADLS SKRYHR
Subjt:  MATGKADGKRRLNYYEMEEEDEEDEEEEEEEDEDEEQEIDGGGLGFSGDFNKKKKVLTSGGSSNKKSGSGFGTGPPAAAPPPCQADNCNADLSGSKRYHR

Query:  RHKVCEFHAKAPAVAVAGIDNGSVNNVADFMGYKSL
        RHKVCEFHAKAP V V GID       + F G +  
Subjt:  RHKVCEFHAKAPAVAVAGIDNGSVNNVADFMGYKSL

XP_038894994.1 squamosa promoter-binding-like protein 3 isoform X1 [Benincasa hispida]2.81e-5475.74Show/hide
Query:  MATGKADGKRRLNYYEMEEEDEEDEEEEEEEDEDEEQEIDGGGLGFSGDFNKKKKVLTSGGSSNKKSGSGFGTGPPAAAPPPCQADNCNADLSGSKRYHR
        MATGKADGKRRLNYYEMEEE+EEDEEEEEEE++ EEQ+I G  LGF+GDFNKKKK+LTSG SSNKKSGSG+G    AAA P CQADNCNADLSGSKRYHR
Subjt:  MATGKADGKRRLNYYEMEEEDEEDEEEEEEEDEDEEQEIDGGGLGFSGDFNKKKKVLTSGGSSNKKSGSGFGTGPPAAAPPPCQADNCNADLSGSKRYHR

Query:  RHKVCEFHAKAPAVAVAGIDNGSVNNVADFMGYKSL
        RHKVCEFHAKAPAVAVAGI        + F G +  
Subjt:  RHKVCEFHAKAPAVAVAGIDNGSVNNVADFMGYKSL

XP_038894995.1 squamosa promoter-binding protein 2-like isoform X2 [Benincasa hispida]2.38e-5484.87Show/hide
Query:  MATGKADGKRRLNYYEMEEEDEEDEEEEEEEDEDEEQEIDGGGLGFSGDFNKKKKVLTSGGSSNKKSGSGFGTGPPAAAPPPCQADNCNADLSGSKRYHR
        MATGKADGKRRLNYYEMEEE+EEDEEEEEEE++ EEQ+I G  LGF+GDFNKKKK+LTSG SSNKKSGSG+G    AAA P CQADNCNADLSGSKRYHR
Subjt:  MATGKADGKRRLNYYEMEEEDEEDEEEEEEEDEDEEQEIDGGGLGFSGDFNKKKKVLTSGGSSNKKSGSGFGTGPPAAAPPPCQADNCNADLSGSKRYHR

Query:  RHKVCEFHAKAPAVAVAGI
        RHKVCEFHAKAPAVAVAGI
Subjt:  RHKVCEFHAKAPAVAVAGI

TrEMBL top hitse value%identityAlignment
A0A0A0LSD9 Squamosa promoter-binding-like protein5.3e-4277.27Show/hide
Query:  MATGKADGKRRLNYYEMEEEDEEDEEEEEEEDEDEEQEIDGGGLGFSGDFNKKKKVLTSGGSSNKKSGSGFGTGPPAAAPPPCQADNCNADLSGSKRYHR
        MATGKADGKRRL+YYEMEEEDEED    EEEDEDEEQEID   LGFSGDFNKKKK+ TSGGSSNKKS S FG  P AA PPPCQADNCNADLS SKRYHR
Subjt:  MATGKADGKRRLNYYEMEEEDEEDEEEEEEEDEDEEQEIDGGGLGFSGDFNKKKKVLTSGGSSNKKSGSGFGTGPPAAAPPPCQADNCNADLSGSKRYHR

Query:  RHKVCEFHAKAPAVAVAGIDNGSVNNVADFMG
        RHKVCEFHAKAP V V GID       + F G
Subjt:  RHKVCEFHAKAPAVAVAGIDNGSVNNVADFMG

A0A1S3B6H6 squamosa promoter-binding-like protein 32.2e-5692.42Show/hide
Query:  MATGKADGKRRLNYYEMEEEDEEDEEEEEEEDEDEEQEIDGGGLGFSGDFNKKKKVLTSGGSSNKKSGSGFGTGPPAAAPPPCQADNCNADLSGSKRYHR
        MATGKADGKRRLNYYEMEEEDEEDEEEEEEEDEDEEQEIDGGGLGFSGDFNKKKKVLTSGGSSNKKSGSGFGTGPPAAAPPPCQADNCNADLSGSKRYHR
Subjt:  MATGKADGKRRLNYYEMEEEDEEDEEEEEEEDEDEEQEIDGGGLGFSGDFNKKKKVLTSGGSSNKKSGSGFGTGPPAAAPPPCQADNCNADLSGSKRYHR

Query:  RHKVCEFHAKAPAVAVAGIDNGSVNNVADFMG
        RHKVCEFHAKAPAVAVAGID       + F G
Subjt:  RHKVCEFHAKAPAVAVAGIDNGSVNNVADFMG

A0A5D3DT58 Squamosa promoter-binding-like protein 34.9e-56100Show/hide
Query:  MATGKADGKRRLNYYEMEEEDEEDEEEEEEEDEDEEQEIDGGGLGFSGDFNKKKKVLTSGGSSNKKSGSGFGTGPPAAAPPPCQADNCNADLSGSKRYHR
        MATGKADGKRRLNYYEMEEEDEEDEEEEEEEDEDEEQEIDGGGLGFSGDFNKKKKVLTSGGSSNKKSGSGFGTGPPAAAPPPCQADNCNADLSGSKRYHR
Subjt:  MATGKADGKRRLNYYEMEEEDEEDEEEEEEEDEDEEQEIDGGGLGFSGDFNKKKKVLTSGGSSNKKSGSGFGTGPPAAAPPPCQADNCNADLSGSKRYHR

Query:  RHKVCEFHAKAPAVAVAGID
        RHKVCEFHAKAPAVAVAGID
Subjt:  RHKVCEFHAKAPAVAVAGID

A0A6J1GT00 Squamosa promoter-binding-like protein2.6e-3361.54Show/hide
Query:  MATGKADGKRRLNYYEMEEEDEEDEEEEEEEDEDEEQEIDGGGLGFSGDFNKKKKVLTSGGSSNKKSGSGFGTGPPAAA---PPPCQADNCNADLSGSKR
        M TGKADGKRRLNYY++EEED+E+EEE +EE++ +      G LGF  DFNKKKK++  GGSSNK SGSG+G     AA    P CQADNCNADLSGSKR
Subjt:  MATGKADGKRRLNYYEMEEEDEEDEEEEEEEDEDEEQEIDGGGLGFSGDFNKKKKVLTSGGSSNKKSGSGFGTGPPAAA---PPPCQADNCNADLSGSKR

Query:  YHRRHKVCEFHAKAPAVAVAGIDNGSVNNVADFMGYKSLMIQK
        YHRRHKVCEFHAKAPAV VAGI        + F G     + K
Subjt:  YHRRHKVCEFHAKAPAVAVAGIDNGSVNNVADFMGYKSLMIQK

A0A6J1KHJ1 Squamosa promoter-binding-like protein1.7e-3265.91Show/hide
Query:  MATGKADGKRRLNYYEMEEEDEEDEEEEEEEDEDEEQEIDGGGLGFSGDFNKKKKVLTSGGSSNKKSGSGFGTGPPAAAPPPCQADNCNADLSGSKRYHR
        MATGKADGKRRLNYY+M          EEEE+E+EE E+  G LGF GDFNKKKK L+SGG SNKKSGSG+G    A A P CQADNCNADLS SKRYH 
Subjt:  MATGKADGKRRLNYYEMEEEDEEDEEEEEEEDEDEEQEIDGGGLGFSGDFNKKKKVLTSGGSSNKKSGSGFGTGPPAAAPPPCQADNCNADLSGSKRYHR

Query:  RHKVCEFHAKAPAVAVAGIDNGSVNNVADFMG
        RHKVCEFHAKA AV VAGI        + F G
Subjt:  RHKVCEFHAKAPAVAVAGIDNGSVNNVADFMG

SwissProt top hitse value%identityAlignment
A2YFT9 Squamosa promoter-binding-like protein 104.7e-1163.27Show/hide
Query:  GFGTGPPAAAPPPCQADNCNADLSGSKRYHRRHKVCEFHAKAPAVAVAG
        G G G     PP CQA+ C ADLSG+K YHRRHKVCE+HAKA  VA +G
Subjt:  GFGTGPPAAAPPPCQADNCNADLSGSKRYHRRHKVCEFHAKAPAVAVAG

O04003 Protein LIGULELESS 11.8e-1071.79Show/hide
Query:  PPPCQADNCNADLSGSKRYHRRHKVCEFHAKAPAVAVAG
        PP CQA+ C ADLS +KRYHRRHKVCE H+KAP V  AG
Subjt:  PPPCQADNCNADLSGSKRYHRRHKVCEFHAKAPAVAVAG

Q01KM7 Squamosa promoter-binding-like protein 81.8e-1071.79Show/hide
Query:  PPPCQADNCNADLSGSKRYHRRHKVCEFHAKAPAVAVAG
        PP CQA+ C ADLS +KRYHRRHKVCE H+KAP V  AG
Subjt:  PPPCQADNCNADLSGSKRYHRRHKVCEFHAKAPAVAVAG

Q0DAE8 Squamosa promoter-binding-like protein 104.7e-1163.27Show/hide
Query:  GFGTGPPAAAPPPCQADNCNADLSGSKRYHRRHKVCEFHAKAPAVAVAG
        G G G     PP CQA+ C ADLSG+K YHRRHKVCE+HAKA  VA +G
Subjt:  GFGTGPPAAAPPPCQADNCNADLSGSKRYHRRHKVCEFHAKAPAVAVAG

Q7XPY1 Squamosa promoter-binding-like protein 81.8e-1071.79Show/hide
Query:  PPPCQADNCNADLSGSKRYHRRHKVCEFHAKAPAVAVAG
        PP CQA+ C ADLS +KRYHRRHKVCE H+KAP V  AG
Subjt:  PPPCQADNCNADLSGSKRYHRRHKVCEFHAKAPAVAVAG

Arabidopsis top hitse value%identityAlignment
AT1G02065.1 squamosa promoter binding protein-like 86.3e-1169.23Show/hide
Query:  PPCQADNCNADLSGSKRYHRRHKVCEFHAKAPAVAVAGI
        P CQA+ CNADLS +K YHRRHKVCEFH+KA  V  AG+
Subjt:  PPCQADNCNADLSGSKRYHRRHKVCEFHAKAPAVAVAGI

AT1G02065.2 squamosa promoter binding protein-like 86.3e-1169.23Show/hide
Query:  PPCQADNCNADLSGSKRYHRRHKVCEFHAKAPAVAVAGI
        P CQA+ CNADLS +K YHRRHKVCEFH+KA  V  AG+
Subjt:  PPCQADNCNADLSGSKRYHRRHKVCEFHAKAPAVAVAGI

AT1G27360.1 squamosa promoter-like 115.9e-0957.5Show/hide
Query:  PPCQADNCNADLSGSKRYHRRHKVCEFHAKAPAVAVAGID
        P CQ D C  DLS +K YHR+HKVCE H+K P V+V+G++
Subjt:  PPCQADNCNADLSGSKRYHRRHKVCEFHAKAPAVAVAGID

AT1G27370.1 squamosa promoter binding protein-like 105.9e-0957.5Show/hide
Query:  PPCQADNCNADLSGSKRYHRRHKVCEFHAKAPAVAVAGID
        P CQ D C  DLS SK YHR+H+VCE H+K P V V+G++
Subjt:  PPCQADNCNADLSGSKRYHRRHKVCEFHAKAPAVAVAGID

AT2G33810.1 squamosa promoter binding protein-like 32.0e-0938.66Show/hide
Query:  MATGKADGKRRLNYYEMEEEDEEDEEEEEEEDEDEEQEIDGGGLGFSGDFNKKKKVLTSGGSSNKKSGSGFGTGPPAAAPPPCQADNCNADLSGSKRYHR
        M   KA+GKR L   E+ EE+EE+EE E+E+  +EE+ ++           KK+K     G +   SG              CQ ++C AD+S +K+YH+
Subjt:  MATGKADGKRRLNYYEMEEEDEEDEEEEEEEDEDEEQEIDGGGLGFSGDFNKKKKVLTSGGSSNKKSGSGFGTGPPAAAPPPCQADNCNADLSGSKRYHR

Query:  RHKVCEFHAKAPAVAVAGI
        RHKVC+FHAKAP V ++G+
Subjt:  RHKVCEFHAKAPAVAVAGI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACTGGAAAAGCTGATGGAAAAAGGAGGCTAAATTATTACGAAATGGAGGAAGAAGATGAAGAAGATGAAGAAGAAGAAGAAGAAGAAGATGAAGATGAGGAACA
AGAAATCGATGGAGGAGGATTAGGGTTTTCAGGGGATTTTAATAAGAAAAAGAAAGTTTTGACTTCTGGGGGTTCTTCTAATAAAAAATCGGGATCTGGGTTCGGTACTG
GACCTCCTGCGGCCGCCCCACCGCCGTGTCAGGCCGATAATTGCAATGCCGATCTGTCTGGTTCTAAGCGGTACCATCGCCGTCATAAGGTCTGTGAGTTTCATGCTAAA
GCTCCGGCGGTTGCTGTGGCCGGAATCGACAACGGTTCTGTCAACAATGTAGCAGATTTCATGGGCTACAAGAGTTTGATGATACAAAAAGGAGTTGTCGGAAGCGGTTG
GCCGGACACAACCAGCGGCGGCGGAAGAGCTCGTCGGATCTCCATGGCGAAAGCTCAACCTAGCAATTAG
mRNA sequenceShow/hide mRNA sequence
AGAAAAAATCCATTTTTCCCCAACCCCATTTCCCCCTTTTTCTTTTCTTTTACCCTTTTCTACTTAAAAATAGAAAAAGAAAACCCAAAAGAAATTGGAAATTGTGGTCC
TCAATCCTCACCTTTAGTACTACTACTACTACTACAAATGTCCTCTGCAAGAAACCAATTTCTTGTTTCTTCTTTCTTCTTCTTAATTACTCTCTCACTATAATCCCTCT
GTATCTCTGCTTCAGCTTTTTTGTAATGGCGACTGGAAAAGCTGATGGAAAAAGGAGGCTAAATTATTACGAAATGGAGGAAGAAGATGAAGAAGATGAAGAAGAAGAAG
AAGAAGAAGATGAAGATGAGGAACAAGAAATCGATGGAGGAGGATTAGGGTTTTCAGGGGATTTTAATAAGAAAAAGAAAGTTTTGACTTCTGGGGGTTCTTCTAATAAA
AAATCGGGATCTGGGTTCGGTACTGGACCTCCTGCGGCCGCCCCACCGCCGTGTCAGGCCGATAATTGCAATGCCGATCTGTCTGGTTCTAAGCGGTACCATCGCCGTCA
TAAGGTCTGTGAGTTTCATGCTAAAGCTCCGGCGGTTGCTGTGGCCGGAATCGACAACGGTTCTGTCAACAATGTAGCAGATTTCATGGGCTACAAGAGTTTGATGATAC
AAAAAGGAGTTGTCGGAAGCGGTTGGCCGGACACAACCAGCGGCGGCGGAAGAGCTCGTCGGATCTCCATGGCGAAAGCTCAACCTAGCAATTAGCAAAATGATGAAGAA
GGGGAATTTTACATTAGCTCTCTCCATGTAACTTAGGCCCTTCCCAATAATATTTTTCTATTGTTGGCCAATGCTCTTCCATTGACCATTATTACCAGATTTGCTTGCTC
TCTCTCTTCTGTCAATCCCGTCTTTTGCTTTTGCTTTGTAGTTTGTACTAGAGACAATTAGTTGCACTGTTGTTAGGGAGGGTCTCGTGTATCTCAAACATTTCCATCCA
TAACCATTTGTGAAAATTATGGATGATTAATCCATTTGCAATGTCAAACAAGATTATGGGTTGCACTTAAA
Protein sequenceShow/hide protein sequence
MATGKADGKRRLNYYEMEEEDEEDEEEEEEEDEDEEQEIDGGGLGFSGDFNKKKKVLTSGGSSNKKSGSGFGTGPPAAAPPPCQADNCNADLSGSKRYHRRHKVCEFHAK
APAVAVAGIDNGSVNNVADFMGYKSLMIQKGVVGSGWPDTTSGGGRARRISMAKAQPSN