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IVF0000803 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0000803
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag/pol protein
Genome locationchr12:10507583..10507990
RNA-Seq ExpressionIVF0000803
SyntenyIVF0000803
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0090304 - nucleic acid metabolic process (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0008234 - cysteine-type peptidase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0140640 - catalytic activity, acting on a nucleic acid (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047411.1 gag/pol protein [Cucumis melo var. makuwa]4.02e-3055.93Show/hide
Query:  SNEWRTLIRCQKPLEIHLQQKKRVELRTSGVRPKKMQARMPQTQFSRPRVKSGPPAVHSLCFVLVISLSIFGACTPRNSTHTPGMLPDTISHGIGREVSS
        SNE+RTL+RCQK L IH  +   + LRTS  R +KM+ARMP TQF    VK+ P  V   C VLVI  S FG  TPR S +  G++P      I R+ SS
Subjt:  SNEWRTLIRCQKPLEIHLQQKKRVELRTSGVRPKKMQARMPQTQFSRPRVKSGPPAVHSLCFVLVISLSIFGACTPRNSTHTPGMLPDTISHGIGREVSS

Query:  LEGELRCDPKRSKRWPML
        LEGELRC PKRSKRWPML
Subjt:  LEGELRCDPKRSKRWPML

KAA0059489.1 ribosomal protein L5 [Cucumis melo var. makuwa]1.03e-3072.84Show/hide
Query:  MPQTQFSRPRVKSGPPAVHSLCFVLVISLSIFGACTPRNSTHTPGMLPDTISHGIGREVSSLEGELRCDPKRSKRWPMLPT
        MP+TQFS PRVKSG P V SLC V VISLSIFGA     S HTPGML  T S GIGRE SSLEG+L C+PK SKRWPMLPT
Subjt:  MPQTQFSRPRVKSGPPAVHSLCFVLVISLSIFGACTPRNSTHTPGMLPDTISHGIGREVSSLEGELRCDPKRSKRWPMLPT

KAA0062888.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa]1.34e-3871.43Show/hide
Query:  RTSGVRPKKMQARMPQTQFSRPRVKSGPPAVHSLCFVLVISLSIFGACTPRNSTHTPGMLPDTISHGIGREVSSLEGELRCDPKRSKRWPMLPTCGERSS
        RTSG  PKK +ARMP++QFSR   KS  P V SLCFVLVI+LSIF A TPR STHT GMLPD  S GIG+E SSLEGEL C+PKRSKRW MLPT  ERSS
Subjt:  RTSGVRPKKMQARMPQTQFSRPRVKSGPPAVHSLCFVLVISLSIFGACTPRNSTHTPGMLPDTISHGIGREVSSLEGELRCDPKRSKRWPMLPTCGERSS

Query:  GVGNH
        G+ NH
Subjt:  GVGNH

TYK15439.1 uncharacterized protein E5676_scaffold477G00010 [Cucumis melo var. makuwa]1.09e-3475.61Show/hide
Query:  VKSGPPAVHSLCFVLVISLSIFGACTPRNSTHTPGMLPDTISHGIGREVSSLEGELRCDPKRSKRWPMLPTCGERSSGVGNH
        VKSGPP V S+C VLVI LSIFGA  PR STHTPGMLPD  S GI RE  SLEGEL CDPKRS+RWPMLPT G+RSS V NH
Subjt:  VKSGPPAVHSLCFVLVISLSIFGACTPRNSTHTPGMLPDTISHGIGREVSSLEGELRCDPKRSKRWPMLPTCGERSSGVGNH

TYK22521.1 uncharacterized protein E5676_scaffold387G00220 [Cucumis melo var. makuwa]7.73e-4138.71Show/hide
Query:  MANVSNEWRTLIRCQKPLEIHLQQKKRVEL----------------------------------------------------------------------
        MAN SNEWR L+RCQKPLE+HLQ++KRVEL                                                                      
Subjt:  MANVSNEWRTLIRCQKPLEIHLQQKKRVEL----------------------------------------------------------------------

Query:  --------------------RTSGVRPKKMQARMPQTQFSRPRVKSGPPAVHSLCFVLVISLSIFGACTPRNSTHTPGMLPDTISH--------------
                            RTSG RPKK +ARMPQTQFSRP  KS PP V +LC VLV SLSIFGA TPR STHTPGMLPDT S               
Subjt:  --------------------RTSGVRPKKMQARMPQTQFSRPRVKSGPPAVHSLCFVLVISLSIFGACTPRNSTHTPGMLPDTISH--------------

Query:  ----------------------------------------GIGREVSSLEGELRCDPKRSKRWPMLPTCGERSSGVGNH
                                                GIGRE SSLEGEL CDPK SKRWPMLPT GERSSG  NH
Subjt:  ----------------------------------------GIGREVSSLEGELRCDPKRSKRWPMLPTCGERSSGVGNH

TrEMBL top hitse value%identityAlignment
A0A5A7V5J2 Non-LTR retroelement reverse transcriptase-like protein8.0e-3371.43Show/hide
Query:  RTSGVRPKKMQARMPQTQFSRPRVKSGPPAVHSLCFVLVISLSIFGACTPRNSTHTPGMLPDTISHGIGREVSSLEGELRCDPKRSKRWPMLPTCGERSS
        RTSG  PKK +ARMP++QFSR   KS  P V SLCFVLVI+LSIF A TPR STHT GMLPD  S GIG+E SSLEGEL C+PKRSKRW MLPT  ERSS
Subjt:  RTSGVRPKKMQARMPQTQFSRPRVKSGPPAVHSLCFVLVISLSIFGACTPRNSTHTPGMLPDTISHGIGREVSSLEGELRCDPKRSKRWPMLPTCGERSS

Query:  GVGNH
        G+ NH
Subjt:  GVGNH

A0A5D3CUK8 Gag/pol protein7.3e-2655.93Show/hide
Query:  SNEWRTLIRCQKPLEIHLQQKKRVELRTSGVRPKKMQARMPQTQFSRPRVKSGPPAVHSLCFVLVISLSIFGACTPRNSTHTPGMLPDTISHGIGREVSS
        SNE+RTL+RCQK L IH  +   + LRTS  R +KM+ARMP TQF    VK+ P  V   C VLVI  S FG  TPR S +  G++P      I R+ SS
Subjt:  SNEWRTLIRCQKPLEIHLQQKKRVELRTSGVRPKKMQARMPQTQFSRPRVKSGPPAVHSLCFVLVISLSIFGACTPRNSTHTPGMLPDTISHGIGREVSS

Query:  LEGELRCDPKRSKRWPML
        LEGELRC PKRSKRWPML
Subjt:  LEGELRCDPKRSKRWPML

A0A5D3CZ27 ULP_PROTEASE domain-containing protein8.6e-2775.61Show/hide
Query:  VKSGPPAVHSLCFVLVISLSIFGACTPRNSTHTPGMLPDTISHGIGREVSSLEGELRCDPKRSKRWPMLPTCGERSSGVGNH
        VKSGPP V S+C VLVI LSIFGA  PR STHTPGMLPD  S GI RE  SLEGEL CDPKRS+RWPMLPT G+RSS V NH
Subjt:  VKSGPPAVHSLCFVLVISLSIFGACTPRNSTHTPGMLPDTISHGIGREVSSLEGELRCDPKRSKRWPMLPTCGERSSGVGNH

A0A5D3DFP2 Uncharacterized protein8.6e-3538.71Show/hide
Query:  MANVSNEWRTLIRCQKPLEIHLQQKKRVEL----------------------------------------------------------------------
        MAN SNEWR L+RCQKPLE+HLQ++KRVEL                                                                      
Subjt:  MANVSNEWRTLIRCQKPLEIHLQQKKRVEL----------------------------------------------------------------------

Query:  --------------------RTSGVRPKKMQARMPQTQFSRPRVKSGPPAVHSLCFVLVISLSIFGACTPRNSTHTPGMLPDTISH--------------
                            RTSG RPKK +ARMPQTQFSRP  KS PP V +LC VLV SLSIFGA TPR STHTPGMLPDT S               
Subjt:  --------------------RTSGVRPKKMQARMPQTQFSRPRVKSGPPAVHSLCFVLVISLSIFGACTPRNSTHTPGMLPDTISH--------------

Query:  ----------------------------------------GIGREVSSLEGELRCDPKRSKRWPMLPTCGERSSGVGNH
                                                GIGRE SSLEGEL CDPK SKRWPMLPT GERSSG  NH
Subjt:  ----------------------------------------GIGREVSSLEGELRCDPKRSKRWPMLPTCGERSSGVGNH

A0A5D3E5W4 NBS-LRR type resistance protein1.5e-2350Show/hide
Query:  MANVSNEWRTLIRCQKPLEIHLQQKKRVELRTS-GVRPKKMQARMPQTQFSRPRVKSGPPAVHSLCFVLVISLSIFGACTPRNSTHTPGMLPDTISHGIG
        M + SNEWRTL+RCQKPLE+HLQ++KR EL     +  +          FS    K  P     L  +   S  +    T + ST TP MLPDT S GIG
Subjt:  MANVSNEWRTLIRCQKPLEIHLQQKKRVELRTS-GVRPKKMQARMPQTQFSRPRVKSGPPAVHSLCFVLVISLSIFGACTPRNSTHTPGMLPDTISHGIG

Query:  REVSSLEGELRCDPKRSKRWPMLPTCGERSSGVGNH
        ++ SSLEGE RCDPK+SK WPMLPT  +RSSGV NH
Subjt:  REVSSLEGELRCDPKRSKRWPMLPTCGERSSGVGNH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAATGTTTCTAACGAGTGGCGAACGCTCATCCGGTGTCAGAAACCACTGGAAATACACTTGCAGCAAAAGAAACGAGTTGAGCTGAGGACTTCTGGTGTTCGTCC
CAAGAAAATGCAAGCGAGAATGCCCCAAACTCAGTTTTCTCGTCCTAGGGTTAAAAGCGGTCCCCCGGCGGTTCACTCCCTTTGCTTCGTATTGGTCATTAGTCTTTCGA
TCTTTGGGGCTTGTACTCCGAGGAATTCTACCCACACTCCTGGCATGCTCCCTGACACGATTTCCCATGGTATAGGTCGGGAAGTGAGTTCGTTGGAGGGAGAACTAAGG
TGCGACCCAAAACGGTCCAAAAGATGGCCAATGCTTCCAACGTGTGGCGAACGCTCGTCCGGTGTTGGAAACCACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTAATGTTTCTAACGAGTGGCGAACGCTCATCCGGTGTCAGAAACCACTGGAAATACACTTGCAGCAAAAGAAACGAGTTGAGCTGAGGACTTCTGGTGTTCGTCC
CAAGAAAATGCAAGCGAGAATGCCCCAAACTCAGTTTTCTCGTCCTAGGGTTAAAAGCGGTCCCCCGGCGGTTCACTCCCTTTGCTTCGTATTGGTCATTAGTCTTTCGA
TCTTTGGGGCTTGTACTCCGAGGAATTCTACCCACACTCCTGGCATGCTCCCTGACACGATTTCCCATGGTATAGGTCGGGAAGTGAGTTCGTTGGAGGGAGAACTAAGG
TGCGACCCAAAACGGTCCAAAAGATGGCCAATGCTTCCAACGTGTGGCGAACGCTCGTCCGGTGTTGGAAACCACTAG
Protein sequenceShow/hide protein sequence
MANVSNEWRTLIRCQKPLEIHLQQKKRVELRTSGVRPKKMQARMPQTQFSRPRVKSGPPAVHSLCFVLVISLSIFGACTPRNSTHTPGMLPDTISHGIGREVSSLEGELR
CDPKRSKRWPMLPTCGERSSGVGNH