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IVF0000820 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0000820
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionIntegrase catalytic domain-containing protein
Genome locationchr09:5341165..5341497
RNA-Seq ExpressionIVF0000820
SyntenyIVF0000820
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK22885.1 hypothetical protein E5676_scaffold334G00240 [Cucumis melo var. makuwa]7.47e-1795.12Show/hide
Query:  MQIARVRLGCGSETTWSSCDLRGLTAGVVSTWPTIDNYTAS
        MQIARVRLGCGSETTWSSCDLRGLTAGVVSTWPTIDNYT +
Subjt:  MQIARVRLGCGSETTWSSCDLRGLTAGVVSTWPTIDNYTAS
TrEMBL top hitse value%identityAlignment
A0A5D3DH42 Integrase catalytic domain-containing protein6.1e-1495.12Show/hide
Query:  MQIARVRLGCGSETTWSSCDLRGLTAGVVSTWPTIDNYTAS
        MQIARVRLGCGSETTWSSCDLRGLTAGVVSTWPTIDNYT +
Subjt:  MQIARVRLGCGSETTWSSCDLRGLTAGVVSTWPTIDNYTAS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAATAGCTCGCGTGCGGCTTGGGTGTGGCTCAGAGACGACTTGGAGTTCGTGTGACTTGCGAGGGTTAACAGCTGGGGTGGTTTCAACTTGGCCGACGATCGATAA
CTACACGGCTTCGACGGTTGGGCACGAAGGACGCGAACCGAAGATCATAACAGTCAACATCTATGAGCGAAGAAACGAACGACTTGCGACGATGAAATTGGGCTCGGTAA
GGTGGATCAACACGAAACTTCGGCTAGGGTTGACGACAAGGTCTGATGGCGGTGGAGGCTCGTCGACGGCGGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGCAAATAGCTCGCGTGCGGCTTGGGTGTGGCTCAGAGACGACTTGGAGTTCGTGTGACTTGCGAGGGTTAACAGCTGGGGTGGTTTCAACTTGGCCGACGATCGATAA
CTACACGGCTTCGACGGTTGGGCACGAAGGACGCGAACCGAAGATCATAACAGTCAACATCTATGAGCGAAGAAACGAACGACTTGCGACGATGAAATTGGGCTCGGTAA
GGTGGATCAACACGAAACTTCGGCTAGGGTTGACGACAAGGTCTGATGGCGGTGGAGGCTCGTCGACGGCGGAATAG
Protein sequenceShow/hide protein sequence
MQIARVRLGCGSETTWSSCDLRGLTAGVVSTWPTIDNYTASTVGHEGREPKIITVNIYERRNERLATMKLGSVRWINTKLRLGLTTRSDGGGGSSTAE