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IVF0000823 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0000823
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionReverse transcriptase
Genome locationchr08:9431423..9431614
RNA-Seq ExpressionIVF0000823
SyntenyIVF0000823
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035002.1 polyprotein [Cucumis melo var. makuwa]3.10e-1357.14Show/hide
Query:  MELIKDYNCTITYHPRKANVVVDALSRKNPSRESKGRIPLLKELKGCKAILNIRSTGNLIARF
        MELIKD++CTI YH  KANVV D LSRK+   ES GRI LL+EL+  K+ ++  S G+ +ARF
Subjt:  MELIKDYNCTITYHPRKANVVVDALSRKNPSRESKGRIPLLKELKGCKAILNIRSTGNLIARF

KAA0054749.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]5.60e-2173.02Show/hide
Query:  MELIKDYNCTITYHPRKANVVVDALSRKNPSRESKGRIPLLKELKGCKAILNIRSTGNLIARF
        MELIKDYN TI YHP KANVV +ALSRKNPS E KGRI  +KEL+ CK ILN    GNLIARF
Subjt:  MELIKDYNCTITYHPRKANVVVDALSRKNPSRESKGRIPLLKELKGCKAILNIRSTGNLIARF

KAA0058456.1 CCHC-type integrase [Cucumis melo var. makuwa]1.48e-1963.49Show/hide
Query:  MELIKDYNCTITYHPRKANVVVDALSRKNPSRESKGRIPLLKELKGCKAILNIRSTGNLIARF
        M+LIKDY+CTITYH  KAN++ DALS K PS  ++GR+ LL+ELKG K IL  R++GNL+ARF
Subjt:  MELIKDYNCTITYHPRKANVVVDALSRKNPSRESKGRIPLLKELKGCKAILNIRSTGNLIARF

KAA0059914.1 CCHC-type integrase [Cucumis melo var. makuwa]6.75e-2068.25Show/hide
Query:  MELIKDYNCTITYHPRKANVVVDALSRKNPSRESKGRIPLLKELKGCKAILNIRSTGNLIARF
        MELIKDY+CTI YH  KANV  DALSRK+ S+E+KG++ LL EL+ CK ILN R  GNLIARF
Subjt:  MELIKDYNCTITYHPRKANVVVDALSRKNPSRESKGRIPLLKELKGCKAILNIRSTGNLIARF

KAA0067194.1 polyprotein [Cucumis melo var. makuwa]4.52e-1860.32Show/hide
Query:  MELIKDYNCTITYHPRKANVVVDALSRKNPSRESKGRIPLLKELKGCKAILNIRSTGNLIARF
        M+LIKDY+CTI Y+PRK NV+ DALSRK+ S  +KGR+ LLK+L+G K +LN  + GN +ARF
Subjt:  MELIKDYNCTITYHPRKANVVVDALSRKNPSRESKGRIPLLKELKGCKAILNIRSTGNLIARF

TrEMBL top hitse value%identityAlignment
A0A5A7UKK4 Reverse transcriptase2.6e-1057.58Show/hide
Query:  MELIKDYNCTITYHPRKANVVVDALSRKN--PSRESKG-RIPLLKELKGCKAILNIRSTGNLIARF
        +ELIKDY+CTI YHP KANVV DALSRK+  P   S G R+ LL EL+G KA+++   +G+L+A+F
Subjt:  MELIKDYNCTITYHPRKANVVVDALSRKN--PSRESKG-RIPLLKELKGCKAILNIRSTGNLIARF

A0A5A7UMR3 DNA/RNA polymerases superfamily protein1.2e-1573.02Show/hide
Query:  MELIKDYNCTITYHPRKANVVVDALSRKNPSRESKGRIPLLKELKGCKAILNIRSTGNLIARF
        MELIKDYN TI YHP KANVV +ALSRKNPS E KGRI  +KEL+ CK ILN    GNLIARF
Subjt:  MELIKDYNCTITYHPRKANVVVDALSRKNPSRESKGRIPLLKELKGCKAILNIRSTGNLIARF

A0A5A7UWA6 CCHC-type integrase1.5e-1363.49Show/hide
Query:  MELIKDYNCTITYHPRKANVVVDALSRKNPSRESKGRIPLLKELKGCKAILNIRSTGNLIARF
        M+LIKDY+CTITYH  KAN++ DALS K PS  ++GR+ LL+ELKG K IL  R++GNL+ARF
Subjt:  MELIKDYNCTITYHPRKANVVVDALSRKNPSRESKGRIPLLKELKGCKAILNIRSTGNLIARF

A0A5A7VIK8 Polyprotein1.3e-1260.32Show/hide
Query:  MELIKDYNCTITYHPRKANVVVDALSRKNPSRESKGRIPLLKELKGCKAILNIRSTGNLIARF
        M+LIKDY+CTI Y+PRK NV+ DALSRK+ S  +KGR+ LLK+L+G K +LN  + GN +ARF
Subjt:  MELIKDYNCTITYHPRKANVVVDALSRKNPSRESKGRIPLLKELKGCKAILNIRSTGNLIARF

A0A5D3DMM3 CCHC-type integrase1.0e-1468.25Show/hide
Query:  MELIKDYNCTITYHPRKANVVVDALSRKNPSRESKGRIPLLKELKGCKAILNIRSTGNLIARF
        MELIKDY+CTI YH  KANV  DALSRK+ S+E+KG++ LL EL+ CK ILN R  GNLIARF
Subjt:  MELIKDYNCTITYHPRKANVVVDALSRKNPSRESKGRIPLLKELKGCKAILNIRSTGNLIARF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACTAATTAAAGATTACAATTGCACAATCACATATCACCCTAGAAAGGCTAACGTTGTAGTCGATGCGTTAAGTAGGAAAAACCCAAGTAGAGAGAGTAAAGGAAG
GATACCCTTACTAAAGGAATTGAAAGGTTGCAAGGCGATTCTAAACATAAGGTCAACTGGAAACCTGATAGCACGCTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAACTAATTAAAGATTACAATTGCACAATCACATATCACCCTAGAAAGGCTAACGTTGTAGTCGATGCGTTAAGTAGGAAAAACCCAAGTAGAGAGAGTAAAGGAAG
GATACCCTTACTAAAGGAATTGAAAGGTTGCAAGGCGATTCTAAACATAAGGTCAACTGGAAACCTGATAGCACGCTTCTAG
Protein sequenceShow/hide protein sequence
MELIKDYNCTITYHPRKANVVVDALSRKNPSRESKGRIPLLKELKGCKAILNIRSTGNLIARF