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IVF0000834 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0000834
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRT_RNaseH_2 domain-containing protein
Genome locationchr01:9463132..9463458
RNA-Seq ExpressionIVF0000834
SyntenyIVF0000834
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048713.1 hypothetical protein E6C27_scaffold43G00050 [Cucumis melo var. makuwa]4.16e-67100Show/hide
Query:  MIYSESFTVPYSISRMDLSRALCDLGASINLMHLSIFKKVEIGEVQPTHMRLQFADRSIVKPKEKVEDILVKADKFYFSQTSSFWTTKLTERYLSSWGGH
        MIYSESFTVPYSISRMDLSRALCDLGASINLMHLSIFKKVEIGEVQPTHMRLQFADRSIVKPKEKVEDILVKADKFYFSQTSSFWTTKLTERYLSSWGGH
Subjt:  MIYSESFTVPYSISRMDLSRALCDLGASINLMHLSIFKKVEIGEVQPTHMRLQFADRSIVKPKEKVEDILVKADKFYFSQTSSFWTTKLTERYLSSWGGH

Query:  SFQLVTSS
        SFQLVTSS
Subjt:  SFQLVTSS

TYK11062.1 uncharacterized protein E5676_scaffold73G00470 [Cucumis melo var. makuwa]1.15e-2674.32Show/hide
Query:  ESFTVPYSISRMDLSRALCDLGASINLMHLSIFKKVEIGEVQPTHMRLQFADRSIVKPKEKVEDILVKADKFYF
         SFTVP SI+ MDL   LCDLGASINLM LSIFKK+EI EVQP HMRLQF DRSI K   K+EDILVK DKF F
Subjt:  ESFTVPYSISRMDLSRALCDLGASINLMHLSIFKKVEIGEVQPTHMRLQFADRSIVKPKEKVEDILVKADKFYF

TYK25836.1 uncharacterized protein E5676_scaffold436G00440 [Cucumis melo var. makuwa]5.00e-2771.79Show/hide
Query:  MIYSESFTVPYSISRMDLSRALCDLGASINLMHLSIFKKVEIGEVQPTHMRLQFADRSIVKPKEKVEDILVKADKFYF
        MI   SFT+P SI  MDL+RALC+LG SINLM LSIFKK+EI  VQPTHM LQF DRSI KPK K ED+LVK DKF F
Subjt:  MIYSESFTVPYSISRMDLSRALCDLGASINLMHLSIFKKVEIGEVQPTHMRLQFADRSIVKPKEKVEDILVKADKFYF

XP_008447648.1 PREDICTED: uncharacterized protein LOC103490055 [Cucumis melo]8.00e-2870.51Show/hide
Query:  MIYSESFTVPYSISRMDLSRALCDLGASINLMHLSIFKKVEIGEVQPTHMRLQFADRSIVKPKEKVEDILVKADKFYF
        M Y  SF VP SI  MDL   LCDLGASINLM LSIFKK++I EVQPTHMR Q ADRSI  PK K+ED+LVK DKF F
Subjt:  MIYSESFTVPYSISRMDLSRALCDLGASINLMHLSIFKKVEIGEVQPTHMRLQFADRSIVKPKEKVEDILVKADKFYF

XP_008465121.1 PREDICTED: uncharacterized protein LOC103502805 [Cucumis melo]2.12e-2774.32Show/hide
Query:  ESFTVPYSISRMDLSRALCDLGASINLMHLSIFKKVEIGEVQPTHMRLQFADRSIVKPKEKVEDILVKADKFYF
         SFTVP SI+ MDL   LCDLGASINLM LSIFKK+EI EVQP HMRLQF DRSI K + K+EDILVK DKF F
Subjt:  ESFTVPYSISRMDLSRALCDLGASINLMHLSIFKKVEIGEVQPTHMRLQFADRSIVKPKEKVEDILVKADKFYF

TrEMBL top hitse value%identityAlignment
A0A1S3BHX3 uncharacterized protein LOC1034900551.3e-2070.51Show/hide
Query:  MIYSESFTVPYSISRMDLSRALCDLGASINLMHLSIFKKVEIGEVQPTHMRLQFADRSIVKPKEKVEDILVKADKFYF
        M Y  SF VP SI  MDL   LCDLGASINLM LSIFKK++I EVQPTHMR Q ADRSI  PK K+ED+LVK DKF F
Subjt:  MIYSESFTVPYSISRMDLSRALCDLGASINLMHLSIFKKVEIGEVQPTHMRLQFADRSIVKPKEKVEDILVKADKFYF

A0A5A7VJ95 Uncharacterized protein2.1e-2075.34Show/hide
Query:  SFTVPYSISRMDLSRALCDLGASINLMHLSIFKKVEIGEVQPTHMRLQFADRSIVKPKEKVEDILVKADKFYF
        SFTVP SI+ MDL   LCDLGASINLM LSIFKK+EI EVQP HMRLQF DRSI K + K+EDILVK DKF F
Subjt:  SFTVPYSISRMDLSRALCDLGASINLMHLSIFKKVEIGEVQPTHMRLQFADRSIVKPKEKVEDILVKADKFYF

A0A5D3BDT2 RT_RNaseH domain-containing protein1.3e-2070.51Show/hide
Query:  MIYSESFTVPYSISRMDLSRALCDLGASINLMHLSIFKKVEIGEVQPTHMRLQFADRSIVKPKEKVEDILVKADKFYF
        M Y  SF VP SI  MDL   LCDLGASINLM LSIFKK++I EVQPTHMR Q ADRSI  PK K+ED+LVK DKF F
Subjt:  MIYSESFTVPYSISRMDLSRALCDLGASINLMHLSIFKKVEIGEVQPTHMRLQFADRSIVKPKEKVEDILVKADKFYF

A0A5D3CC26 Uncharacterized protein1.2e-52100Show/hide
Query:  MIYSESFTVPYSISRMDLSRALCDLGASINLMHLSIFKKVEIGEVQPTHMRLQFADRSIVKPKEKVEDILVKADKFYFSQTSSFWTTKLTERYLSSWGGH
        MIYSESFTVPYSISRMDLSRALCDLGASINLMHLSIFKKVEIGEVQPTHMRLQFADRSIVKPKEKVEDILVKADKFYFSQTSSFWTTKLTERYLSSWGGH
Subjt:  MIYSESFTVPYSISRMDLSRALCDLGASINLMHLSIFKKVEIGEVQPTHMRLQFADRSIVKPKEKVEDILVKADKFYFSQTSSFWTTKLTERYLSSWGGH

Query:  SFQLVTSS
        SFQLVTSS
Subjt:  SFQLVTSS

A0A5D3DQ91 RT_RNaseH_2 domain-containing protein1.6e-2071.79Show/hide
Query:  MIYSESFTVPYSISRMDLSRALCDLGASINLMHLSIFKKVEIGEVQPTHMRLQFADRSIVKPKEKVEDILVKADKFYF
        MI   SFT+P SI  MDL+RALC+LG SINLM LSIFKK+EI  VQPTHM LQF DRSI KPK K ED+LVK DKF F
Subjt:  MIYSESFTVPYSISRMDLSRALCDLGASINLMHLSIFKKVEIGEVQPTHMRLQFADRSIVKPKEKVEDILVKADKFYF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATATACTCTGAAAGCTTTACGGTACCTTACTCGATTAGTCGAATGGATCTAAGTCGTGCTCTATGTGACTTGGGAGCAAGCATTAATTTGATGCACCTTTCTATATT
CAAGAAGGTGGAGATAGGGGAGGTGCAACCAACTCATATGAGACTCCAATTTGCTGACAGATCCATTGTCAAACCTAAGGAAAAAGTTGAAGACATTCTAGTTAAGGCGG
ACAAATTTTATTTCTCGCAGACTTCGTCATTCTGGACTACGAAGCTTACTGAGAGGTACCTATCATCTTGGGGCGGCCATTCCTTTCAACTGGTTACATCCTCATAA
mRNA sequenceShow/hide mRNA sequence
ATGATATACTCTGAAAGCTTTACGGTACCTTACTCGATTAGTCGAATGGATCTAAGTCGTGCTCTATGTGACTTGGGAGCAAGCATTAATTTGATGCACCTTTCTATATT
CAAGAAGGTGGAGATAGGGGAGGTGCAACCAACTCATATGAGACTCCAATTTGCTGACAGATCCATTGTCAAACCTAAGGAAAAAGTTGAAGACATTCTAGTTAAGGCGG
ACAAATTTTATTTCTCGCAGACTTCGTCATTCTGGACTACGAAGCTTACTGAGAGGTACCTATCATCTTGGGGCGGCCATTCCTTTCAACTGGTTACATCCTCATAA
Protein sequenceShow/hide protein sequence
MIYSESFTVPYSISRMDLSRALCDLGASINLMHLSIFKKVEIGEVQPTHMRLQFADRSIVKPKEKVEDILVKADKFYFSQTSSFWTTKLTERYLSSWGGHSFQLVTSS