CuGenDBv2

Gene ID	IVF0000835
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Non-structural maintenance of chromosomes element 1 homolog
Genome location	chr05:278836..283194
RNA-Seq Expression	IVF0000835
Synteny	IVF0000835
Gene Ontology terms	GO:0000724 - double-strand break repair via homologous recombination (biological process) GO:0006301 - postreplication repair (biological process) GO:0005634 - nucleus (cellular component) GO:0030915 - Smc5-Smc6 complex (cellular component) GO:0004842 - ubiquitin-protein transferase activity (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR011513 - Non-structural maintenance of chromosomes element 1 IPR013083 - Zinc finger, RING/FYVE/PHD-type IPR014857 - Zinc finger, RING-like IPR036388 - Winged helix-like DNA-binding domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAE8649414.1 hypothetical protein Csa_021680 [Cucumis sativus]

8.30e-197

84.46

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Query:  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKRITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAF
        MPELSWRHHTLIQSLLSRGPLREDQFHLLFK+ITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIA 
Subjt:  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKRITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAF

Query:  FKAIVEAIAQDPSAQGGISNISALNLQLENQLGDTG-----------------------------PQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTP
        FKAIVEAIAQD SAQGGISNISALNLQLENQ  D                               P    +PAAFKNFSKSHKEKTIAELAQDKWLDCTP
Subjt:  FKAIVEAIAQDPSAQGGISNISALNLQLENQLGDTG-----------------------------PQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTP

Query:  EGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCSSEVCTVRVHRYCLKKMLSNKKSKRACPGCGTRWQSTMSNIESKEEVDEPDTRTQDQPSSH
        +GFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCS+EVCTVRVH+YCLKKMLSNKKSK+ACPGCGTRWQST SNIE KEE DEPDTRTQDQPSSH
Subjt:  EGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCSSEVCTVRVHRYCLKKMLSNKKSKRACPGCGTRWQSTMSNIESKEEVDEPDTRTQDQPSSH

Query:  KRKKSKLNVDIDLGPNEDSTAEASQPPPDTRRATRNSTRQR
        KRKKS+LNVDIDLGPNEDSTAEASQPPP TRR TR+S RQR
Subjt:  KRKKSKLNVDIDLGPNEDSTAEASQPPPDTRRATRNSTRQR

XP_008449859.1 PREDICTED: non-structural maintenance of chromosomes element 1 homolog [Cucumis melo]

9.64e-226

100

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Query:  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKRITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAF
        MPELSWRHHTLIQSLLSRGPLREDQFHLLFKRITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAF
Subjt:  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKRITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAF

Query:  FKAIVEAIAQDPSAQGGISNISALNLQLENQLGDTGPQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPEGFVNLGVRSFLDLRSWFRSNDVPSCEVC
        FKAIVEAIAQDPSAQGGISNISALNLQLENQLGDTGPQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPEGFVNLGVRSFLDLRSWFRSNDVPSCEVC
Subjt:  FKAIVEAIAQDPSAQGGISNISALNLQLENQLGDTGPQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPEGFVNLGVRSFLDLRSWFRSNDVPSCEVC

Query:  NEAGVKAELCSSEVCTVRVHRYCLKKMLSNKKSKRACPGCGTRWQSTMSNIESKEEVDEPDTRTQDQPSSHKRKKSKLNVDIDLGPNEDSTAEASQPPPD
        NEAGVKAELCSSEVCTVRVHRYCLKKMLSNKKSKRACPGCGTRWQSTMSNIESKEEVDEPDTRTQDQPSSHKRKKSKLNVDIDLGPNEDSTAEASQPPPD
Subjt:  NEAGVKAELCSSEVCTVRVHRYCLKKMLSNKKSKRACPGCGTRWQSTMSNIESKEEVDEPDTRTQDQPSSHKRKKSKLNVDIDLGPNEDSTAEASQPPPD

Query:  TRRATRNSTRQR
        TRRATRNSTRQR
Subjt:  TRRATRNSTRQR

XP_031740711.1 non-structural maintenance of chromosomes element 1 homolog [Cucumis sativus]

2.56e-198

84.46

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Query:  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKRITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAF
        MPELSWRHHTLIQSLLSRGPLREDQFHLLFK+ITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIA 
Subjt:  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKRITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAF

Query:  FKAIVEAIAQDPSAQGGISNISALNLQLENQLGDTG-----------------------------PQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTP
        FKAIVEAIAQD SAQGGISNISALNLQLENQ  D                               P    +PAAFKNFSKSHKEKTIAELAQDKWLDCTP
Subjt:  FKAIVEAIAQDPSAQGGISNISALNLQLENQLGDTG-----------------------------PQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTP

Query:  EGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCSSEVCTVRVHRYCLKKMLSNKKSKRACPGCGTRWQSTMSNIESKEEVDEPDTRTQDQPSSH
        +GFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCS+EVCTVRVH+YCLKKMLSNKKSK+ACPGCGTRWQST SNIE KEE DEPDTRTQDQPSSH
Subjt:  EGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCSSEVCTVRVHRYCLKKMLSNKKSKRACPGCGTRWQSTMSNIESKEEVDEPDTRTQDQPSSH

Query:  KRKKSKLNVDIDLGPNEDSTAEASQPPPDTRRATRNSTRQR
        KRKKS+LNVDIDLGPNEDSTAEASQPPP TRR TR+S RQR
Subjt:  KRKKSKLNVDIDLGPNEDSTAEASQPPPDTRRATRNSTRQR

XP_038900598.1 non-structural maintenance of chromosomes element 1 homolog isoform X1 [Benincasa hispida]

2.69e-196

88.46

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Query:  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKRITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAF
        MPELSWRHHTLIQ+LL+RGPLRED FHLLF RITGKTPDNDQQ+FNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSD+QSKLGTKYSVPQIAF
Subjt:  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKRITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAF

Query:  FKAIVEAIAQDPSAQGGISNISALNLQLENQLGDTGPQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPEGFVNLGVRSFLDLRSWFRSNDVPSCEVC
        +KAIVEAIAQDPSAQGGISNISALNLQLENQ+GDTG QSQVIPAAFKNFS S KEKTIAELAQDKWL C+P+GFVNLGVRSFLDLRSWFRSNDVPSCEVC
Subjt:  FKAIVEAIAQDPSAQGGISNISALNLQLENQLGDTGPQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPEGFVNLGVRSFLDLRSWFRSNDVPSCEVC

Query:  NEAGVKAELCSSEVCTVRVHRYCLKKMLSNKKSKRACPGCGTRWQSTMSNIESKEEVDEPDTRTQDQPSSHKRKKSKLNVDIDLGPNEDSTAEASQPPPD
        NEAGVKAELC++E CTVRVHRYCLKKMLSNKKSKRACPGCG +W+ST SNIES+EE DEPDT TQDQPSSHKRKKS+LN+DIDLG NED  AEA QPP  
Subjt:  NEAGVKAELCSSEVCTVRVHRYCLKKMLSNKKSKRACPGCGTRWQSTMSNIESKEEVDEPDTRTQDQPSSHKRKKSKLNVDIDLGPNEDSTAEASQPPPD

Query:  TRRATRNSTRQR
        +RRATR S R R
Subjt:  TRRATRNSTRQR

XP_038900599.1 non-structural maintenance of chromosomes element 1 homolog isoform X2 [Benincasa hispida]

1.20e-196

88.46

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Query:  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKRITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAF
        MPELSWRHHTLIQ+LL+RGPLRED FHLLF RITGKTPDNDQQ+FNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSD+QSKLGTKYSVPQIAF
Subjt:  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKRITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAF

Query:  FKAIVEAIAQDPSAQGGISNISALNLQLENQLGDTGPQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPEGFVNLGVRSFLDLRSWFRSNDVPSCEVC
        +KAIVEAIAQDPSAQGGISNISALNLQLENQ+GDTG QSQVIPAAFKNFS S KEKTIAELAQDKWL C+P+GFVNLGVRSFLDLRSWFRSNDVPSCEVC
Subjt:  FKAIVEAIAQDPSAQGGISNISALNLQLENQLGDTGPQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPEGFVNLGVRSFLDLRSWFRSNDVPSCEVC

Query:  NEAGVKAELCSSEVCTVRVHRYCLKKMLSNKKSKRACPGCGTRWQSTMSNIESKEEVDEPDTRTQDQPSSHKRKKSKLNVDIDLGPNEDSTAEASQPPPD
        NEAGVKAELC++E CTVRVHRYCLKKMLSNKKSKRACPGCG +W+ST SNIES+EE DEPDT TQDQPSSHKRKKS+LN+DIDLG NED  AEA QPP  
Subjt:  NEAGVKAELCSSEVCTVRVHRYCLKKMLSNKKSKRACPGCGTRWQSTMSNIESKEEVDEPDTRTQDQPSSHKRKKSKLNVDIDLGPNEDSTAEASQPPPD

Query:  TRRATRNSTRQR
        +RRATR S R R
Subjt:  TRRATRNSTRQR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KZ19 Non-structural maintenance of chromosomes element 1 homolog

1.7e-166

94.87

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Query:  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKRITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAF
        MPELSWRHHTLIQSLLSRGPLREDQFHLLFK+ITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIA 
Subjt:  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKRITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAF

Query:  FKAIVEAIAQDPSAQGGISNISALNLQLENQLGDTGPQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPEGFVNLGVRSFLDLRSWFRSNDVPSCEVC
        FKAIVEAIAQD SAQGGISNISALNLQLENQLGDTG QSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTP+GFVNLGVRSFLDLRSWFRSNDVPSCEVC
Subjt:  FKAIVEAIAQDPSAQGGISNISALNLQLENQLGDTGPQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPEGFVNLGVRSFLDLRSWFRSNDVPSCEVC

Query:  NEAGVKAELCSSEVCTVRVHRYCLKKMLSNKKSKRACPGCGTRWQSTMSNIESKEEVDEPDTRTQDQPSSHKRKKSKLNVDIDLGPNEDSTAEASQPPPD
        NEAGVKAELCS+EVCTVRVH+YCLKKMLSNKKSK+ACPGCGTRWQST SNIE KEE DEPDTRTQDQPSSHKRKKS+LNVDIDLGPNEDSTAEASQPPP 
Subjt:  NEAGVKAELCSSEVCTVRVHRYCLKKMLSNKKSKRACPGCGTRWQSTMSNIESKEEVDEPDTRTQDQPSSHKRKKSKLNVDIDLGPNEDSTAEASQPPPD

Query:  TRRATRNSTRQR
        TRR TR+S RQR
Subjt:  TRRATRNSTRQR

A0A1S3BMD8 Non-structural maintenance of chromosomes element 1 homolog

6.1e-177

100

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Query:  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKRITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAF
        MPELSWRHHTLIQSLLSRGPLREDQFHLLFKRITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAF
Subjt:  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKRITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAF

Query:  FKAIVEAIAQDPSAQGGISNISALNLQLENQLGDTGPQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPEGFVNLGVRSFLDLRSWFRSNDVPSCEVC
        FKAIVEAIAQDPSAQGGISNISALNLQLENQLGDTGPQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPEGFVNLGVRSFLDLRSWFRSNDVPSCEVC
Subjt:  FKAIVEAIAQDPSAQGGISNISALNLQLENQLGDTGPQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPEGFVNLGVRSFLDLRSWFRSNDVPSCEVC

Query:  NEAGVKAELCSSEVCTVRVHRYCLKKMLSNKKSKRACPGCGTRWQSTMSNIESKEEVDEPDTRTQDQPSSHKRKKSKLNVDIDLGPNEDSTAEASQPPPD
        NEAGVKAELCSSEVCTVRVHRYCLKKMLSNKKSKRACPGCGTRWQSTMSNIESKEEVDEPDTRTQDQPSSHKRKKSKLNVDIDLGPNEDSTAEASQPPPD
Subjt:  NEAGVKAELCSSEVCTVRVHRYCLKKMLSNKKSKRACPGCGTRWQSTMSNIESKEEVDEPDTRTQDQPSSHKRKKSKLNVDIDLGPNEDSTAEASQPPPD

Query:  TRRATRNSTRQR
        TRRATRNSTRQR
Subjt:  TRRATRNSTRQR

A0A6J1DI86 Non-structural maintenance of chromosomes element 1 homolog

8.1e-145

82.43

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Query:  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKRITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAF
        M ELSWRHHTLIQ+LL+RGPLREDQFHL+F RITGK+PDNDQQ+FN+YLL INKALSFAQFELRGCRNQYDGRVYYGLVNNVSD+QSKLGTKYSVPQIAF
Subjt:  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKRITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAF

Query:  FKAIVEAIAQDPSAQGGISNISALNLQLENQLGDTGPQ-SQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPEGFVNLGVRSFLDLRSWFRSNDVPSCEV
        +KAIVEAIAQDPSAQGGISNI+AL+LQLENQLGD G Q SQVIP AFKNFS S KEKTIAELAQD+WL+CTP+GFVNLGVRSFLDLRSWFR+ND+PSCEV
Subjt:  FKAIVEAIAQDPSAQGGISNISALNLQLENQLGDTGPQ-SQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPEGFVNLGVRSFLDLRSWFRSNDVPSCEV

Query:  CNEAGVKAELCSSEVCTVRVHRYCLKKMLSNKKSKRACPGCGTRWQSTMSNIESKEEVDEPDTRTQDQPSSHKRKKSKLNVDIDLGPNEDSTAEASQPPP
        CNEAGVKAELC +E CTVRVH+YCLKKMLSNKKSKRACPGCGT+W+ST++N+ESKEE DEPD RTQ Q SS +RKKS+LN+D+D   ++ + A ASQPPP
Subjt:  CNEAGVKAELCSSEVCTVRVHRYCLKKMLSNKKSKRACPGCGTRWQSTMSNIESKEEVDEPDTRTQDQPSSHKRKKSKLNVDIDLGPNEDSTAEASQPPP

Query:  DTRRATRNSTRQR
        +TRR TR+S RQR
Subjt:  DTRRATRNSTRQR

A0A6J1JYV1 Non-structural maintenance of chromosomes element 1 homolog

3.3e-146

83.12

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Query:  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKRITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAF
        M ELSWRHHTLIQ+LL+RGPLRED FHLLF RIT K+PDND+Q+FN+YLLT+NKALSFAQFELRGCRNQYDGRVYYGLVNNVSD+QSKLGTKYSVPQIAF
Subjt:  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKRITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAF

Query:  FKAIVEAIAQDPSAQGGISNISALNLQLENQLGDTGPQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPEGFVNLGVRSFLDLRSWFRSNDVPSCEVC
        +KAIVEAIAQDPSAQGGISNI+AL+LQLENQLGD G QS VIP AFKNFS S KEKTIAELAQD+WL+CTP+GFVNLGVRSFLDLRSWFR+ND+PSCEVC
Subjt:  FKAIVEAIAQDPSAQGGISNISALNLQLENQLGDTGPQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPEGFVNLGVRSFLDLRSWFRSNDVPSCEVC

Query:  NEAGVKAELCSSEVCTVRVHRYCLKKMLSNKKSKRACPGCGTRWQSTMSNIESKEEVDEPDTRTQDQPSSHKRKKSKLNVDIDLGPNEDS--TAEASQPP
        NEAGVKAELCS+E CTVRVHRYCLKKMLSNKKSKRACP CGT+W+ST  N+E KEE DEPD R Q Q SSHKRKK++LN DID GPN DS   A+ASQPP
Subjt:  NEAGVKAELCSSEVCTVRVHRYCLKKMLSNKKSKRACPGCGTRWQSTMSNIESKEEVDEPDTRTQDQPSSHKRKKSKLNVDIDLGPNEDS--TAEASQPP

Query:  PDTRRATRNSTRQR
        PDTRR TR+S  QR
Subjt:  PDTRRATRNSTRQR

A0A6J1K5P2 Non-structural maintenance of chromosomes element 1 homolog

3.3e-146

83.12

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Query:  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKRITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAF
        M ELSWRHHTLIQ+LL+RGPLRED FHLLF RIT K+PDND+Q+FN+YLLT+NKALSFAQFELRGCRNQYDGRVYYGLVNNVSD+QSKLGTKYSVPQIAF
Subjt:  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKRITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAF

Query:  FKAIVEAIAQDPSAQGGISNISALNLQLENQLGDTGPQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPEGFVNLGVRSFLDLRSWFRSNDVPSCEVC
        +KAIVEAIAQDPSAQGGISNI+AL+LQLENQLGD G QS VIP AFKNFS S KEKTIAELAQD+WL+CTP+GFVNLGVRSFLDLRSWFR+ND+PSCEVC
Subjt:  FKAIVEAIAQDPSAQGGISNISALNLQLENQLGDTGPQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPEGFVNLGVRSFLDLRSWFRSNDVPSCEVC

Query:  NEAGVKAELCSSEVCTVRVHRYCLKKMLSNKKSKRACPGCGTRWQSTMSNIESKEEVDEPDTRTQDQPSSHKRKKSKLNVDIDLGPNEDS--TAEASQPP
        NEAGVKAELCS+E CTVRVHRYCLKKMLSNKKSKRACP CGT+W+ST  N+E KEE DEPD R Q Q SSHKRKK++LN DID GPN DS   A+ASQPP
Subjt:  NEAGVKAELCSSEVCTVRVHRYCLKKMLSNKKSKRACPGCGTRWQSTMSNIESKEEVDEPDTRTQDQPSSHKRKKSKLNVDIDLGPNEDS--TAEASQPP

Query:  PDTRRATRNSTRQR
        PDTRR TR+S  QR
Subjt:  PDTRRATRNSTRQR

SwissProt top hits

e value

%identity

Alignment

Q6P881 Non-structural maintenance of chromosomes element 1 homolog

4.7e-09

22.58

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Query:  ELSWRHHTLIQSLLSRGPLREDQFHLLFKRITGKTPDN-DQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAFF
        +++  H   +Q L+S G +       L +        N      + ++  +NK L     ++     + DG  YY LVN V +D +K+ + Y+  ++  F
Subjt:  ELSWRHHTLIQSLLSRGPLREDQFHLLFKRITGKTPDN-DQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAFF

Query:  KAIVEAIAQDPSAQGGISNISALNLQLENQLGDTGPQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPEGFVNLGVRSFLDLRSWFRS--NDVPS-CE
        +  +E I    S  G    IS LNL  E Q               K   K   E+ +    QDKWL     G   L  R  ++L  +  +   DV   C 
Subjt:  KAIVEAIAQDPSAQGGISNISALNLQLENQLGDTGPQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPEGFVNLGVRSFLDLRSWFRS--NDVPS-CE

Query:  VCNEAGVKAELCSSEVCTVRVHRYCLKKMLSNKKSKRACPGCGTRWQSTMSNIESKEEVDEPDTRTQDQPSSHKRKKSK
        VC++  ++ +LC  E C + +H  C   +     +   CP C   W   + ++   +   +  + +Q  P   + ++S+
Subjt:  VCNEAGVKAELCSSEVCTVRVHRYCLKKMLSNKKSKRACPGCGTRWQSTMSNIESKEEVDEPDTRTQDQPSSHKRKKSK

Q6PAF4 Non-structural maintenance of chromosomes element 1 homolog

1.7e-11

26.32

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Query:  DGRVYYGLVNNVSDDQSKLGTKYSVPQIAFFKAIVEAIAQDPSAQGGISNISALNLQLENQLGDTGPQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCT
        DG  YY LVN V +D +K+ + Y+  ++  F+  +E I    S  G  ++IS LNL  E Q               K   K   E+ +    Q+KWL   
Subjt:  DGRVYYGLVNNVSDDQSKLGTKYSVPQIAFFKAIVEAIAQDPSAQGGISNISALNLQLENQLGDTGPQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCT

Query:  PEGFVNLGVRSFLDLRSWFRS--NDVPS-CEVCNEAGVKAELCSSEVCTVRVHRYCLKKMLSNKKSKRACPGCGTRWQSTMSNIESKEEVDEPDTRTQDQ
          G   L  R  ++L  + R+   DV   C VC +  ++++LC  E C + +H  C  K   + K+   CP C   W   + ++          ++T+  
Subjt:  PEGFVNLGVRSFLDLRSWFRS--NDVPS-CEVCNEAGVKAELCSSEVCTVRVHRYCLKKMLSNKKSKRACPGCGTRWQSTMSNIESKEEVDEPDTRTQDQ

Query:  PSSHKRKKS
           ++R K+
Subjt:  PSSHKRKKS

Arabidopsis top hits

e value

%identity

Alignment

AT5G21140.1 embryo defective 1379

3.5e-92

56.15

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Query:  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKRITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAF
        M  LSW+HHTLIQ+L+SRGPL+E +FH +F  +TG+ P   +++F+ YLL INK LS+  FEL+ CR+QYDG+V YG+VNNV+DDQSKLGTKYSVPQIAF
Subjt:  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKRITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAF

Query:  FKAIVEAIAQDPSAQGGISNISALNLQLENQLGDTGPQS-QVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPEGFVNLGVRSFLDLRSWFRSNDVPSCEV
        FK I+EAIAQD +AQG IS+  ALN++LENQ+      S Q +P AFKNFS + KEKT+ EL +DKWL  T E  + LG+RS LDLRSWFR+NDVPSCEV
Subjt:  FKAIVEAIAQDPSAQGGISNISALNLQLENQLGDTGPQS-QVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPEGFVNLGVRSFLDLRSWFRSNDVPSCEV

Query:  CNEAGVKAELCSSEVCTVRVHRYCLKKMLSNKKSKRACPGCGTRWQ-STMSNIESKEEV--DEPDTRTQDQPSSHKRKKSKLNVDIDLGPNEDSTAE-AS
        CNEAGVKA+LC +E C VR+H+YCLKK+LS +  KR C GCG  W  S ++  E+ EE   DE ++ TQ      KR++ +     D   N  S A  AS
Subjt:  CNEAGVKAELCSSEVCTVRVHRYCLKKMLSNKKSKRACPGCGTRWQ-STMSNIESKEEV--DEPDTRTQDQPSSHKRKKSKLNVDIDLGPNEDSTAE-AS

Query:  QPPPDTRRATRNSTRQR
            +TRR TR+    R
Subjt:  QPPPDTRRATRNSTRQR

Sequences

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CDS sequence

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ATGCCAGAACTGAGTTGGAGACATCACACTCTCATTCAATCGCTACTCTCTCGCGGCCCTCTCAGAGAGGATCAGTTTCATTTGCTGTTCAAGCGAATCACTGGAAAGAC
TCCAGATAATGACCAGCAGGTTTTTAATAGTTACCTCCTGACTATAAATAAAGCACTTTCTTTTGCTCAGTTTGAGTTGAGAGGCTGCAGAAACCAATATGATGGACGTG
TTTACTATGGCTTGGTAAATAATGTATCTGACGACCAATCCAAGCTAGGAACAAAGTATTCAGTTCCACAGATTGCCTTTTTTAAAGCCATCGTTGAAGCAATTGCACAA
GATCCATCTGCTCAAGGTGGAATATCAAATATTTCTGCTCTTAATCTGCAGCTGGAAAATCAGCTGGGGGATACAGGGCCCCAGTCCCAAGTCATACCAGCTGCTTTCAA
GAATTTCTCAAAATCTCACAAGGAAAAAACAATTGCCGAGCTTGCTCAGGATAAGTGGCTTGATTGCACCCCTGAAGGCTTCGTAAATTTGGGCGTCCGATCGTTTCTTG
ATTTGCGAAGTTGGTTCCGCAGCAATGACGTACCTTCATGTGAAGTGTGCAATGAAGCTGGTGTGAAGGCAGAGTTGTGTAGTAGTGAAGTTTGCACCGTCCGTGTCCAT
CGGTATTGCCTTAAGAAAATGTTATCCAATAAAAAGAGTAAAAGGGCCTGTCCAGGTTGTGGCACTCGATGGCAATCTACAATGTCCAACATAGAGTCCAAGGAGGAAGT
GGATGAGCCGGATACACGCACCCAAGATCAACCATCATCACATAAGAGGAAGAAATCCAAGTTGAACGTAGATATTGATTTAGGACCAAACGAAGACAGTACTGCAGAAG
CTTCCCAACCTCCTCCAGATACAAGGAGAGCAACACGAAATTCTACACGCCAGCGGTAG

mRNA sequence

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TGAGATTAGAGAGGGAGGGGGCGATATTTCCCGCCGTTTTGAAAGAGGATGATATCCTTCCCCAAACTTCAGTGAACTGCCGGCTAACTCTCTCACAATTTTCCTCACAA
ACTCACTTCTTCTCTTCTAAACTTTTGCTCCAATTGAAGAACCCTTGTTTGAATTATTTTTTCCTTTTTCATTTTCTTTTGAACATTTAGTTGTTTCTGAATTAGGGTTC
ACAATGCCAGAACTGAGTTGGAGACATCACACTCTCATTCAATCGCTACTCTCTCGCGGCCCTCTCAGAGAGGATCAGTTTCATTTGCTGTTCAAGCGAATCACTGGAAA
GACTCCAGATAATGACCAGCAGGTTTTTAATAGTTACCTCCTGACTATAAATAAAGCACTTTCTTTTGCTCAGTTTGAGTTGAGAGGCTGCAGAAACCAATATGATGGAC
GTGTTTACTATGGCTTGGTAAATAATGTATCTGACGACCAATCCAAGCTAGGAACAAAGTATTCAGTTCCACAGATTGCCTTTTTTAAAGCCATCGTTGAAGCAATTGCA
CAAGATCCATCTGCTCAAGGTGGAATATCAAATATTTCTGCTCTTAATCTGCAGCTGGAAAATCAGCTGGGGGATACAGGGCCCCAGTCCCAAGTCATACCAGCTGCTTT
CAAGAATTTCTCAAAATCTCACAAGGAAAAAACAATTGCCGAGCTTGCTCAGGATAAGTGGCTTGATTGCACCCCTGAAGGCTTCGTAAATTTGGGCGTCCGATCGTTTC
TTGATTTGCGAAGTTGGTTCCGCAGCAATGACGTACCTTCATGTGAAGTGTGCAATGAAGCTGGTGTGAAGGCAGAGTTGTGTAGTAGTGAAGTTTGCACCGTCCGTGTC
CATCGGTATTGCCTTAAGAAAATGTTATCCAATAAAAAGAGTAAAAGGGCCTGTCCAGGTTGTGGCACTCGATGGCAATCTACAATGTCCAACATAGAGTCCAAGGAGGA
AGTGGATGAGCCGGATACACGCACCCAAGATCAACCATCATCACATAAGAGGAAGAAATCCAAGTTGAACGTAGATATTGATTTAGGACCAAACGAAGACAGTACTGCAG
AAGCTTCCCAACCTCCTCCAGATACAAGGAGAGCAACACGAAATTCTACACGCCAGCGGTAGGTCTTGGAATGAGGTACTGTTAATTTAATACCGTTTCATGGATCCTAT
TATTAGTTTAGGAGTTGTAAAGTGTGCAACAACTGCACTTTTTGATGTCGTGTGTCAAAATTGTCACCCTATTTAGATTTATTTGAAGTGTCATTTTAAAATCTTTATAC
CCAGAACCGGAATGCAAAGTGCATTACGCTACGTAAGCCAGAAGTAGAAGTTTTTTTTTTTACCTCCCCTAAACTGTAGCTTTGGTTCTCCTTTATGTTCTCTATAAATG
CAAGG

Protein sequence

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MPELSWRHHTLIQSLLSRGPLREDQFHLLFKRITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAFFKAIVEAIAQ
DPSAQGGISNISALNLQLENQLGDTGPQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPEGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCSSEVCTVRVH
RYCLKKMLSNKKSKRACPGCGTRWQSTMSNIESKEEVDEPDTRTQDQPSSHKRKKSKLNVDIDLGPNEDSTAEASQPPPDTRRATRNSTRQR

IVF0000835 (gene) of Melon (IVF77) v1 genome