; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0000839 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0000839
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRibosomal protein S24/S35, mitochondrial
Genome locationchr12:24545694..24547174
RNA-Seq ExpressionIVF0000839
SyntenyIVF0000839
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584340.1 hypothetical protein SDJN03_20272, partial [Cucurbita argyrosperma subsp. sororia]2.96e-5363.19Show/hide
Query:  MKRALWGAVFNVCSRTLSVSPPLRTFRSVPLLSPFSVFTL---RCYSSGNDKYNELNSTKTRTLSSTT---MSAQKLKRKIDKFYEGGDADSLPEIFEAI
        MKRA+WGAVF  CSR +S+SP L+T RS PLL  FSV      RCYSSGNDKYN LNST      S     +S ++LKRKID+FYEG D +SLP IFEAI
Subjt:  MKRALWGAVFNVCSRTLSVSPPLRTFRSVPLLSPFSVFTL---RCYSSGNDKYNELNSTKTRTLSSTT---MSAQKLKRKIDKFYEGGDADSLPEIFEAI

Query:  LKRKLSGKHEDADDELMKEIRQRMPGEIEDFKGEEYDSELTDDA--------ASDSEEEDKRI
        LKRKLSGKH DADDELMKEIRQRMPGE+EDFK EEYDS+L+ +            SEEED+R+
Subjt:  LKRKLSGKHEDADDELMKEIRQRMPGEIEDFKGEEYDSELTDDA--------ASDSEEEDKRI

XP_004137486.1 uncharacterized protein LOC101216147 [Cucumis sativus]2.61e-7179.35Show/hide
Query:  MKRALWGAVFNVCSRTLSVSPPLRTFRSVPLLSPFSVFTLRCYSSGNDKYNELNSTKTR-TLSSTTMSAQKLKRKIDKFYEGGDADSLPEIFEAILKRKL
        MKRALWGAVF+V S TLSVSPPLRTFRS PLLSPFSV TLR YSSGNDKYNELNSTK + +L    +S ++LKRKIDKFYEGGDADSLP IFEAILKRKL
Subjt:  MKRALWGAVFNVCSRTLSVSPPLRTFRSVPLLSPFSVFTLRCYSSGNDKYNELNSTKTR-TLSSTTMSAQKLKRKIDKFYEGGDADSLPEIFEAILKRKL

Query:  SGKHEDADDELMKEIRQRMPGEIEDFKGEE-YDSELTDD----AASDSEEEDKRI
        SGKHEDADDELMKEIRQ++PGE+EDFKGEE YDS+L DD    A+ DSEEED+RI
Subjt:  SGKHEDADDELMKEIRQRMPGEIEDFKGEE-YDSELTDD----AASDSEEEDKRI

XP_008461340.1 PREDICTED: uncharacterized protein LOC103499929 [Cucumis melo]3.80e-8892Show/hide
Query:  MKRALWGAVFNVCSRTLSVSPPLRTFRSVPLLSPFSVFTLRCYSSGNDKYNELNSTKTR-TLSSTTMSAQKLKRKIDKFYEGGDADSLPEIFEAILKRKL
        MKRALWGAVFNVCSRTLSVSPPLRTFRSVPLLSPFSVFTLRCYSSGNDKYNELNSTK + +L    +S ++LKRKIDKFYEGGDADSLPEIFEAILKRKL
Subjt:  MKRALWGAVFNVCSRTLSVSPPLRTFRSVPLLSPFSVFTLRCYSSGNDKYNELNSTKTR-TLSSTTMSAQKLKRKIDKFYEGGDADSLPEIFEAILKRKL

Query:  SGKHEDADDELMKEIRQRMPGEIEDFKGEEYDSELTDDAASDSEEEDKRI
        SGKHEDADDELMKEIRQRMPGEIEDFKGEEYDSELTDDAASDSEEEDKRI
Subjt:  SGKHEDADDELMKEIRQRMPGEIEDFKGEEYDSELTDDAASDSEEEDKRI

XP_023519890.1 uncharacterized protein LOC111783221 [Cucurbita pepo subsp. pepo]3.13e-5565.03Show/hide
Query:  MKRALWGAVFNVCSRTLSVSPPLRTFRSVPLLSPFSVFTL---RCYSSGNDKYNELNSTKTRTLSSTT---MSAQKLKRKIDKFYEGGDADSLPEIFEAI
        MKRA+WGAVF VCSR +S+SP L+T RS PLL PFSV      RCYS+GNDKYN LNST      S     +S ++LKRKID+FYEG D +SLP IFEAI
Subjt:  MKRALWGAVFNVCSRTLSVSPPLRTFRSVPLLSPFSVFTL---RCYSSGNDKYNELNSTKTRTLSSTT---MSAQKLKRKIDKFYEGGDADSLPEIFEAI

Query:  LKRKLSGKHEDADDELMKEIRQRMPGEIEDFKGEEYDSEL------TDDAASD--SEEEDKRI
        LKRKLSGKH DADDELMKEIRQRMPGE+EDFK EEYDS+L      TD+   +  SEEED+R+
Subjt:  LKRKLSGKHEDADDELMKEIRQRMPGEIEDFKGEEYDSEL------TDDAASD--SEEEDKRI

XP_038894045.1 uncharacterized protein LOC120082798 [Benincasa hispida]2.30e-5968.32Show/hide
Query:  MKRALWGAVFNVCSRTLSVSPPLRTFRSVPLLSPFSVFTLRCYSSGNDKYNELNSTKTR-TLSSTTMSAQKLKRKIDKFYEGGDADSLPEIFEAILKRKL
        MKRAL GAVFNV SRTLSVSPPLRTFRS  LLSPFS F+LR YSSGNDKYN LNSTK + +L    +S ++LKRKIDKFYEG D +SLP IFEAILKRKL
Subjt:  MKRALWGAVFNVCSRTLSVSPPLRTFRSVPLLSPFSVFTLRCYSSGNDKYNELNSTKTR-TLSSTTMSAQKLKRKIDKFYEGGDADSLPEIFEAILKRKL

Query:  SGKHEDADDELMKEIRQRMPGEIEDFKGEEYDSELTD-----------DAASDSEEEDKRI
        SGKHED D E+MKEIRQRMPG++ED  GEEYDS+L++             +SDSE+ED+R+
Subjt:  SGKHEDADDELMKEIRQRMPGEIEDFKGEEYDSELTD-----------DAASDSEEEDKRI

TrEMBL top hitse value%identityAlignment
A0A0A0LT17 Uncharacterized protein8.2e-5579.35Show/hide
Query:  MKRALWGAVFNVCSRTLSVSPPLRTFRSVPLLSPFSVFTLRCYSSGNDKYNELNSTKTR-TLSSTTMSAQKLKRKIDKFYEGGDADSLPEIFEAILKRKL
        MKRALWGAVF+V S TLSVSPPLRTFRS PLLSPFSV TLR YSSGNDKYNELNSTK + +L    +S ++LKRKIDKFYEGGDADSLP IFEAILKRKL
Subjt:  MKRALWGAVFNVCSRTLSVSPPLRTFRSVPLLSPFSVFTLRCYSSGNDKYNELNSTKTR-TLSSTTMSAQKLKRKIDKFYEGGDADSLPEIFEAILKRKL

Query:  SGKHEDADDELMKEIRQRMPGEIEDFKG-EEYDSELTD----DAASDSEEEDKRI
        SGKHEDADDELMKEIRQ++PGE+EDFKG EEYDS+L D    DA+ DSEEED+RI
Subjt:  SGKHEDADDELMKEIRQRMPGEIEDFKG-EEYDSELTD----DAASDSEEEDKRI

A0A1S3CEX3 uncharacterized protein LOC1034999291.4e-6792Show/hide
Query:  MKRALWGAVFNVCSRTLSVSPPLRTFRSVPLLSPFSVFTLRCYSSGNDKYNELNSTKTR-TLSSTTMSAQKLKRKIDKFYEGGDADSLPEIFEAILKRKL
        MKRALWGAVFNVCSRTLSVSPPLRTFRSVPLLSPFSVFTLRCYSSGNDKYNELNSTK + +L    +S ++LKRKIDKFYEGGDADSLPEIFEAILKRKL
Subjt:  MKRALWGAVFNVCSRTLSVSPPLRTFRSVPLLSPFSVFTLRCYSSGNDKYNELNSTKTR-TLSSTTMSAQKLKRKIDKFYEGGDADSLPEIFEAILKRKL

Query:  SGKHEDADDELMKEIRQRMPGEIEDFKGEEYDSELTDDAASDSEEEDKRI
        SGKHEDADDELMKEIRQRMPGEIEDFKGEEYDSELTDDAASDSEEEDKRI
Subjt:  SGKHEDADDELMKEIRQRMPGEIEDFKGEEYDSELTDDAASDSEEEDKRI

A0A5D3BIA4 Uncharacterized protein1.4e-6792Show/hide
Query:  MKRALWGAVFNVCSRTLSVSPPLRTFRSVPLLSPFSVFTLRCYSSGNDKYNELNSTKTR-TLSSTTMSAQKLKRKIDKFYEGGDADSLPEIFEAILKRKL
        MKRALWGAVFNVCSRTLSVSPPLRTFRSVPLLSPFSVFTLRCYSSGNDKYNELNSTK + +L    +S ++LKRKIDKFYEGGDADSLPEIFEAILKRKL
Subjt:  MKRALWGAVFNVCSRTLSVSPPLRTFRSVPLLSPFSVFTLRCYSSGNDKYNELNSTKTR-TLSSTTMSAQKLKRKIDKFYEGGDADSLPEIFEAILKRKL

Query:  SGKHEDADDELMKEIRQRMPGEIEDFKGEEYDSELTDDAASDSEEEDKRI
        SGKHEDADDELMKEIRQRMPGEIEDFKGEEYDSELTDDAASDSEEEDKRI
Subjt:  SGKHEDADDELMKEIRQRMPGEIEDFKGEEYDSELTDDAASDSEEEDKRI

A0A6J1E804 uncharacterized protein LOC1114315721.2e-4062.58Show/hide
Query:  MKRALWGAVFNVCSRTLSVSPPLRTFRSVPLLSPFSV---FTLRCYSSGNDKYNELNSTKTR---TLSSTTMSAQKLKRKIDKFYEGGDADSLPEIFEAI
        MKRA+WGAVF  CSR +S+SP L+T RS PLL  FSV      RCYSSGNDKYN LNST      +L    +S ++LKRKID+FYE GD +SLP IFEAI
Subjt:  MKRALWGAVFNVCSRTLSVSPPLRTFRSVPLLSPFSV---FTLRCYSSGNDKYNELNSTKTR---TLSSTTMSAQKLKRKIDKFYEGGDADSLPEIFEAI

Query:  LKRKLSGKHEDADDELMKEIRQRMPGEIEDFKGEEYDSELTDD--------AASDSEEEDKRI
        LKRKLSGKH DADDELMKEIRQR+PGE+EDFK EEYDS+L+ +            SEEED+R+
Subjt:  LKRKLSGKHEDADDELMKEIRQRMPGEIEDFKGEEYDSELTDD--------AASDSEEEDKRI

A0A6J1KP40 uncharacterized protein LOC1114952365.7e-4064.71Show/hide
Query:  MKRALWGAVFNVCSRTLSVSPPLRTFRSVPLLSPFSV---FTLRCYSSGNDKYNELNSTKTRTLSSTT---MSAQKLKRKIDKFYEGGDADSLPEIFEAI
        MKRA+WGAVF  CSR +S+ P L+T RS PLL PFSV      RCYSSGNDKYN LNST      S     +S ++LKRKID+FYE GD +SLP IFEAI
Subjt:  MKRALWGAVFNVCSRTLSVSPPLRTFRSVPLLSPFSV---FTLRCYSSGNDKYNELNSTKTRTLSSTT---MSAQKLKRKIDKFYEGGDADSLPEIFEAI

Query:  LKRKLSGKHEDADDELMKEIRQRMPGEIEDFKGEEYDSELTDDAASDSEEEDK
        LKRKLSGKH DADDELMKEI QRMPGE+EDFK EEYDS+L+ D     EE ++
Subjt:  LKRKLSGKHEDADDELMKEIRQRMPGEIEDFKGEEYDSELTDDAASDSEEEDK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G73770.1 FUNCTIONS IN: molecular_function unknown4.7e-1038.27Show/hide
Query:  MSAQKLKRKIDKFYEGGDADSLPEIFEAILKRKLSGKHEDADDELMKEIRQRMPGEIEDFKGEEYDSELTDDAASDSEEED
        +S ++LK++I  F + G+ D++P++FEA++ RKLSGKH+D+DDE+M  +R+    +    K ++ DS++  D   DS + D
Subjt:  MSAQKLKRKIDKFYEGGDADSLPEIFEAILKRKLSGKHEDADDELMKEIRQRMPGEIEDFKGEEYDSELTDDAASDSEEED

AT1G73770.2 FUNCTIONS IN: molecular_function unknown4.7e-1038.27Show/hide
Query:  MSAQKLKRKIDKFYEGGDADSLPEIFEAILKRKLSGKHEDADDELMKEIRQRMPGEIEDFKGEEYDSELTDDAASDSEEED
        +S ++LK++I  F + G+ D++P++FEA++ RKLSGKH+D+DDE+M  +R+    +    K ++ DS++  D   DS + D
Subjt:  MSAQKLKRKIDKFYEGGDADSLPEIFEAILKRKLSGKHEDADDELMKEIRQRMPGEIEDFKGEEYDSELTDDAASDSEEED

AT3G18240.1 Ribosomal protein S24/S35, mitochondrial4.0e-0929.73Show/hide
Query:  NVCSRTLSVSPPL--RTFRSVPLLSPFSV-----FTLRCYSSGNDKYNELNSTKT-----RTLSSTTMSAQKLKRKIDKFYEGGDADSLPEIFEAILKRK
        ++C+R + +SP +  +   +VP L+P +      F      SG +      S+ T     + L    +S ++LK +I+K++  G+ D+LP + EA+L+R+
Subjt:  NVCSRTLSVSPPL--RTFRSVPLLSPFSV-----FTLRCYSSGNDKYNELNSTKT-----RTLSSTTMSAQKLKRKIDKFYEGGDADSLPEIFEAILKRK

Query:  LSGKHEDADDELMKEIRQRMPGEIEDFKGEEYDSELTDDAASDSEEED
        L  KH + DDEL+++I + +P + +D K E+++S+  +  ++D E ED
Subjt:  LSGKHEDADDELMKEIRQRMPGEIEDFKGEEYDSELTDDAASDSEEED

AT3G18240.2 Ribosomal protein S24/S35, mitochondrial4.0e-0929.73Show/hide
Query:  NVCSRTLSVSPPL--RTFRSVPLLSPFSV-----FTLRCYSSGNDKYNELNSTKT-----RTLSSTTMSAQKLKRKIDKFYEGGDADSLPEIFEAILKRK
        ++C+R + +SP +  +   +VP L+P +      F      SG +      S+ T     + L    +S ++LK +I+K++  G+ D+LP + EA+L+R+
Subjt:  NVCSRTLSVSPPL--RTFRSVPLLSPFSV-----FTLRCYSSGNDKYNELNSTKT-----RTLSSTTMSAQKLKRKIDKFYEGGDADSLPEIFEAILKRK

Query:  LSGKHEDADDELMKEIRQRMPGEIEDFKGEEYDSELTDDAASDSEEED
        L  KH + DDEL+++I + +P + +D K E+++S+  +  ++D E ED
Subjt:  LSGKHEDADDELMKEIRQRMPGEIEDFKGEEYDSELTDDAASDSEEED

AT4G21460.1 Ribosomal protein S24/S35, mitochondrial1.4e-0932.03Show/hide
Query:  GAVF---NVCSRTLSVSPPLRTFRSVPLLSPFSV-----FTLRCYSSGNDKYNELNSTKT-----RTLSSTTMSAQKLKRKIDKFYEGGDADSLPEIFEA
        GA+F   ++C+R + +S   R   +VP L+P +      F      SG +      S+ T     + L    +S ++LK +IDK +  G+ D+LP + EA
Subjt:  GAVF---NVCSRTLSVSPPLRTFRSVPLLSPFSV-----FTLRCYSSGNDKYNELNSTKT-----RTLSSTTMSAQKLKRKIDKFYEGGDADSLPEIFEA

Query:  ILKRKLSGKHEDADDELMKEIRQRMPGEIEDFKGEEYDSELTDDAASDSEEED
        +L+R+L  KH + DDELM++I + +P + +D K E+++S+  +  ++D E ED
Subjt:  ILKRKLSGKHEDADDELMKEIRQRMPGEIEDFKGEEYDSELTDDAASDSEEED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCGAGCTCTATGGGGAGCTGTCTTCAATGTCTGTTCTCGGACGCTTTCCGTCTCTCCTCCGCTACGAACCTTTCGTTCCGTCCCCTTACTGTCTCCATTTTCCGT
TTTCACTTTGCGATGTTACTCATCCGGGAATGACAAGTACAATGAACTGAACTCAACCAAAACAAGGACTCTCTCGTCGACGACGATGTCAGCACAGAAGCTGAAGAGGA
AAATTGATAAATTTTATGAGGGTGGTGATGCCGATTCATTACCAGAAATTTTCGAAGCAATTTTGAAAAGGAAGCTGTCGGGTAAACACGAAGATGCCGATGATGAGCTG
ATGAAAGAAATTCGACAGCGAATGCCCGGAGAAATTGAAGATTTCAAAGGTGAAGAATATGATTCAGAACTAACGGACGATGCCGCCAGTGATTCTGAGGAAGAAGATAA
AAGAATATAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCGAGCTCTATGGGGAGCTGTCTTCAATGTCTGTTCTCGGACGCTTTCCGTCTCTCCTCCGCTACGAACCTTTCGTTCCGTCCCCTTACTGTCTCCATTTTCCGT
TTTCACTTTGCGATGTTACTCATCCGGGAATGACAAGTACAATGAACTGAACTCAACCAAAACAAGGACTCTCTCGTCGACGACGATGTCAGCACAGAAGCTGAAGAGGA
AAATTGATAAATTTTATGAGGGTGGTGATGCCGATTCATTACCAGAAATTTTCGAAGCAATTTTGAAAAGGAAGCTGTCGGGTAAACACGAAGATGCCGATGATGAGCTG
ATGAAAGAAATTCGACAGCGAATGCCCGGAGAAATTGAAGATTTCAAAGGTGAAGAATATGATTCAGAACTAACGGACGATGCCGCCAGTGATTCTGAGGAAGAAGATAA
AAGAATATAA
Protein sequenceShow/hide protein sequence
MKRALWGAVFNVCSRTLSVSPPLRTFRSVPLLSPFSVFTLRCYSSGNDKYNELNSTKTRTLSSTTMSAQKLKRKIDKFYEGGDADSLPEIFEAILKRKLSGKHEDADDEL
MKEIRQRMPGEIEDFKGEEYDSELTDDAASDSEEEDKRI