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IVF0000841 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0000841
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr08:9167111..9167380
RNA-Seq ExpressionIVF0000841
SyntenyIVF0000841
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031678.1 retrotransposon protein [Cucumis melo var. makuwa]1.76e-3878.65Show/hide
Query:  MVEVIRSVMEFGNEQLKAIADWTKEKRAMEIEMRAQVVKQLQDIPELRSQYRTKLMQILFRSLEAIGGFLSIPTELKLEYCNILLQNNV
        MVEVI S  EFGN+QLK I DW KEKRA E+E+R +VVKQLQDIP+LRSQ R KLMQILFRS+EAI GFLSIPT+LKLEYCNILL+NNV
Subjt:  MVEVIRSVMEFGNEQLKAIADWTKEKRAMEIEMRAQVVKQLQDIPELRSQYRTKLMQILFRSLEAIGGFLSIPTELKLEYCNILLQNNV

KAA0042340.1 retrotransposon protein [Cucumis melo var. makuwa]8.37e-3674.42Show/hide
Query:  VEVIRSVMEFGNEQLKAIADWTKEKRAMEIEMRAQVVKQLQDIPELRSQYRTKLMQILFRSLEAIGGFLSIPTELKLEYCNILLQN
        VEVIRS M+FGN+QLKAIADW KEKRAM++E+RA VVKQLQDIP+L+++ R K++QILF S+E I GFLSIPTELKLEYCN+LL+N
Subjt:  VEVIRSVMEFGNEQLKAIADWTKEKRAMEIEMRAQVVKQLQDIPELRSQYRTKLMQILFRSLEAIGGFLSIPTELKLEYCNILLQN

KAA0062747.1 retrotransposon protein [Cucumis melo var. makuwa]2.57e-47100Show/hide
Query:  EVIRSVMEFGNEQLKAIADWTKEKRAMEIEMRAQVVKQLQDIPELRSQYRTKLMQILFRSLEAIGGFLSIPTELKLEYCNILLQNNV
        EVIRSVMEFGNEQLKAIADWTKEKRAMEIEMRAQVVKQLQDIPELRSQYRTKLMQILFRSLEAIGGFLSIPTELKLEYCNILLQNNV
Subjt:  EVIRSVMEFGNEQLKAIADWTKEKRAMEIEMRAQVVKQLQDIPELRSQYRTKLMQILFRSLEAIGGFLSIPTELKLEYCNILLQNNV

KAA0065769.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]2.00e-3678.16Show/hide
Query:  EVIRSVMEFGNEQLKAIADWTKEKRAMEIEMRAQVVKQLQDIPELRSQYRTKLMQILFRSLEAIGGFLSIPTELKLEYCNILLQNNV
        EVIRS MEF N+QLKAIADW KEKRA E+E+ A VVKQLQDIP+LRS+ R KLMQILFRS+E I GFLSIPT+LKLEYCN+LL+NNV
Subjt:  EVIRSVMEFGNEQLKAIADWTKEKRAMEIEMRAQVVKQLQDIPELRSQYRTKLMQILFRSLEAIGGFLSIPTELKLEYCNILLQNNV

XP_008441954.1 PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo]1.01e-4392.05Show/hide
Query:  VEVIRSVMEFGNEQLKAIADWTKEKRAMEIEMRAQVVKQLQDIPELRSQYRTKLMQILFRSLEAIGGFLSIPTELKLEYCNILLQNNV
        VEVIRSVMEFGNEQLKAIADW KEKRAME+EMRAQVVKQLQDIP+LRSQ R KLMQILFRSLEAI GFLSIPTELKLEYCNILLQN V
Subjt:  VEVIRSVMEFGNEQLKAIADWTKEKRAMEIEMRAQVVKQLQDIPELRSQYRTKLMQILFRSLEAIGGFLSIPTELKLEYCNILLQNNV

TrEMBL top hitse value%identityAlignment
A0A1S3B4L3 uncharacterized protein LOC1034859533.7e-3492.05Show/hide
Query:  VEVIRSVMEFGNEQLKAIADWTKEKRAMEIEMRAQVVKQLQDIPELRSQYRTKLMQILFRSLEAIGGFLSIPTELKLEYCNILLQNNV
        VEVIRSVMEFGNEQLKAIADW KEKRAME+EMRAQVVKQLQDIP+LRSQ R KLMQILFRSLEAI GFLSIPTELKLEYCNILLQN V
Subjt:  VEVIRSVMEFGNEQLKAIADWTKEKRAMEIEMRAQVVKQLQDIPELRSQYRTKLMQILFRSLEAIGGFLSIPTELKLEYCNILLQNNV

A0A5A7U0H7 Retrotransposon protein3.7e-3492.05Show/hide
Query:  VEVIRSVMEFGNEQLKAIADWTKEKRAMEIEMRAQVVKQLQDIPELRSQYRTKLMQILFRSLEAIGGFLSIPTELKLEYCNILLQNNV
        VEVIRSVMEFGNEQLKAIADW KEKRAME+EMRAQVVKQLQDIP+LRSQ R KLMQILFRSLEAI GFLSIPTELKLEYCNILLQN V
Subjt:  VEVIRSVMEFGNEQLKAIADWTKEKRAMEIEMRAQVVKQLQDIPELRSQYRTKLMQILFRSLEAIGGFLSIPTELKLEYCNILLQNNV

A0A5A7V8C5 Putative nuclease HARBI11.3e-2879.31Show/hide
Query:  EVIRSVMEFGNEQLKAIADWTKEKRAMEIEMRAQVVKQLQDIPELRSQYRTKLMQILFRSLEAIGGFLSIPTELKLEYCNILLQNNV
        E IRS+MEFGN+QLKAIA+W KEKRA E+E+  +VVKQLQDIPEL+SQ R KLMQILFRS+E I GFLSIP ELKLEYCNILLQNNV
Subjt:  EVIRSVMEFGNEQLKAIADWTKEKRAMEIEMRAQVVKQLQDIPELRSQYRTKLMQILFRSLEAIGGFLSIPTELKLEYCNILLQNNV

A0A5D3BZU3 Retrotransposon protein9.3e-3078.65Show/hide
Query:  MVEVIRSVMEFGNEQLKAIADWTKEKRAMEIEMRAQVVKQLQDIPELRSQYRTKLMQILFRSLEAIGGFLSIPTELKLEYCNILLQNNV
        MVEVI S  EFGN+QLK I DW KEKRA E+E+R +VVKQLQDIP+LRSQ R KLMQILFRS+EAI GFLSIPT+LKLEYCNILL+NNV
Subjt:  MVEVIRSVMEFGNEQLKAIADWTKEKRAMEIEMRAQVVKQLQDIPELRSQYRTKLMQILFRSLEAIGGFLSIPTELKLEYCNILLQNNV

A0A5D3DG22 Retrotransposon protein1.1e-38100Show/hide
Query:  EVIRSVMEFGNEQLKAIADWTKEKRAMEIEMRAQVVKQLQDIPELRSQYRTKLMQILFRSLEAIGGFLSIPTELKLEYCNILLQNNV
        EVIRSVMEFGNEQLKAIADWTKEKRAMEIEMRAQVVKQLQDIPELRSQYRTKLMQILFRSLEAIGGFLSIPTELKLEYCNILLQNNV
Subjt:  EVIRSVMEFGNEQLKAIADWTKEKRAMEIEMRAQVVKQLQDIPELRSQYRTKLMQILFRSLEAIGGFLSIPTELKLEYCNILLQNNV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAGAGGTGATCAGGAGTGTAATGGAATTTGGAAATGAGCAATTAAAGGCAATTGCAGATTGGACAAAAGAGAAGCGTGCAATGGAGATCGAAATGCGTGCTCAAGT
TGTGAAACAACTGCAAGATATCCCCGAACTACGAAGCCAATATAGGACAAAGCTTATGCAAATCTTATTCCGTAGTTTGGAGGCCATTGGGGGATTCTTGTCGATTCCAA
CAGAACTTAAATTGGAGTATTGCAATATTCTCTTGCAAAATAATGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTAGAGGTGATCAGGAGTGTAATGGAATTTGGAAATGAGCAATTAAAGGCAATTGCAGATTGGACAAAAGAGAAGCGTGCAATGGAGATCGAAATGCGTGCTCAAGT
TGTGAAACAACTGCAAGATATCCCCGAACTACGAAGCCAATATAGGACAAAGCTTATGCAAATCTTATTCCGTAGTTTGGAGGCCATTGGGGGATTCTTGTCGATTCCAA
CAGAACTTAAATTGGAGTATTGCAATATTCTCTTGCAAAATAATGTTTGA
Protein sequenceShow/hide protein sequence
MVEVIRSVMEFGNEQLKAIADWTKEKRAMEIEMRAQVVKQLQDIPELRSQYRTKLMQILFRSLEAIGGFLSIPTELKLEYCNILLQNNV