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IVF0000845 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0000845
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionAlba domain-containing protein
Genome locationtig00000135:1251246..1252601
RNA-Seq ExpressionIVF0000845
SyntenyIVF0000845
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR002775 - DNA/RNA-binding protein Alba-like
IPR014560 - Uncharacterised conserved protein UCP030333, DNA/RNA-binding Alba-related
IPR036882 - Alba-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134424.1 uncharacterized protein At2g34160 [Cucumis sativus]4.47e-8995.3Show/hide
Query:  MDSGTVVSEATPEVKNEIQNEEEKLLVTAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGL
        MDSG VVSEA PEVKNEI+NEEE+LLV APDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGL
Subjt:  MDSGTVVSEATPEVKNEIQNEEEKLLVTAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGL

Query:  AFQKNLTISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAPTSEDS
        AFQK L ISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAPTSEDS
Subjt:  AFQKNLTISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAPTSEDS

XP_008438573.1 PREDICTED: uncharacterized protein At2g34160-like [Cucumis melo]2.06e-94100Show/hide
Query:  MDSGTVVSEATPEVKNEIQNEEEKLLVTAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGL
        MDSGTVVSEATPEVKNEIQNEEEKLLVTAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGL
Subjt:  MDSGTVVSEATPEVKNEIQNEEEKLLVTAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGL

Query:  AFQKNLTISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAPTSEDS
        AFQKNLTISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAPTSEDS
Subjt:  AFQKNLTISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAPTSEDS

XP_022924600.1 uncharacterized protein At2g34160-like [Cucurbita moschata]1.54e-8087.92Show/hide
Query:  MDSGTVVSEATPEVKNEIQNEEEKLLVTAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGL
        M+SG VVSEA  E+KNEI+NEEEKLLV APD EVKEIAVLTE KKKRNQIQVSNVKKPFFYYYNLSKR+IKQYNEVELSALGMAIPTVVTIAEILK+NGL
Subjt:  MDSGTVVSEATPEVKNEIQNEEEKLLVTAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGL

Query:  AFQKNLTISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAPTSEDS
        AFQK LTISSVSLKNGEN +LVMKPKIEIAL+NAEK+K ISTA TSEDS
Subjt:  AFQKNLTISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAPTSEDS

XP_022980835.1 uncharacterized protein At2g34160-like [Cucurbita maxima]1.32e-8189.26Show/hide
Query:  MDSGTVVSEATPEVKNEIQNEEEKLLVTAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGL
        M+SG VVSEAT EVKNEI+NEEEKLLV APD EVKEIAVLTE KKKRNQIQVSNVKKPFFYYYNLSKR+IKQYNEVELSALGMAIPTVVTIAEILK+NGL
Subjt:  MDSGTVVSEATPEVKNEIQNEEEKLLVTAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGL

Query:  AFQKNLTISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAPTSEDS
        AFQK LTISSVSLKNGEN +LVMKPKIEIAL+NAEK+K ISTA TSEDS
Subjt:  AFQKNLTISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAPTSEDS

XP_038877187.1 uncharacterized protein At2g34160-like [Benincasa hispida]2.90e-8592.62Show/hide
Query:  MDSGTVVSEATPEVKNEIQNEEEKLLVTAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGL
        M+SG VVSE TPEVKNEI++EEEKLLV A D EVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGL
Subjt:  MDSGTVVSEATPEVKNEIQNEEEKLLVTAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGL

Query:  AFQKNLTISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAPTSEDS
        AFQK LTISSVSLK GEN KLVMKPKIEIALVNAEKIKNISTAPTSEDS
Subjt:  AFQKNLTISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAPTSEDS

TrEMBL top hitse value%identityAlignment
A0A0A0L8F8 Alba domain-containing protein3.2e-6795.3Show/hide
Query:  MDSGTVVSEATPEVKNEIQNEEEKLLVTAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGL
        MDSG VVSEA PEVKNEI+NEEE+LLV APDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGL
Subjt:  MDSGTVVSEATPEVKNEIQNEEEKLLVTAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGL

Query:  AFQKNLTISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAPTSEDS
        AFQK L ISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAPTSEDS
Subjt:  AFQKNLTISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAPTSEDS

A0A1S3AXD3 uncharacterized protein At2g34160-like2.8e-71100Show/hide
Query:  MDSGTVVSEATPEVKNEIQNEEEKLLVTAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGL
        MDSGTVVSEATPEVKNEIQNEEEKLLVTAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGL
Subjt:  MDSGTVVSEATPEVKNEIQNEEEKLLVTAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGL

Query:  AFQKNLTISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAPTSEDS
        AFQKNLTISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAPTSEDS
Subjt:  AFQKNLTISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAPTSEDS

A0A5D3CZ81 Alba DNA/RNA-binding protein2.8e-71100Show/hide
Query:  MDSGTVVSEATPEVKNEIQNEEEKLLVTAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGL
        MDSGTVVSEATPEVKNEIQNEEEKLLVTAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGL
Subjt:  MDSGTVVSEATPEVKNEIQNEEEKLLVTAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGL

Query:  AFQKNLTISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAPTSEDS
        AFQKNLTISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAPTSEDS
Subjt:  AFQKNLTISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAPTSEDS

A0A6J1EFH1 uncharacterized protein At2g34160-like1.0e-6087.92Show/hide
Query:  MDSGTVVSEATPEVKNEIQNEEEKLLVTAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGL
        M+SG VVSEA  E+KNEI+NEEEKLLV APD EVKEIAVLTE KKKRNQIQVSNVKKPFFYYYNLSKR+IKQYNEVELSALGMAIPTVVTIAEILK+NGL
Subjt:  MDSGTVVSEATPEVKNEIQNEEEKLLVTAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGL

Query:  AFQKNLTISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAPTSEDS
        AFQK LTISSVSLKNGEN +LVMKPKIEIAL+NAEK+K ISTA TSEDS
Subjt:  AFQKNLTISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAPTSEDS

A0A6J1IXN8 uncharacterized protein At2g34160-like1.5e-6189.26Show/hide
Query:  MDSGTVVSEATPEVKNEIQNEEEKLLVTAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGL
        M+SG VVSEAT EVKNEI+NEEEKLLV APD EVKEIAVLTE KKKRNQIQVSNVKKPFFYYYNLSKR+IKQYNEVELSALGMAIPTVVTIAEILK+NGL
Subjt:  MDSGTVVSEATPEVKNEIQNEEEKLLVTAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGL

Query:  AFQKNLTISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAPTSEDS
        AFQK LTISSVSLKNGEN +LVMKPKIEIAL+NAEK+K ISTA TSEDS
Subjt:  AFQKNLTISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAPTSEDS

SwissProt top hitse value%identityAlignment
O22969 Uncharacterized protein At2g341603.2e-2455.34Show/hide
Query:  KKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKNLTISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAP
        +K+N+IQVSN KKP F+Y NL+KR+++QYN+VELSALGMAI TVVT+ EILK NG A +K +  S+V +K+   G+ V K KIEI LV +EK   +  A 
Subjt:  KKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKNLTISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAP

Query:  TSE
          E
Subjt:  TSE

Arabidopsis top hitse value%identityAlignment
AT1G29250.1 Alba DNA/RNA-binding protein8.8e-2554.37Show/hide
Query:  KKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKNLTISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAP
        +K+N+IQVSN KKP F+Y NL+KR+++QY +VELSALGMAI TVVT+AEILK NG A +K +  S+V +K+   G+ V K KIEI L  +EK   +  A 
Subjt:  KKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKNLTISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAP

Query:  TSE
          E
Subjt:  TSE

AT2G34160.1 Alba DNA/RNA-binding protein2.3e-2555.34Show/hide
Query:  KKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKNLTISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAP
        +K+N+IQVSN KKP F+Y NL+KR+++QYN+VELSALGMAI TVVT+ EILK NG A +K +  S+V +K+   G+ V K KIEI LV +EK   +  A 
Subjt:  KKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKNLTISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAP

Query:  TSE
          E
Subjt:  TSE

AT3G04620.1 Alba DNA/RNA-binding protein2.3e-2553.39Show/hide
Query:  EKLLVTAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKNLTISSVSLKNGENGKLV
        E+ +V AP +      V T    K+N+IQVSN KKP F+Y NL+KR+I+Q+NEVELSALGMAI TVVTI+EILK NGLA +K +  S+V +K+   GK+V
Subjt:  EKLLVTAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKNLTISSVSLKNGENGKLV

Query:  MKPKIEIALVNAEKIKNI
         K KIEI L  ++K  ++
Subjt:  MKPKIEIALVNAEKIKNI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCAGGCACGGTCGTTTCAGAAGCCACCCCTGAGGTCAAGAATGAAATCCAAAATGAGGAAGAAAAGCTCCTCGTCACTGCCCCTGATAGTGAGGTTAAGGAGAT
TGCTGTTTTGACCGAGTTCAAGAAGAAGAGGAATCAAATTCAGGTTTCCAATGTCAAGAAGCCCTTCTTTTACTACTACAATCTTTCTAAGAGGCACATTAAGCAGTACA
ATGAAGTTGAGCTTTCTGCATTAGGAATGGCTATACCTACTGTAGTGACGATCGCCGAGATTCTGAAGAGGAACGGGTTGGCATTTCAAAAGAATTTGACGATATCTTCT
GTCAGTTTGAAGAATGGGGAAAACGGCAAGCTGGTTATGAAACCTAAGATTGAGATTGCATTGGTAAATGCAGAAAAGATCAAGAACATTTCGACTGCTCCAACCAGTGA
AGATTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATTAATTTTCCATCGCTTTCATTTCTTAAGGGGCGCACCCGTCACCGGAAAACGCAGTAACTGCCGGTGAACGGATGCTAAACGATACCGTTGATACCTTAACCGCTCAA
ACGTCTCCGTCGTAACAAAAATTGCCTCCGCCAGCTTCTGATTTCCTTCACATTCTTTATAAATTACTCCTGCAGTTCGATTCATTTTATCAAGTTCACAATTAGAAGTA
GAATCTTTTCATTCCTTCTTCGAGATTAGGCAATGGATTCAGGCACGGTCGTTTCAGAAGCCACCCCTGAGGTCAAGAATGAAATCCAAAATGAGGAAGAAAAGCTCCTC
GTCACTGCCCCTGATAGTGAGGTTAAGGAGATTGCTGTTTTGACCGAGTTCAAGAAGAAGAGGAATCAAATTCAGGTTTCCAATGTCAAGAAGCCCTTCTTTTACTACTA
CAATCTTTCTAAGAGGCACATTAAGCAGTACAATGAAGTTGAGCTTTCTGCATTAGGAATGGCTATACCTACTGTAGTGACGATCGCCGAGATTCTGAAGAGGAACGGGT
TGGCATTTCAAAAGAATTTGACGATATCTTCTGTCAGTTTGAAGAATGGGGAAAACGGCAAGCTGGTTATGAAACCTAAGATTGAGATTGCATTGGTAAATGCAGAAAAG
ATCAAGAACATTTCGACTGCTCCAACCAGTGAAGATTCTTGAAACAAATTTTGTTAGTAGTGAAGTATCATTCTCGAATCTGGCTTTACTTCTTGTTTGCCTACTTTGCC
CAAAGTTTCTATAAGAGATTAGGGATCTGCTAGGAACTAGGAGAGTGAATTGCAGATCTTTTAGTCGAAGCAGATTCAATTCTGATAGAACCTAAAGAGAGGAGTTCCTT
TTCTTCTCCCAGTGAGATTCTTAAGGATTGGATGTAGAGAAGCTTTATTTGTAATTGAACTACCAACTTCTAATTGCATATAAAATTGGATAAA
Protein sequenceShow/hide protein sequence
MDSGTVVSEATPEVKNEIQNEEEKLLVTAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKNLTISS
VSLKNGENGKLVMKPKIEIALVNAEKIKNISTAPTSEDS