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IVF0000869 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0000869
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRWP-RK domain-containing protein
Genome locationchr03:10077667..10079889
RNA-Seq ExpressionIVF0000869
SyntenyIVF0000869
Gene Ontology termsGO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR003035 - RWP-RK domain
IPR044607 - Transcription factor RKD-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050515.1 protein RKD4 [Cucumis melo var. makuwa]6.43e-5575.78Show/hide
Query:  GNNNGNKRRKGSFVLGLEEIQKYFHIPISEAAKEMNVGLSVLKE-------------------------DEMGLTNEVKGLEEHKRLLEEMPNMDLTHTI
        GNNNGNKRRKGSFVLGLEEI+KYFHIPISEAAKEMNVGL+VLK                           EMGLTNEVKGLEEHKRLLEEMPNMDLTHT+
Subjt:  GNNNGNKRRKGSFVLGLEEIQKYFHIPISEAAKEMNVGLSVLKE-------------------------DEMGLTNEVKGLEEHKRLLEEMPNMDLTHTI

Query:  KRLRQACFKANYKKNRRPRSNNIASLHH
        KRLRQACFKANYKKNRR RSNNIASLHH
Subjt:  KRLRQACFKANYKKNRRPRSNNIASLHH

KAE8650549.1 hypothetical protein Csa_011321 [Cucumis sativus]2.96e-4669.29Show/hide
Query:  NNNGNKRRKGSFVLGLEEIQKYFHIPISEAAKEMNVGLSVLKE-------------------------DEMGLTNEVKGLEEHKRLLEEMPNMDLTHTIK
        NNNGNKRRK SFVLGLEEI+KY+HIPISEAAKEMNVGL+VLK                           EMGLTNEVKGLEE KRLL E PNMDLTHT K
Subjt:  NNNGNKRRKGSFVLGLEEIQKYFHIPISEAAKEMNVGLSVLKE-------------------------DEMGLTNEVKGLEEHKRLLEEMPNMDLTHTIK

Query:  RLRQACFKANYKKNRRPRSNNIASLHH
        RLRQACFK  Y+KNRR RSNNIASLHH
Subjt:  RLRQACFKANYKKNRRPRSNNIASLHH

TYK29190.1 protein RKD4 [Cucumis melo var. makuwa]1.94e-5375.78Show/hide
Query:  GNNNGNKRRKGSFVLGLEEIQKYFHIPISEAAKEMNVGLSVLKE-------------------------DEMGLTNEVKGLEEHKRLLEEMPNMDLTHTI
        GNNNGNKRRKGSFVLGLEEI+KYFHIPISEAAKEMNVGL+VLK                           EMGLTNEVKGLEEHKRLLEEMPNMDLTHT+
Subjt:  GNNNGNKRRKGSFVLGLEEIQKYFHIPISEAAKEMNVGLSVLKE-------------------------DEMGLTNEVKGLEEHKRLLEEMPNMDLTHTI

Query:  KRLRQACFKANYKKNRRPRSNNIASLHH
        KRLRQACFKANYKKNRR RSNNIASLHH
Subjt:  KRLRQACFKANYKKNRRPRSNNIASLHH

XP_008466842.1 PREDICTED: protein RKD4 [Cucumis melo]6.73e-5375Show/hide
Query:  GNNNGNKRRKGSFVLGLEEIQKYFHIPISEAAKEMNVGLSVLKE-------------------------DEMGLTNEVKGLEEHKRLLEEMPNMDLTHTI
        GNNNGNKRRKGSFVLGLEEI+KYFHIPIS+AAKEMNVGL+VLK                           EMGLTNEVKGLEEHKRLLEEMPNMDLTHT+
Subjt:  GNNNGNKRRKGSFVLGLEEIQKYFHIPISEAAKEMNVGLSVLKE-------------------------DEMGLTNEVKGLEEHKRLLEEMPNMDLTHTI

Query:  KRLRQACFKANYKKNRRPRSNNIASLHH
        KRLRQACFKANYKKNRR RSNNIASLHH
Subjt:  KRLRQACFKANYKKNRRPRSNNIASLHH

XP_031738302.1 protein RKD4 [Cucumis sativus]6.31e-4569.29Show/hide
Query:  NNNGNKRRKGSFVLGLEEIQKYFHIPISEAAKEMNVGLSVLKE-------------------------DEMGLTNEVKGLEEHKRLLEEMPNMDLTHTIK
        NNNGNKRRK SFVLGLEEI+KY+HIPISEAAKEMNVGL+VLK                           EMGLTNEVKGLEE KRLL E PNMDLTHT K
Subjt:  NNNGNKRRKGSFVLGLEEIQKYFHIPISEAAKEMNVGLSVLKE-------------------------DEMGLTNEVKGLEEHKRLLEEMPNMDLTHTIK

Query:  RLRQACFKANYKKNRRPRSNNIASLHH
        RLRQACFK  Y+KNRR RSNNIASLHH
Subjt:  RLRQACFKANYKKNRRPRSNNIASLHH

TrEMBL top hitse value%identityAlignment
A0A0A0L6Q6 RWP-RK domain-containing protein5.7e-3669.29Show/hide
Query:  NNNGNKRRKGSFVLGLEEIQKYFHIPISEAAKEMNVGLSVLKE-------------------------DEMGLTNEVKGLEEHKRLLEEMPNMDLTHTIK
        NNNGNKRRK SFVLGLEEI+KY+HIPISEAAKEMNVGL+VLK                           EMGLTNEVKGLEE KRLL E PNMDLTHT K
Subjt:  NNNGNKRRKGSFVLGLEEIQKYFHIPISEAAKEMNVGLSVLKE-------------------------DEMGLTNEVKGLEEHKRLLEEMPNMDLTHTIK

Query:  RLRQACFKANYKKNRRPRSNNIASLHH
        RLRQACFK  Y+KNRR RSNNIASLHH
Subjt:  RLRQACFKANYKKNRRPRSNNIASLHH

A0A1S3CS47 protein RKD44.0e-4275Show/hide
Query:  GNNNGNKRRKGSFVLGLEEIQKYFHIPISEAAKEMNVGLSVLKE-------------------------DEMGLTNEVKGLEEHKRLLEEMPNMDLTHTI
        GNNNGNKRRKGSFVLGLEEI+KYFHIPIS+AAKEMNVGL+VLK                           EMGLTNEVKGLEEHKRLLEEMPNMDLTHT+
Subjt:  GNNNGNKRRKGSFVLGLEEIQKYFHIPISEAAKEMNVGLSVLKE-------------------------DEMGLTNEVKGLEEHKRLLEEMPNMDLTHTI

Query:  KRLRQACFKANYKKNRRPRSNNIASLHH
        KRLRQACFKANYKKNRR RSNNIASLHH
Subjt:  KRLRQACFKANYKKNRRPRSNNIASLHH

A0A5A7UAA0 Protein RKD41.4e-4275.78Show/hide
Query:  GNNNGNKRRKGSFVLGLEEIQKYFHIPISEAAKEMNVGLSVLKE-------------------------DEMGLTNEVKGLEEHKRLLEEMPNMDLTHTI
        GNNNGNKRRKGSFVLGLEEI+KYFHIPISEAAKEMNVGL+VLK                           EMGLTNEVKGLEEHKRLLEEMPNMDLTHT+
Subjt:  GNNNGNKRRKGSFVLGLEEIQKYFHIPISEAAKEMNVGLSVLKE-------------------------DEMGLTNEVKGLEEHKRLLEEMPNMDLTHTI

Query:  KRLRQACFKANYKKNRRPRSNNIASLHH
        KRLRQACFKANYKKNRR RSNNIASLHH
Subjt:  KRLRQACFKANYKKNRRPRSNNIASLHH

A0A5D3E104 Protein RKD41.4e-4275.78Show/hide
Query:  GNNNGNKRRKGSFVLGLEEIQKYFHIPISEAAKEMNVGLSVLKE-------------------------DEMGLTNEVKGLEEHKRLLEEMPNMDLTHTI
        GNNNGNKRRKGSFVLGLEEI+KYFHIPISEAAKEMNVGL+VLK                           EMGLTNEVKGLEEHKRLLEEMPNMDLTHT+
Subjt:  GNNNGNKRRKGSFVLGLEEIQKYFHIPISEAAKEMNVGLSVLKE-------------------------DEMGLTNEVKGLEEHKRLLEEMPNMDLTHTI

Query:  KRLRQACFKANYKKNRRPRSNNIASLHH
        KRLRQACFKANYKKNRR RSNNIASLHH
Subjt:  KRLRQACFKANYKKNRRPRSNNIASLHH

E5GBA6 Transcription factor4.0e-4275Show/hide
Query:  GNNNGNKRRKGSFVLGLEEIQKYFHIPISEAAKEMNVGLSVLKE-------------------------DEMGLTNEVKGLEEHKRLLEEMPNMDLTHTI
        GNNNGNKRRKGSFVLGLEEI+KYFHIPIS+AAKEMNVGL+VLK                           EMGLTNEVKGLEEHKRLLEEMPNMDLTHT+
Subjt:  GNNNGNKRRKGSFVLGLEEIQKYFHIPISEAAKEMNVGLSVLKE-------------------------DEMGLTNEVKGLEEHKRLLEEMPNMDLTHTI

Query:  KRLRQACFKANYKKNRRPRSNNIASLHH
        KRLRQACFKANYKKNRR RSNNIASLHH
Subjt:  KRLRQACFKANYKKNRRPRSNNIASLHH

SwissProt top hitse value%identityAlignment
Q9CA66 Protein RKD21.1e-0730.09Show/hide
Query:  LGLEEIQKYFHIPISEAAKEMNVGLSVLK-----------------------------------EDEMGLTNEVKGLEEHKRLLEEMPNMDLTHTIKRLR
        L  E + +YF++PI++AA  +NVGL++LK                                   E+   L + ++ LE+ KR +E++P+++     KRLR
Subjt:  LGLEEIQKYFHIPISEAAKEMNVGLSVLK-----------------------------------EDEMGLTNEVKGLEEHKRLLEEMPNMDLTHTIKRLR

Query:  QACFKANYKKNRR
        QACFKAN+K+ ++
Subjt:  QACFKANYKKNRR

Q9FGD1 Protein RKD32.8e-0832.73Show/hide
Query:  EEIQKYFHIPISEAAKEMNVGLSVLK--------------------------EDEMG----------LTNEVKGLEEHKRLLEEMPNMDLTHTIKRLRQA
        E +++YF++PI++AAKE+N+G+++LK                          +D +G          L N ++ LE  K+++EE+P+++     KRLRQA
Subjt:  EEIQKYFHIPISEAAKEMNVGLSVLK--------------------------EDEMG----------LTNEVKGLEEHKRLLEEMPNMDLTHTIKRLRQA

Query:  CFKANYKKNR
        CFKA YK+ R
Subjt:  CFKANYKKNR

Q9LVU8 Protein RKD43.8e-1338.74Show/hide
Query:  NKRRKGSFVLGLEEIQKYFHIPISEAAKEMNVGLSVLKE-------------------------DEMGLTNEVKGLEEHKRLLEEMPNMDLTHTIKRLRQ
        N ++K    L + EI+++F  PI +AAKE+NVGL+VLK+                           +G+  EVK LEEH+ L+E+ P+ +L+   K+LRQ
Subjt:  NKRRKGSFVLGLEEIQKYFHIPISEAAKEMNVGLSVLKE-------------------------DEMGLTNEVKGLEEHKRLLEEMPNMDLTHTIKRLRQ

Query:  ACFKANYKKNR
        ACFKANYK+ +
Subjt:  ACFKANYKKNR

Q9M9U9 Protein RKD15.1e-1030.99Show/hide
Query:  DFFSKGNNNGNKRRK----------GSFVLGLEEIQKYFHIPISEAAKEMNVGLSVLK-----------------------------------EDEMGLT
        DF  K      K+R+           S  L  E I  YF++PI++AA+E+N+GL++LK                                   E+E  L 
Subjt:  DFFSKGNNNGNKRRK----------GSFVLGLEEIQKYFHIPISEAAKEMNVGLSVLK-----------------------------------EDEMGLT

Query:  NEVKGLEEHKRLLEEMPNMDLTHTIKRLRQACFKANYKKNRR
        N ++ LE+ K+ +E++P++      KRLRQACFKAN+K+ RR
Subjt:  NEVKGLEEHKRLLEEMPNMDLTHTIKRLRQACFKANYKKNRR

Arabidopsis top hitse value%identityAlignment
AT1G18790.1 RWP-RK domain-containing protein3.6e-1130.99Show/hide
Query:  DFFSKGNNNGNKRRK----------GSFVLGLEEIQKYFHIPISEAAKEMNVGLSVLK-----------------------------------EDEMGLT
        DF  K      K+R+           S  L  E I  YF++PI++AA+E+N+GL++LK                                   E+E  L 
Subjt:  DFFSKGNNNGNKRRK----------GSFVLGLEEIQKYFHIPISEAAKEMNVGLSVLK-----------------------------------EDEMGLT

Query:  NEVKGLEEHKRLLEEMPNMDLTHTIKRLRQACFKANYKKNRR
        N ++ LE+ K+ +E++P++      KRLRQACFKAN+K+ RR
Subjt:  NEVKGLEEHKRLLEEMPNMDLTHTIKRLRQACFKANYKKNRR

AT1G74480.1 RWP-RK domain-containing protein7.6e-0930.09Show/hide
Query:  LGLEEIQKYFHIPISEAAKEMNVGLSVLK-----------------------------------EDEMGLTNEVKGLEEHKRLLEEMPNMDLTHTIKRLR
        L  E + +YF++PI++AA  +NVGL++LK                                   E+   L + ++ LE+ KR +E++P+++     KRLR
Subjt:  LGLEEIQKYFHIPISEAAKEMNVGLSVLK-----------------------------------EDEMGLTNEVKGLEEHKRLLEEMPNMDLTHTIKRLR

Query:  QACFKANYKKNRR
        QACFKAN+K+ ++
Subjt:  QACFKANYKKNRR

AT5G53040.1 RWP-RK domain-containing protein2.7e-1438.74Show/hide
Query:  NKRRKGSFVLGLEEIQKYFHIPISEAAKEMNVGLSVLKE-------------------------DEMGLTNEVKGLEEHKRLLEEMPNMDLTHTIKRLRQ
        N ++K    L + EI+++F  PI +AAKE+NVGL+VLK+                           +G+  EVK LEEH+ L+E+ P+ +L+   K+LRQ
Subjt:  NKRRKGSFVLGLEEIQKYFHIPISEAAKEMNVGLSVLKE-------------------------DEMGLTNEVKGLEEHKRLLEEMPNMDLTHTIKRLRQ

Query:  ACFKANYKKNR
        ACFKANYK+ +
Subjt:  ACFKANYKKNR

AT5G66990.1 RWP-RK domain-containing protein2.0e-0932.73Show/hide
Query:  EEIQKYFHIPISEAAKEMNVGLSVLK--------------------------EDEMG----------LTNEVKGLEEHKRLLEEMPNMDLTHTIKRLRQA
        E +++YF++PI++AAKE+N+G+++LK                          +D +G          L N ++ LE  K+++EE+P+++     KRLRQA
Subjt:  EEIQKYFHIPISEAAKEMNVGLSVLK--------------------------EDEMG----------LTNEVKGLEEHKRLLEEMPNMDLTHTIKRLRQA

Query:  CFKANYKKNR
        CFKA YK+ R
Subjt:  CFKANYKKNR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCACCATCATCTATATATAACTTGACACTAATGTATTGTCATCAATACCCTTACATTGATGCTTTACATATCTCAACCAAATCTGACTCCTACTGCTACCGTGATGC
TAATTCCAGCCATGCTGCAACATCTAACGCCGCCCAAATCCGACTCCAGCCGCCTCCTTCATCTCCACTAGACTTCTTCTCTAAAGGAAATAATAATGGGAATAAGAGGA
GAAAAGGTAGTTTTGTGTTGGGATTGGAAGAGATTCAAAAATACTTTCATATACCAATATCAGAAGCAGCAAAAGAGATGAATGTTGGTTTGTCAGTGCTTAAAGAAGAT
GAAATGGGGTTAACAAATGAGGTAAAAGGGTTAGAGGAGCACAAGAGGCTATTGGAGGAAATGCCAAATATGGACCTCACCCACACAATCAAAAGGCTGAGGCAAGCTTG
CTTCAAAGCCAATTACAAGAAAAACAGAAGACCTAGGTCCAATAATATTGCTTCTCTTCATCACTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCACCATCATCTATATATAACTTGACACTAATGTATTGTCATCAATACCCTTACATTGATGCTTTACATATCTCAACCAAATCTGACTCCTACTGCTACCGTGATGC
TAATTCCAGCCATGCTGCAACATCTAACGCCGCCCAAATCCGACTCCAGCCGCCTCCTTCATCTCCACTAGACTTCTTCTCTAAAGGAAATAATAATGGGAATAAGAGGA
GAAAAGGTAGTTTTGTGTTGGGATTGGAAGAGATTCAAAAATACTTTCATATACCAATATCAGAAGCAGCAAAAGAGATGAATGTTGGTTTGTCAGTGCTTAAAGAAGAT
GAAATGGGGTTAACAAATGAGGTAAAAGGGTTAGAGGAGCACAAGAGGCTATTGGAGGAAATGCCAAATATGGACCTCACCCACACAATCAAAAGGCTGAGGCAAGCTTG
CTTCAAAGCCAATTACAAGAAAAACAGAAGACCTAGGTCCAATAATATTGCTTCTCTTCATCACTAA
Protein sequenceShow/hide protein sequence
MSPSSIYNLTLMYCHQYPYIDALHISTKSDSYCYRDANSSHAATSNAAQIRLQPPPSSPLDFFSKGNNNGNKRRKGSFVLGLEEIQKYFHIPISEAAKEMNVGLSVLKED
EMGLTNEVKGLEEHKRLLEEMPNMDLTHTIKRLRQACFKANYKKNRRPRSNNIASLHH