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IVF0000909 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0000909
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr08:30123292..30123564
RNA-Seq ExpressionIVF0000909
SyntenyIVF0000909
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045021.1 hypothetical protein E6C27_scaffold30G00060 [Cucumis melo var. makuwa]9.65e-5498.86Show/hide
Query:  QFYFGLSEDTQQTVGAMFVGGEMLRSSYNEIRGTLDGMTNNSQEWKDDGFGSQQEDRRNRGNKDRDDGVDRNVIVALEGQVTEMSKLL
        +FYFGLSEDTQQTVGAMFVGGEMLRSSYNEIRGTLDGMTNNSQEWKDDGFGSQQEDRRNRGNKDRDDGVDRNVIVALEGQVTEMSKLL
Subjt:  QFYFGLSEDTQQTVGAMFVGGEMLRSSYNEIRGTLDGMTNNSQEWKDDGFGSQQEDRRNRGNKDRDDGVDRNVIVALEGQVTEMSKLL

KAA0046468.1 hypothetical protein E6C27_scaffold543G00470 [Cucumis melo var. makuwa]2.42e-2360Show/hide
Query:  MEQFYFGLSEDTQQTVGAMFVGGEMLRSSYNEIRGTLDGMTNNSQEWKDDGFGSQQEDRRNRGNKDRDDGVDRNVIVALEGQVTEMSKLL
        ME+FYF LSED QQTV  +FVGG +LR+SYN+ +  LD M +NSQE +DD   SQQE+  NRG  D  +G+DRN +V L+GQVTEM+KLL
Subjt:  MEQFYFGLSEDTQQTVGAMFVGGEMLRSSYNEIRGTLDGMTNNSQEWKDDGFGSQQEDRRNRGNKDRDDGVDRNVIVALEGQVTEMSKLL

KAA0048713.1 hypothetical protein E6C27_scaffold43G00050 [Cucumis melo var. makuwa]4.71e-2255.56Show/hide
Query:  MEQFYFGLSEDTQQTVGAMFVGGEMLRSSYNEIRGTLDGMTNNSQEWKDDGFGSQQEDRRNRGNKDR-DDGVDRNVIVALEGQVTEMSKL
        MEQFYFGLS++T Q+   +F GG MLRSSYN+I+  LD M +NSQEW+D+ FGS+ + R  +GN+ R +DG+D +++VAL+GQV EM+ L
Subjt:  MEQFYFGLSEDTQQTVGAMFVGGEMLRSSYNEIRGTLDGMTNNSQEWKDDGFGSQQEDRRNRGNKDR-DDGVDRNVIVALEGQVTEMSKL

KGN44484.1 hypothetical protein Csa_015918 [Cucumis sativus]6.24e-2255.56Show/hide
Query:  MEQFYFGLSEDTQQTVGAMFVGGEMLRSSYNEIRGTLDGMTNNSQEWKDDGFGSQQEDRRNRGNKDRDDGVDRNVIVALEGQVTEMSKLL
        ME FYFGLS+DT Q V  +FVGG MLRSSYN+I+ TLD M+NNSQEW D GFGS+   R         +G+D++V+V L+GQ+  M+ LL
Subjt:  MEQFYFGLSEDTQQTVGAMFVGGEMLRSSYNEIRGTLDGMTNNSQEWKDDGFGSQQEDRRNRGNKDRDDGVDRNVIVALEGQVTEMSKLL

KGN53801.1 hypothetical protein Csa_014772 [Cucumis sativus]2.63e-2257.14Show/hide
Query:  MEQFYFGLSEDTQQTVGAMFVGGEMLRSSYNEIRGTLDGMTNNSQEWKDDGFGSQQEDRRNRGNKDRDD-GVDRNVIVALEGQVTEMSKLL
        +EQFYFGLS DTQQ V A+F+GG MLR S N I+ TLD M +NSQEW+D+ FGS  E + NR  K R + G + N ++ L+ QVTEM+KLL
Subjt:  MEQFYFGLSEDTQQTVGAMFVGGEMLRSSYNEIRGTLDGMTNNSQEWKDDGFGSQQEDRRNRGNKDRDD-GVDRNVIVALEGQVTEMSKLL

TrEMBL top hitse value%identityAlignment
A0A0A0K6F9 Uncharacterized protein3.5e-1657.78Show/hide
Query:  MEQFYFGLSEDTQQTVGAMFVGGEMLRSSYNEIRGTLDGMTNNSQEWKDDGFGSQQEDRRNRGNKDRDDGVDRNVIVALEGQVTEMSKLL
        ME FYFGLS+DT Q V  +FVGG MLRSSYN+I+ TLD M+NNSQEW D GFGS     R+RG     +G+D++V+V L+GQ+  M+ LL
Subjt:  MEQFYFGLSEDTQQTVGAMFVGGEMLRSSYNEIRGTLDGMTNNSQEWKDDGFGSQQEDRRNRGNKDRDDGVDRNVIVALEGQVTEMSKLL

A0A0A0L0Y4 Uncharacterized protein4.5e-1657.14Show/hide
Query:  MEQFYFGLSEDTQQTVGAMFVGGEMLRSSYNEIRGTLDGMTNNSQEWKDDGFGSQQEDRRNRGNKDR-DDGVDRNVIVALEGQVTEMSKLL
        +EQFYFGLS DTQQ V A+F+GG MLR S N I+ TLD M +NSQEW+D+ FGS  E + NR  K R + G + N ++ L+ QVTEM+KLL
Subjt:  MEQFYFGLSEDTQQTVGAMFVGGEMLRSSYNEIRGTLDGMTNNSQEWKDDGFGSQQEDRRNRGNKDR-DDGVDRNVIVALEGQVTEMSKLL

A0A5A7TUE1 Uncharacterized protein4.1e-1760Show/hide
Query:  MEQFYFGLSEDTQQTVGAMFVGGEMLRSSYNEIRGTLDGMTNNSQEWKDDGFGSQQEDRRNRGNKDRDDGVDRNVIVALEGQVTEMSKLL
        ME+FYF LSED QQTV  +FVGG +LR+SYN+ +  LD M +NSQE +DD   SQQE+  NRG    D+G+DRN +V L+GQVTEM+KLL
Subjt:  MEQFYFGLSEDTQQTVGAMFVGGEMLRSSYNEIRGTLDGMTNNSQEWKDDGFGSQQEDRRNRGNKDRDDGVDRNVIVALEGQVTEMSKLL

A0A5D3CC26 Uncharacterized protein1.4e-1755.56Show/hide
Query:  MEQFYFGLSEDTQQTVGAMFVGGEMLRSSYNEIRGTLDGMTNNSQEWKDDGFGSQQEDRRNRGNKDR-DDGVDRNVIVALEGQVTEMSKL
        MEQFYFGLS++T Q+   +F GG MLRSSYN+I+  LD M +NSQEW+D+ FGS+ + R  +GN+ R +DG+D +++VAL+GQV EM+ L
Subjt:  MEQFYFGLSEDTQQTVGAMFVGGEMLRSSYNEIRGTLDGMTNNSQEWKDDGFGSQQEDRRNRGNKDR-DDGVDRNVIVALEGQVTEMSKL

A0A5D3CV99 Uncharacterized protein3.5e-4098.86Show/hide
Query:  QFYFGLSEDTQQTVGAMFVGGEMLRSSYNEIRGTLDGMTNNSQEWKDDGFGSQQEDRRNRGNKDRDDGVDRNVIVALEGQVTEMSKLL
        +FYFGLSEDTQQTVGAMFVGGEMLRSSYNEIRGTLDGMTNNSQEWKDDGFGSQQEDRRNRGNKDRDDGVDRNVIVALEGQVTEMSKLL
Subjt:  QFYFGLSEDTQQTVGAMFVGGEMLRSSYNEIRGTLDGMTNNSQEWKDDGFGSQQEDRRNRGNKDRDDGVDRNVIVALEGQVTEMSKLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCAGTTCTATTTTGGATTGAGTGAAGATACACAACAGACTGTTGGGGCTATGTTTGTAGGTGGGGAAATGCTTAGAAGTTCCTATAACGAGATCAGGGGTACGCT
GGATGGTATGACCAACAACAGTCAAGAATGGAAGGATGACGGTTTTGGTTCGCAACAGGAAGATAGAAGAAATAGAGGAAACAAAGATAGAGATGATGGAGTGGATAGAA
ATGTTATAGTGGCACTGGAAGGACAAGTCACCGAAATGAGCAAGCTGCTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGCAGTTCTATTTTGGATTGAGTGAAGATACACAACAGACTGTTGGGGCTATGTTTGTAGGTGGGGAAATGCTTAGAAGTTCCTATAACGAGATCAGGGGTACGCT
GGATGGTATGACCAACAACAGTCAAGAATGGAAGGATGACGGTTTTGGTTCGCAACAGGAAGATAGAAGAAATAGAGGAAACAAAGATAGAGATGATGGAGTGGATAGAA
ATGTTATAGTGGCACTGGAAGGACAAGTCACCGAAATGAGCAAGCTGCTCTAA
Protein sequenceShow/hide protein sequence
MEQFYFGLSEDTQQTVGAMFVGGEMLRSSYNEIRGTLDGMTNNSQEWKDDGFGSQQEDRRNRGNKDRDDGVDRNVIVALEGQVTEMSKLL