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IVF0000913 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0000913
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein, putative, Ty3-gypsy subclass
Genome locationchr01:24471990..24472193
RNA-Seq ExpressionIVF0000913
SyntenyIVF0000913
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032063.1 hypothetical protein E6C27_scaffold223G00270 [Cucumis melo var. makuwa]4.96e-0752.17Show/hide
Query:  HKNIGNSGKYVENTIFDVKSCIGKTVGRNTSKDLFPMRHQQGVRNT
        HK +G + KYVE    DV++ +GK VGRNTS++ FP ++Q GVR T
Subjt:  HKNIGNSGKYVENTIFDVKSCIGKTVGRNTSKDLFPMRHQQGVRNT

KAA0037655.1 hypothetical protein E6C27_scaffold277G003180 [Cucumis melo var. makuwa]1.56e-0650Show/hide
Query:  GLFPTHKNIGNSGKYVENTIFDVKSCIGKTVGRNTSKDLFPMRHQQGV
        G+ PT KN+G + KYV  T  DV + +GK VGRN S + FP  +Q+GV
Subjt:  GLFPTHKNIGNSGKYVENTIFDVKSCIGKTVGRNTSKDLFPMRHQQGV

KAA0038928.1 retrotransposon protein, putative, Ty3-gypsy subclass [Cucumis melo var. makuwa]3.40e-0850Show/hide
Query:  MGLFPTHKNIGNSGKYVENTIFDVKSCIGKTVGRNTSKDLFPMRHQQGVRNTLLPSSS
        +G    HK +  SGK V N I D +  +  T+ RNTS+D FP  HQQGV NT LP+SS
Subjt:  MGLFPTHKNIGNSGKYVENTIFDVKSCIGKTVGRNTSKDLFPMRHQQGVRNTLLPSSS

KAA0039107.1 hypothetical protein E6C27_scaffold84G002100 [Cucumis melo var. makuwa]1.56e-1052.46Show/hide
Query:  HKNIGNSGKYVENTIFDVKSCIGKTVGRNTSKDLFPMRHQQGVRNTLLPSSSFLTLLMRQE
        HKN+  SGK +   I +V+S I K VGRN   + FPM HQQG+ N LLP+SS LT  MR++
Subjt:  HKNIGNSGKYVENTIFDVKSCIGKTVGRNTSKDLFPMRHQQGVRNTLLPSSSFLTLLMRQE

KAA0045130.1 hypothetical protein E6C27_scaffold30G001290 [Cucumis melo var. makuwa]1.59e-0651.02Show/hide
Query:  GLFPTHKNIGNSGKYVENTIFDVKSCIGKTVGRNTSKDLFPMRHQQGVR
        G+ PTHKN+G S KYV     DV   +G  VGRN S ++FP  +Q GVR
Subjt:  GLFPTHKNIGNSGKYVENTIFDVKSCIGKTVGRNTSKDLFPMRHQQGVR

TrEMBL top hitse value%identityAlignment
A0A5A7SP10 Uncharacterized protein1.7e-0452.17Show/hide
Query:  HKNIGNSGKYVENTIFDVKSCIGKTVGRNTSKDLFPMRHQQGVRNT
        HK +G + KYVE    DV++ +GK VGRNTS++ FP ++Q GVR T
Subjt:  HKNIGNSGKYVENTIFDVKSCIGKTVGRNTSKDLFPMRHQQGVRNT

A0A5A7SVV0 Transcription factor HBP-1b(C38)-like2.3e-0447.92Show/hide
Query:  GLFPTHKNIGNSGKYVENTIFDVKSCIGKTVGRNTSKDLFPMRHQQGV
        G+ PTHK +G + KYVE    DV++ +GK VG N S++ FP  +Q GV
Subjt:  GLFPTHKNIGNSGKYVENTIFDVKSCIGKTVGRNTSKDLFPMRHQQGV

A0A5A7T7S7 Retrotransposon protein, putative, Ty3-gypsy subclass5.4e-0645.59Show/hide
Query:  MGLFPTHKNIGNSGKYVENTIFDVKSCIGKTVGRNTSKDLFPMRHQQGVRNTLLPSSSF-LTLLMRQE
        +G    HK +  SGK V N I D +  +  T+ RNTS+D FP  HQQGV NT LP+SS  ++ + RQ+
Subjt:  MGLFPTHKNIGNSGKYVENTIFDVKSCIGKTVGRNTSKDLFPMRHQQGVRNTLLPSSSF-LTLLMRQE

A0A5A7TBZ3 Uncharacterized protein4.9e-0752.46Show/hide
Query:  HKNIGNSGKYVENTIFDVKSCIGKTVGRNTSKDLFPMRHQQGVRNTLLPSSSFLTLLMRQE
        HKN+  SGK +   I +V+S I K VGRN   + FPM HQQG+ N LLP+SS LT  MR++
Subjt:  HKNIGNSGKYVENTIFDVKSCIGKTVGRNTSKDLFPMRHQQGVRNTLLPSSSFLTLLMRQE

A0A5A7TPM2 Uncharacterized protein1.3e-0451.02Show/hide
Query:  GLFPTHKNIGNSGKYVENTIFDVKSCIGKTVGRNTSKDLFPMRHQQGVR
        G+ PTHKN+G S KYV     DV   +G  VGRN S ++FP  +Q GVR
Subjt:  GLFPTHKNIGNSGKYVENTIFDVKSCIGKTVGRNTSKDLFPMRHQQGVR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGCTATTCCCGACGCACAAAAATATCGGGAATAGTGGAAAATACGTTGAGAACACAATTTTCGACGTAAAATCGTGCATCGGGAAGACCGTCGGAAGAAACACATC
GAAAGACCTTTTCCCGATGCGTCACCAACAAGGAGTCAGGAATACCCTTCTCCCGTCGTCATCTTTTCTGACGTTGTTGATGCGTCAGGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGCTATTCCCGACGCACAAAAATATCGGGAATAGTGGAAAATACGTTGAGAACACAATTTTCGACGTAAAATCGTGCATCGGGAAGACCGTCGGAAGAAACACATC
GAAAGACCTTTTCCCGATGCGTCACCAACAAGGAGTCAGGAATACCCTTCTCCCGTCGTCATCTTTTCTGACGTTGTTGATGCGTCAGGAATAA
Protein sequenceShow/hide protein sequence
MGLFPTHKNIGNSGKYVENTIFDVKSCIGKTVGRNTSKDLFPMRHQQGVRNTLLPSSSFLTLLMRQE