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IVF0000933 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0000933
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag-pro-like protein
Genome locationchr01:23616825..23617217
RNA-Seq ExpressionIVF0000933
SyntenyIVF0000933
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025555.1 uncharacterized protein E6C27_scaffold253G00440 [Cucumis melo var. makuwa]7.91e-8394.62Show/hide
Query:  MNTLFQILRGAGYLSLRFNNDEEEKFGCANEKQCLFHPEIDDHFIEDCCELKNEVLKLMDAKILLVGQVSMQEIKVDMIIDKETSNDTSITVISENTISP
        MNTLFQILR AGYLS RFNNDE EKFGCANEKQCLFH EIDDHFIEDCCELKNEV KLMDAKILLVGQVSMQEI+VDMIIDKETSNDTSIT+ISENTISP
Subjt:  MNTLFQILRGAGYLSLRFNNDEEEKFGCANEKQCLFHPEIDDHFIEDCCELKNEVLKLMDAKILLVGQVSMQEIKVDMIIDKETSNDTSITVISENTISP

Query:  NLLVYQCPPKFELNNWEIKRTLKVSKGSQK
        NLLVYQCPPKFELNNWEIKRTLKVSKGSQK
Subjt:  NLLVYQCPPKFELNNWEIKRTLKVSKGSQK

KAA0026188.1 uncharacterized protein E6C27_scaffold19G001530 [Cucumis melo var. makuwa]4.40e-89100Show/hide
Query:  MNTLFQILRGAGYLSLRFNNDEEEKFGCANEKQCLFHPEIDDHFIEDCCELKNEVLKLMDAKILLVGQVSMQEIKVDMIIDKETSNDTSITVISENTISP
        MNTLFQILRGAGYLSLRFNNDEEEKFGCANEKQCLFHPEIDDHFIEDCCELKNEVLKLMDAKILLVGQVSMQEIKVDMIIDKETSNDTSITVISENTISP
Subjt:  MNTLFQILRGAGYLSLRFNNDEEEKFGCANEKQCLFHPEIDDHFIEDCCELKNEVLKLMDAKILLVGQVSMQEIKVDMIIDKETSNDTSITVISENTISP

Query:  NLLVYQCPPKFELNNWEIKRTLKVSKGSQK
        NLLVYQCPPKFELNNWEIKRTLKVSKGSQK
Subjt:  NLLVYQCPPKFELNNWEIKRTLKVSKGSQK

KAA0050802.1 Gag-pro-like protein [Cucumis melo var. makuwa]1.98e-8193.08Show/hide
Query:  MNTLFQILRGAGYLSLRFNNDEEEKFGCANEKQCLFHPEIDDHFIEDCCELKNEVLKLMDAKILLVGQVSMQEIKVDMIIDKETSNDTSITVISENTISP
        MNTLFQILRGAGYLS RFNNDE EKFGCANEKQCLFHPEIDDHFIEDCCE KNEV KLMDAKILLVGQ+SMQEI+VD+IIDK+TSNDTSITVISENTISP
Subjt:  MNTLFQILRGAGYLSLRFNNDEEEKFGCANEKQCLFHPEIDDHFIEDCCELKNEVLKLMDAKILLVGQVSMQEIKVDMIIDKETSNDTSITVISENTISP

Query:  NLLVYQCPPKFELNNWEIKRTLKVSKGSQK
        NLLVYQCPPKFELNNWEIKRTLKV KGSQK
Subjt:  NLLVYQCPPKFELNNWEIKRTLKVSKGSQK

KAA0063108.1 uncharacterized protein E6C27_scaffold1337G00160 [Cucumis melo var. makuwa]7.01e-7789.23Show/hide
Query:  MNTLFQILRGAGYLSLRFNNDEEEKFGCANEKQCLFHPEIDDHFIEDCCELKNEVLKLMDAKILLVGQVSMQEIKVDMIIDKETSNDTSITVISENTISP
        MNTLFQILR AGYLS RFNND+ EKFGCANEKQCLFHPEIDDHFI+DCCE KNEV KLMDAKIL VGQ+SMQ+I+VDMIIDKETSNDTSITVIS+NTISP
Subjt:  MNTLFQILRGAGYLSLRFNNDEEEKFGCANEKQCLFHPEIDDHFIEDCCELKNEVLKLMDAKILLVGQVSMQEIKVDMIIDKETSNDTSITVISENTISP

Query:  NLLVYQCPPKFELNNWEIKRTLKVSKGSQK
        NLLV Q PPKFELNNWEIKRTLKVSKGSQK
Subjt:  NLLVYQCPPKFELNNWEIKRTLKVSKGSQK

TYK00168.1 putative RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H [Cucumis melo var. makuwa]7.83e-7589.15Show/hide
Query:  MNTLFQILRGAGYLSLRFNNDEEEKFGCANEKQCLFHPEIDDHFIEDCCELKNEVLKLMDAKILLVGQVSMQEIKVDMIIDKETSNDTSITVISENTISP
        MNTLFQILR AGYLS RFNND+ EKFGCANEKQCLFHPEIDDHFI+DCCE KNEV KLMDAKIL VGQ+SMQ+I+VDMIIDKETSNDTSITVIS+NTISP
Subjt:  MNTLFQILRGAGYLSLRFNNDEEEKFGCANEKQCLFHPEIDDHFIEDCCELKNEVLKLMDAKILLVGQVSMQEIKVDMIIDKETSNDTSITVISENTISP

Query:  NLLVYQCPPKFELNNWEIKRTLKVSKGSQ
        NLLV Q PPKFELNNWEIKRTLKVSKGSQ
Subjt:  NLLVYQCPPKFELNNWEIKRTLKVSKGSQ

TrEMBL top hitse value%identityAlignment
A0A1S4E534 uncharacterized protein LOC1035028381.9e-6092.31Show/hide
Query:  MNTLFQILRGAGYLSLRFNNDEEEKFGCANEKQCLFHPEIDDHFIEDCCELKNEVLKLMDAKILLVGQVSMQEIKVDMIIDKETSNDTSITVISENTISP
        MNTLFQIL  AGYLS RFNNDE  KFGCANEKQCLFHPEIDDHFIEDCCE KNEV KLMDAKILLVGQVS+QEI+VDMIIDKETSNDTSIT+ISENTISP
Subjt:  MNTLFQILRGAGYLSLRFNNDEEEKFGCANEKQCLFHPEIDDHFIEDCCELKNEVLKLMDAKILLVGQVSMQEIKVDMIIDKETSNDTSITVISENTISP

Query:  NLLVYQCPPKFELNNWEIKRTLKVSKGSQK
        NLLVYQCPPKFELNNWEIKRTLKVSKGSQK
Subjt:  NLLVYQCPPKFELNNWEIKRTLKVSKGSQK

A0A5A7SM74 Uncharacterized protein2.7e-6294.62Show/hide
Query:  MNTLFQILRGAGYLSLRFNNDEEEKFGCANEKQCLFHPEIDDHFIEDCCELKNEVLKLMDAKILLVGQVSMQEIKVDMIIDKETSNDTSITVISENTISP
        MNTLFQILR AGYLS RFNNDE EKFGCANEKQCLFH EIDDHFIEDCCELKNEV KLMDAKILLVGQVSMQEI+VDMIIDKETSNDTSIT+ISENTISP
Subjt:  MNTLFQILRGAGYLSLRFNNDEEEKFGCANEKQCLFHPEIDDHFIEDCCELKNEVLKLMDAKILLVGQVSMQEIKVDMIIDKETSNDTSITVISENTISP

Query:  NLLVYQCPPKFELNNWEIKRTLKVSKGSQK
        NLLVYQCPPKFELNNWEIKRTLKVSKGSQK
Subjt:  NLLVYQCPPKFELNNWEIKRTLKVSKGSQK

A0A5A7T401 Retrotrans_gag domain-containing protein1.9e-6092.31Show/hide
Query:  MNTLFQILRGAGYLSLRFNNDEEEKFGCANEKQCLFHPEIDDHFIEDCCELKNEVLKLMDAKILLVGQVSMQEIKVDMIIDKETSNDTSITVISENTISP
        MNTLFQIL  AGYLS RFNNDE  KFGCANEKQCLFHPEIDDHFIEDCCE KNEV KLMDAKILLVGQVS+QEI+VDMIIDKETSNDTSIT+ISENTISP
Subjt:  MNTLFQILRGAGYLSLRFNNDEEEKFGCANEKQCLFHPEIDDHFIEDCCELKNEVLKLMDAKILLVGQVSMQEIKVDMIIDKETSNDTSITVISENTISP

Query:  NLLVYQCPPKFELNNWEIKRTLKVSKGSQK
        NLLVYQCPPKFELNNWEIKRTLKVSKGSQK
Subjt:  NLLVYQCPPKFELNNWEIKRTLKVSKGSQK

A0A5D3C9I5 Gag-pro-like protein7.9e-6293.08Show/hide
Query:  MNTLFQILRGAGYLSLRFNNDEEEKFGCANEKQCLFHPEIDDHFIEDCCELKNEVLKLMDAKILLVGQVSMQEIKVDMIIDKETSNDTSITVISENTISP
        MNTLFQILRGAGYLS RFNNDE EKFGCANEKQCLFHPEIDDHFIEDCCE KNEV KLMDAKILLVGQ+SMQEI+VD+IIDK+TSNDTSITVISENTISP
Subjt:  MNTLFQILRGAGYLSLRFNNDEEEKFGCANEKQCLFHPEIDDHFIEDCCELKNEVLKLMDAKILLVGQVSMQEIKVDMIIDKETSNDTSITVISENTISP

Query:  NLLVYQCPPKFELNNWEIKRTLKVSKGSQK
        NLLVYQCPPKFELNNWEIKRTLKV KGSQK
Subjt:  NLLVYQCPPKFELNNWEIKRTLKVSKGSQK

A0A5D3E596 Uncharacterized protein4.8e-67100Show/hide
Query:  MNTLFQILRGAGYLSLRFNNDEEEKFGCANEKQCLFHPEIDDHFIEDCCELKNEVLKLMDAKILLVGQVSMQEIKVDMIIDKETSNDTSITVISENTISP
        MNTLFQILRGAGYLSLRFNNDEEEKFGCANEKQCLFHPEIDDHFIEDCCELKNEVLKLMDAKILLVGQVSMQEIKVDMIIDKETSNDTSITVISENTISP
Subjt:  MNTLFQILRGAGYLSLRFNNDEEEKFGCANEKQCLFHPEIDDHFIEDCCELKNEVLKLMDAKILLVGQVSMQEIKVDMIIDKETSNDTSITVISENTISP

Query:  NLLVYQCPPKFELNNWEIKRTLKVSKGSQK
        NLLVYQCPPKFELNNWEIKRTLKVSKGSQK
Subjt:  NLLVYQCPPKFELNNWEIKRTLKVSKGSQK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATACACTTTTCCAAATCCTTCGTGGAGCTGGATATTTGTCACTAAGGTTTAACAATGATGAGGAGGAGAAGTTTGGATGCGCCAACGAGAAGCAGTGTTTATTCCA
CCCTGAGATAGATGACCATTTCATTGAAGATTGTTGTGAGCTCAAGAATGAGGTACTAAAGTTGATGGATGCAAAGATTCTATTGGTAGGACAAGTGAGCATGCAAGAAA
TCAAGGTCGATATGATTATTGATAAGGAAACTTCAAATGATACCTCAATTACGGTTATCTCCGAGAATACTATTTCGCCTAATCTATTGGTTTATCAGTGTCCACCAAAA
TTTGAGTTGAACAATTGGGAGATCAAGAGGACGCTAAAAGTCTCTAAAGGATCACAAAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATACACTTTTCCAAATCCTTCGTGGAGCTGGATATTTGTCACTAAGGTTTAACAATGATGAGGAGGAGAAGTTTGGATGCGCCAACGAGAAGCAGTGTTTATTCCA
CCCTGAGATAGATGACCATTTCATTGAAGATTGTTGTGAGCTCAAGAATGAGGTACTAAAGTTGATGGATGCAAAGATTCTATTGGTAGGACAAGTGAGCATGCAAGAAA
TCAAGGTCGATATGATTATTGATAAGGAAACTTCAAATGATACCTCAATTACGGTTATCTCCGAGAATACTATTTCGCCTAATCTATTGGTTTATCAGTGTCCACCAAAA
TTTGAGTTGAACAATTGGGAGATCAAGAGGACGCTAAAAGTCTCTAAAGGATCACAAAAGTAA
Protein sequenceShow/hide protein sequence
MNTLFQILRGAGYLSLRFNNDEEEKFGCANEKQCLFHPEIDDHFIEDCCELKNEVLKLMDAKILLVGQVSMQEIKVDMIIDKETSNDTSITVISENTISPNLLVYQCPPK
FELNNWEIKRTLKVSKGSQK