; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0000946 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0000946
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionATP-dependent DNA helicase
Genome locationchr02:10968407..10968757
RNA-Seq ExpressionIVF0000946
SyntenyIVF0000946
Gene Ontology termsGO:0000723 - telomere maintenance (biological process)
GO:0006281 - DNA repair (biological process)
GO:0006310 - DNA recombination (biological process)
GO:0032508 - DNA duplex unwinding (biological process)
GO:0003678 - DNA helicase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
InterPro domainsIPR010285 - DNA helicase Pif1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008454685.1 PREDICTED: ATP-dependent DNA helicase PIF1-like [Cucumis melo]9.84e-3467Show/hide
Query:  MDCPHPFGGKVIVFGGDFRQVLPVLPKGTRQQTMAV--------------------DGNEPIIKDDIIKLLEEIVVANDSRNDAKGIFIRKIYPDLELHT
        MD  HPFGGK IVFGGDFRQ L VLPKGTRQQT+A+                    DGN+PIIKDDIIKL E+IVVAN+S NDAKGIFIRKIYPDLELH 
Subjt:  MDCPHPFGGKVIVFGGDFRQVLPVLPKGTRQQTMAV--------------------DGNEPIIKDDIIKLLEEIVVANDSRNDAKGIFIRKIYPDLELHT

XP_016498555.1 PREDICTED: ATP-dependent DNA helicase PIF1-like [Nicotiana tabacum]4.03e-1538.94Show/hide
Query:  MDCPHPFGGKVIVFGGDFRQVLPVLPKGTRQQTMAV------------------------------------DGNEPIIKDDIIKLLEEIVVANDSRNDA
        MD   PFGGKV+VFGGDFRQVLPV+PK TR +T+                                      DG EP I+D++++L EEIVV + + + A
Subjt:  MDCPHPFGGKVIVFGGDFRQVLPVLPKGTRQQTMAV------------------------------------DGNEPIIKDDIIKLLEEIVVANDSRNDA

Query:  KGIFIRKIYPDLE
        K   IR+I+P L+
Subjt:  KGIFIRKIYPDLE

XP_016552692.1 PREDICTED: uncharacterized protein LOC107852150 [Capsicum annuum]1.30e-1546.15Show/hide
Query:  MDCPHPFGGKVIVFGGDFRQVLPVLPKGTRQQTM-AVDGNEPIIKDDIIKLLEEIVVANDSRNDAKGIFIRKIYPDLE
        +D   PFGGKV++FGGDFRQVLPV+PK TR + + A +G EP I+DD++ L +++V+   S        I +I P L+
Subjt:  MDCPHPFGGKVIVFGGDFRQVLPVLPKGTRQQTM-AVDGNEPIIKDDIIKLLEEIVVANDSRNDAKGIFIRKIYPDLE

XP_016902602.1 PREDICTED: ATP-dependent DNA helicase PIF1-like [Cucumis melo]7.00e-3963.79Show/hide
Query:  MDCPHPFGGKVIVFGGDFRQVLPVLPKGTRQQTMAV------------------------------------DGNEPIIKDDIIKLLEEIVVANDSRNDA
        MDCPHPFGGKVIVFGGDFRQVLPVLPKGTRQQT+AV                                    DGNE IIKDDIIKLLE+IVVANDS NDA
Subjt:  MDCPHPFGGKVIVFGGDFRQVLPVLPKGTRQQTMAV------------------------------------DGNEPIIKDDIIKLLEEIVVANDSRNDA

Query:  KGIFIRKIYPDLELHT
        KGIFIRKIY DLELH 
Subjt:  KGIFIRKIYPDLELHT

XP_022156991.1 uncharacterized protein LOC111023820 [Momordica charantia]5.40e-1586.11Show/hide
Query:  MDCPHPFGGKVIVFGGDFRQVLPVLPKGTRQQTMAV
        MDCP PFGGK+I+FGGDFRQVLPVLPKGTRQQT+A+
Subjt:  MDCPHPFGGKVIVFGGDFRQVLPVLPKGTRQQTMAV

TrEMBL top hitse value%identityAlignment
A0A1S3BZY9 ATP-dependent DNA helicase1.5e-2667.68Show/hide
Query:  MDCPHPFGGKVIVFGGDFRQVLPVLPKGTRQQTMAV--------------------DGNEPIIKDDIIKLLEEIVVANDSRNDAKGIFIRKIYPDLELH
        MD  HPFGGK IVFGGDFRQ L VLPKGTRQQT+A+                    DGN+PIIKDDIIKL E+IVVAN+S NDAKGIFIRKIYPDLELH
Subjt:  MDCPHPFGGKVIVFGGDFRQVLPVLPKGTRQQTMAV--------------------DGNEPIIKDDIIKLLEEIVVANDSRNDAKGIFIRKIYPDLELH

A0A1S4CBN9 ATP-dependent DNA helicase7.9e-1238.94Show/hide
Query:  MDCPHPFGGKVIVFGGDFRQVLPVLPKGTRQQTMAV------------------------------------DGNEPIIKDDIIKLLEEIVVANDSRNDA
        MD   PFGGKV+VFGGDFRQVLPV+PK TR +T+                                      DG EP I+D++++L EEIVV + + + A
Subjt:  MDCPHPFGGKVIVFGGDFRQVLPVLPKGTRQQTMAV------------------------------------DGNEPIIKDDIIKLLEEIVVANDSRNDA

Query:  KGIFIRKIYPDLE
        K   IR+I+P L+
Subjt:  KGIFIRKIYPDLE

A0A1S4E300 ATP-dependent DNA helicase1.4e-2964.35Show/hide
Query:  MDCPHPFGGKVIVFGGDFRQVLPVLPKGTRQQTMAV------------------------------------DGNEPIIKDDIIKLLEEIVVANDSRNDA
        MDCPHPFGGKVIVFGGDFRQVLPVLPKGTRQQT+AV                                    DGNE IIKDDIIKLLE+IVVANDS NDA
Subjt:  MDCPHPFGGKVIVFGGDFRQVLPVLPKGTRQQTMAV------------------------------------DGNEPIIKDDIIKLLEEIVVANDSRNDA

Query:  KGIFIRKIYPDLELH
        KGIFIRKIY DLELH
Subjt:  KGIFIRKIYPDLELH

A0A1U7WW73 ATP-dependent DNA helicase2.3e-1151.32Show/hide
Query:  MDCPHPFGGKVIVFGGDFRQVLPVLPKGTRQQTMAVDGNEPIIKDDIIKLLEEIVVANDSRNDAKGIFIRKIYPDL
        MD   PFGGKV+VFGGDFRQVLPV+PK TR +T  V+ +   IKDD+I L E++V+  +     +   I KI+P L
Subjt:  MDCPHPFGGKVIVFGGDFRQVLPVLPKGTRQQTMAVDGNEPIIKDDIIKLLEEIVVANDSRNDAKGIFIRKIYPDL

A0A5A7TPT8 ATP-dependent DNA helicase1.4e-2964.35Show/hide
Query:  MDCPHPFGGKVIVFGGDFRQVLPVLPKGTRQQTMAV------------------------------------DGNEPIIKDDIIKLLEEIVVANDSRNDA
        MDCPHPFGGKVIVFGGDFRQVLPVLPKGTRQQT+AV                                    DGNE IIKDDIIKLLE+IVVANDS NDA
Subjt:  MDCPHPFGGKVIVFGGDFRQVLPVLPKGTRQQTMAV------------------------------------DGNEPIIKDDIIKLLEEIVVANDSRNDA

Query:  KGIFIRKIYPDLELH
        KGIFIRKIY DLELH
Subjt:  KGIFIRKIYPDLELH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTGTCCCCACCCATTTGGAGGTAAAGTAATTGTCTTTGGAGGTGATTTTCGTCAAGTGCTTCCAGTGCTTCCTAAAGGAACAAGACAACAAACAATGGCA
GTAGATGGAAACGAGCCCATCATCAAAGATGATATCATTAAATTGCTTGAGGAAATTGTAGTTGCAAATGATTCTAGAAATGATGCAAAAGGGATATTCATTAGG
AAAATCTATCCTGATCTAGAACTACATACATGA
mRNA sequenceShow/hide mRNA sequence
ATGGATTGTCCCCACCCATTTGGAGGTAAAGTAATTGTCTTTGGAGGTGATTTTCGTCAAGTGCTTCCAGTGCTTCCTAAAGGAACAAGACAACAAACAATGGCA
GTAGATGGAAACGAGCCCATCATCAAAGATGATATCATTAAATTGCTTGAGGAAATTGTAGTTGCAAATGATTCTAGAAATGATGCAAAAGGGATATTCATTAGG
AAAATCTATCCTGATCTAGAACTACATACATGA
Protein sequenceShow/hide protein sequence
MDCPHPFGGKVIVFGGDFRQVLPVLPKGTRQQTMAVDGNEPIIKDDIIKLLEEIVVANDSRNDAKGIFIRKIYPDLELHT