; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0000980 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0000980
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionWD_REPEATS_REGION domain-containing protein
Genome locationchr07:19637210..19641621
RNA-Seq ExpressionIVF0000980
SyntenyIVF0000980
Gene Ontology termsGO:0015031 - protein transport (biological process)
GO:0034198 - cellular response to amino acid starvation (biological process)
GO:1904263 - positive regulation of TORC1 signaling (biological process)
GO:0031080 - nuclear pore outer ring (cellular component)
GO:0035859 - Seh1-associated complex (cellular component)
GO:0005198 - structural molecule activity (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR001680 - WD40 repeat
IPR015943 - WD40/YVTN repeat-like-containing domain superfamily
IPR036322 - WD40-repeat-containing domain superfamily
IPR037363 - Sec13/Seh1 family
IPR037597 - Nucleoporin Seh1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044921.1 protein SEH1 [Cucumis melo var. makuwa]2.15e-21793.25Show/hide
Query:  MEKAMATFDKGTLCSAWNHSSSRLATASSDGTLVIFDSPHPSSSSTSLTRTSNFKAHEAAITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLEWK
        MEKAMATFDKGTLCSAWNHSSSRLATASSDGTL                      AHEAAITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLEWK
Subjt:  MEKAMATFDKGTLCSAWNHSSSRLATASSDGTLVIFDSPHPSSSSTSLTRTSNFKAHEAAITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLEWK

Query:  LCKLFKSNSSQILDLQFGNSSSGLKMIAAFSDGYIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGEQQSSFVLAFSSNTPQLN
        LCKLFKSNSSQILDLQFGNSSSGLKMIAAFSDGYIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGEQQSSFVLAFSSNTPQLN
Subjt:  LCKLFKSNSSQILDLQFGNSSSGLKMIAAFSDGYIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGEQQSSFVLAFSSNTPQLN

Query:  SAKVWEFDQAHQRWLPVAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQRGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTG
        SAKVWEFDQAHQRWLPVAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQRGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTG
Subjt:  SAKVWEFDQAHQRWLPVAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQRGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTG

Query:  KDGMVRLWQSNLNGVWHQHAAFEPTS
        KDGMVRLWQSNLNGVWHQHAAFEPTS
Subjt:  KDGMVRLWQSNLNGVWHQHAAFEPTS

XP_004149752.1 protein SEH1 [Cucumis sativus]7.34e-22895.71Show/hide
Query:  MEKAMATFDKGTLCSAWNHSSSRLATASSDGTLVIFDSPHPSSSSTSLTRTSNFKAHEAAITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLEWK
        MEKAMATF KGTLCSAWN+SS+RLATASSDGTLVIFDSPHPSSSSTS T TSNFKAHE AITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPL+WK
Subjt:  MEKAMATFDKGTLCSAWNHSSSRLATASSDGTLVIFDSPHPSSSSTSLTRTSNFKAHEAAITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLEWK

Query:  LCKLFKSNSSQILDLQFGNSSSGLKMIAAFSDGYIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGEQQSSFVLAFSSNTPQLN
        LCKLFKSNSSQILDLQFGNSSSGLKMIAAFSDGYIKVYELMDPL+LK+WQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGEQQSSFV+AFSSNTPQLN
Subjt:  LCKLFKSNSSQILDLQFGNSSSGLKMIAAFSDGYIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGEQQSSFVLAFSSNTPQLN

Query:  SAKVWEFDQAHQRWLPVAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQRGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTG
        SAKVWEFDQAH RWLPVAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQRGIAIW LGLSPD DGRLS ERVALLSGHNGEVWEMEWDMGGMTLASTG
Subjt:  SAKVWEFDQAHQRWLPVAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQRGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTG

Query:  KDGMVRLWQSNLNGVWHQHAAFEPTS
        KDGMVRLWQSNLNGVWHQHAAFEPTS
Subjt:  KDGMVRLWQSNLNGVWHQHAAFEPTS

XP_008451932.1 PREDICTED: protein SEH1 [Cucumis melo]6.37e-238100Show/hide
Query:  MEKAMATFDKGTLCSAWNHSSSRLATASSDGTLVIFDSPHPSSSSTSLTRTSNFKAHEAAITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLEWK
        MEKAMATFDKGTLCSAWNHSSSRLATASSDGTLVIFDSPHPSSSSTSLTRTSNFKAHEAAITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLEWK
Subjt:  MEKAMATFDKGTLCSAWNHSSSRLATASSDGTLVIFDSPHPSSSSTSLTRTSNFKAHEAAITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLEWK

Query:  LCKLFKSNSSQILDLQFGNSSSGLKMIAAFSDGYIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGEQQSSFVLAFSSNTPQLN
        LCKLFKSNSSQILDLQFGNSSSGLKMIAAFSDGYIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGEQQSSFVLAFSSNTPQLN
Subjt:  LCKLFKSNSSQILDLQFGNSSSGLKMIAAFSDGYIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGEQQSSFVLAFSSNTPQLN

Query:  SAKVWEFDQAHQRWLPVAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQRGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTG
        SAKVWEFDQAHQRWLPVAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQRGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTG
Subjt:  SAKVWEFDQAHQRWLPVAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQRGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTG

Query:  KDGMVRLWQSNLNGVWHQHAAFEPTS
        KDGMVRLWQSNLNGVWHQHAAFEPTS
Subjt:  KDGMVRLWQSNLNGVWHQHAAFEPTS

XP_022136602.1 protein SEH1 [Momordica charantia]1.97e-21490.83Show/hide
Query:  MEKAMATFDKGTLCSAWNHSSSRLATASSDGTLVIFDSPHPSSSSTSLTRTSNFKAHEAAITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLEWK
        ME AMA+FDKGTLCSAWN+S+SRLATAS DGTLVIFDSP PSSSSTSLTRTSNFKAHEAAI KIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPL+WK
Subjt:  MEKAMATFDKGTLCSAWNHSSSRLATASSDGTLVIFDSPHPSSSSTSLTRTSNFKAHEAAITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLEWK

Query:  LCKLFKSNSSQILDLQFGNSSSGLKMIAAFSDGYIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGE-QQSSFVLAFSSNTPQL
        LCK FKSNS+Q+LD+QFGNSSSGLKMIAAFS  ++KVYELMDPLDLK+WQLQAEFQNVIDSISTVRK+SC SASISWNPHRGE QQSSFVLA +SNTPQL
Subjt:  LCKLFKSNSSQILDLQFGNSSSGLKMIAAFSDGYIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGE-QQSSFVLAFSSNTPQL

Query:  NSAKVWEFDQAHQRWLPVAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQRGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST
        NSAKVWEFDQAHQRWLPVAELAL A+KGDEVYAVAWAQNIGRPYEVIAVATQ+GIAIW LG +PD DGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST
Subjt:  NSAKVWEFDQAHQRWLPVAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQRGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGVWHQHAAFEPTS
        GKDGMVRLWQSNLNGVWHQ AAFEPTS
Subjt:  GKDGMVRLWQSNLNGVWHQHAAFEPTS

XP_038897768.1 protein SEH1 [Benincasa hispida]1.12e-22293.25Show/hide
Query:  MEKAMATFDKGTLCSAWNHSSSRLATASSDGTLVIFDSPHPSSSSTSLTRTSNFKAHEAAITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLEWK
        MEKAMAT  KGTLCSAWN+S++RLAT S+DGTL+IFDSP PSSSSTSLTRTSNFK HEAAI KIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPL+WK
Subjt:  MEKAMATFDKGTLCSAWNHSSSRLATASSDGTLVIFDSPHPSSSSTSLTRTSNFKAHEAAITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLEWK

Query:  LCKLFKSNSSQILDLQFGNSSSGLKMIAAFSDGYIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGEQQSSFVLAFSSNTPQLN
        LCK FK NSSQILD+QFGNSSSGLKMIAAFSDG+IKVYELMDPLDLKSWQLQAEFQNVIDSISTVRK+ CSSASISWNPHRGEQQ SFVLAFSSNTPQLN
Subjt:  LCKLFKSNSSQILDLQFGNSSSGLKMIAAFSDGYIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGEQQSSFVLAFSSNTPQLN

Query:  SAKVWEFDQAHQRWLPVAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQRGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTG
        SAKVWEFDQAHQRWLPVAELALTA+KGDEVYAVAWAQNIGRPYEVIAVATQ+GIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTG
Subjt:  SAKVWEFDQAHQRWLPVAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQRGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTG

Query:  KDGMVRLWQSNLNGVWHQHAAFEPTS
        KDGMVRLWQSNLNGVWHQHA FEPTS
Subjt:  KDGMVRLWQSNLNGVWHQHAAFEPTS

TrEMBL top hitse value%identityAlignment
A0A0A0KWZ8 WD_REPEATS_REGION domain-containing protein8.1e-18095.71Show/hide
Query:  MEKAMATFDKGTLCSAWNHSSSRLATASSDGTLVIFDSPHPSSSSTSLTRTSNFKAHEAAITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLEWK
        MEKAMATF KGTLCSAWN+SS+RLATASSDGTLVIFDSPHPSSSSTS T TSNFKAHE AITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPL+WK
Subjt:  MEKAMATFDKGTLCSAWNHSSSRLATASSDGTLVIFDSPHPSSSSTSLTRTSNFKAHEAAITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLEWK

Query:  LCKLFKSNSSQILDLQFGNSSSGLKMIAAFSDGYIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGEQQSSFVLAFSSNTPQLN
        LCKLFKSNSSQILDLQFGNSSSGLKMIAAFSDGYIKVYELMDPL+LK+WQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGEQQSSFV+AFSSNTPQLN
Subjt:  LCKLFKSNSSQILDLQFGNSSSGLKMIAAFSDGYIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGEQQSSFVLAFSSNTPQLN

Query:  SAKVWEFDQAHQRWLPVAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQRGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTG
        SAKVWEFDQAH RWLPVAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQRGIAIW LGLSPD DGRLS ERVALLSGHNGEVWEMEWDMGGMTLASTG
Subjt:  SAKVWEFDQAHQRWLPVAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQRGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTG

Query:  KDGMVRLWQSNLNGVWHQHAAFEPTS
        KDGMVRLWQSNLNGVWHQHAAFEPTS
Subjt:  KDGMVRLWQSNLNGVWHQHAAFEPTS

A0A1S3BTS7 protein SEH11.8e-187100Show/hide
Query:  MEKAMATFDKGTLCSAWNHSSSRLATASSDGTLVIFDSPHPSSSSTSLTRTSNFKAHEAAITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLEWK
        MEKAMATFDKGTLCSAWNHSSSRLATASSDGTLVIFDSPHPSSSSTSLTRTSNFKAHEAAITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLEWK
Subjt:  MEKAMATFDKGTLCSAWNHSSSRLATASSDGTLVIFDSPHPSSSSTSLTRTSNFKAHEAAITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLEWK

Query:  LCKLFKSNSSQILDLQFGNSSSGLKMIAAFSDGYIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGEQQSSFVLAFSSNTPQLN
        LCKLFKSNSSQILDLQFGNSSSGLKMIAAFSDGYIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGEQQSSFVLAFSSNTPQLN
Subjt:  LCKLFKSNSSQILDLQFGNSSSGLKMIAAFSDGYIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGEQQSSFVLAFSSNTPQLN

Query:  SAKVWEFDQAHQRWLPVAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQRGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTG
        SAKVWEFDQAHQRWLPVAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQRGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTG
Subjt:  SAKVWEFDQAHQRWLPVAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQRGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTG

Query:  KDGMVRLWQSNLNGVWHQHAAFEPTS
        KDGMVRLWQSNLNGVWHQHAAFEPTS
Subjt:  KDGMVRLWQSNLNGVWHQHAAFEPTS

A0A5A7TTR9 Protein SEH13.1e-17193.25Show/hide
Query:  MEKAMATFDKGTLCSAWNHSSSRLATASSDGTLVIFDSPHPSSSSTSLTRTSNFKAHEAAITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLEWK
        MEKAMATFDKGTLCSAWNHSSSRLATASSDGTL                      AHEAAITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLEWK
Subjt:  MEKAMATFDKGTLCSAWNHSSSRLATASSDGTLVIFDSPHPSSSSTSLTRTSNFKAHEAAITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLEWK

Query:  LCKLFKSNSSQILDLQFGNSSSGLKMIAAFSDGYIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGEQQSSFVLAFSSNTPQLN
        LCKLFKSNSSQILDLQFGNSSSGLKMIAAFSDGYIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGEQQSSFVLAFSSNTPQLN
Subjt:  LCKLFKSNSSQILDLQFGNSSSGLKMIAAFSDGYIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGEQQSSFVLAFSSNTPQLN

Query:  SAKVWEFDQAHQRWLPVAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQRGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTG
        SAKVWEFDQAHQRWLPVAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQRGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTG
Subjt:  SAKVWEFDQAHQRWLPVAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQRGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTG

Query:  KDGMVRLWQSNLNGVWHQHAAFEPTS
        KDGMVRLWQSNLNGVWHQHAAFEPTS
Subjt:  KDGMVRLWQSNLNGVWHQHAAFEPTS

A0A6J1C5X6 protein SEH11.3e-16990.83Show/hide
Query:  MEKAMATFDKGTLCSAWNHSSSRLATASSDGTLVIFDSPHPSSSSTSLTRTSNFKAHEAAITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLEWK
        ME AMA+FDKGTLCSAWN+S+SRLATAS DGTLVIFDSP PSSSSTSLTRTSNFKAHEAAI KIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPL+WK
Subjt:  MEKAMATFDKGTLCSAWNHSSSRLATASSDGTLVIFDSPHPSSSSTSLTRTSNFKAHEAAITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLEWK

Query:  LCKLFKSNSSQILDLQFGNSSSGLKMIAAFSDGYIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGE-QQSSFVLAFSSNTPQL
        LCK FKSNS+Q+LD+QFGNSSSGLKMIAAFS  ++KVYELMDPLDLK+WQLQAEFQNVIDSISTVRK+SC SASISWNPHRGE QQSSFVLA +SNTPQL
Subjt:  LCKLFKSNSSQILDLQFGNSSSGLKMIAAFSDGYIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGE-QQSSFVLAFSSNTPQL

Query:  NSAKVWEFDQAHQRWLPVAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQRGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST
        NSAKVWEFDQAHQRWLPVAELAL A+KGDEVYAVAWAQNIGRPYEVIAVATQ+GIAIW LG +PD DGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST
Subjt:  NSAKVWEFDQAHQRWLPVAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQRGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGVWHQHAAFEPTS
        GKDGMVRLWQSNLNGVWHQ AAFEPTS
Subjt:  GKDGMVRLWQSNLNGVWHQHAAFEPTS

A0A6J1FTY0 protein SEH14.1e-16889.6Show/hide
Query:  MEKAMATFDKGTLCSAWNHSSSRLATASSDGTLVIFDSPHPSSSSTSLTRTSNFKAHEAAITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLEWK
        MEKAMATFDKGT+CSAWN+S+SRL T S+DGT+VIFDS  PSSSSTSLTRTSNFKAHEAAI KIVWVPPEYGDS+ACICSDG+SSLWEEVVEDAQPL+WK
Subjt:  MEKAMATFDKGTLCSAWNHSSSRLATASSDGTLVIFDSPHPSSSSTSLTRTSNFKAHEAAITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLEWK

Query:  LCKLFKSNSSQILDLQFGNSSSGLKMIAAFSDGYIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGE-QQSSFVLAFSSNTPQL
        L K FKSNSSQI+D+QFGNSSSGLKMIAAFSDG +KVYELMDPLDLKSWQLQAEFQNVIDSISTVRK++C SASISWNP+RGE QQSSFVLAF S+TPQL
Subjt:  LCKLFKSNSSQILDLQFGNSSSGLKMIAAFSDGYIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGE-QQSSFVLAFSSNTPQL

Query:  NSAKVWEFDQAHQRWLPVAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQRGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST
        +SAKVWEFDQAHQRWLPVAELAL A+KGD VYAVAWAQNIGRPYEVIAVATQ+GIAIWRLGL+PD+DGRLSTERVALLSGHNGEVW+MEWDMGGMTLAST
Subjt:  NSAKVWEFDQAHQRWLPVAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQRGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGVWHQHAAFEPTS
        GKDGMVRLWQSNLNGVWHQHAAFEPTS
Subjt:  GKDGMVRLWQSNLNGVWHQHAAFEPTS

SwissProt top hitse value%identityAlignment
A7YY75 Nucleoporin SEH17.1e-3229.41Show/hide
Query:  RLATASSDGTLVIFDSPHPSSSSTSLTRTSNFKAHEAAITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQ-----PLEWKLCKLFKSNSSQILDLQF
        R+AT SSD ++ ++D     S S     T+++K H  ++ ++ W  PE+G  +A    D T+++WEE+V ++         W        + + + D++F
Subjt:  RLATASSDGTLVIFDSPHPSSSSTSLTRTSNFKAHEAAITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQ-----PLEWKLCKLFKSNSSQILDLQF

Query:  GNSSSGLKMIAAFSDGYIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGEQQSSFVLAFSSNTPQLNSAKVWEFD-QAHQRWLP
             GL +    +DG +++YE  D ++L  W LQ E            K SCS   ISWNP      +  +   S ++     AKV  F+   + R   
Subjt:  GNSSSGLKMIAAFSDGYIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGEQQSSFVLAFSSNTPQLNSAKVWEFD-QAHQRWLP

Query:  VAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQRGIAIWRLG------LSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKDGMVRLWQS
         AE  LT    D V+ +A+A N+GR + ++A+AT + + I+ L        S     +     VA    HN +VW + W++ G  LAS+G DG VRLW++
Subjt:  VAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQRGIAIWRLG------LSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKDGMVRLWQS

Query:  NLNGVW
        N    W
Subjt:  NLNGVW

C1BK83 Nucleoporin SEH12.2e-3328.43Show/hide
Query:  AWNHSSSRLATASSDGTLVIFDSPHPSSSSTSLTRTSNFKAHEAAITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLEWKLCKLFK-----SNSS
        +++    R+AT SSD ++ ++D     S +     T+++K H  ++ ++ W  PE+G  +A    D T+++WEE+V ++   +  L    K      + +
Subjt:  AWNHSSSRLATASSDGTLVIFDSPHPSSSSTSLTRTSNFKAHEAAITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLEWKLCKLFK-----SNSS

Query:  QILDLQFGNSSSGLKMIAAFSDGYIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGEQQSSFVLAFS--SNTPQLNSAKVWEFD
         + D++F     GL +    +DG +++YE  D ++L  W LQ E            K SCS   ISWNP      S  +   S  SNT      +++E+ 
Subjt:  QILDLQFGNSSSGLKMIAAFSDGYIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGEQQSSFVLAFS--SNTPQLNSAKVWEFD

Query:  QAHQRWLPVAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQRGIAIWRL-----GLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKDG
        +  +++  V  L       D V+ +A+A N+GR + V+A+AT + + I++L       S     +L  +  A   GHN +VW + W++    LAS+G DG
Subjt:  QAHQRWLPVAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQRGIAIWRL-----GLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKDG

Query:  MVRLWQSNLNGVW
         VRLW++N    W
Subjt:  MVRLWQSNLNGVW

Q6GNF1 Nucleoporin SEH1-B5.4e-3227.45Show/hide
Query:  RLATASSDGTLVIFDSPHPSSSSTSLTRTSNFKAHEAAITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQ-----PLEWKLCKLFKSNSSQILDLQF
        R+AT SSD ++ ++D     S + +   T+++K H  ++ ++ W  PE+G  +A    D T+++WEE+V ++         W        + + + D++F
Subjt:  RLATASSDGTLVIFDSPHPSSSSTSLTRTSNFKAHEAAITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQ-----PLEWKLCKLFKSNSSQILDLQF

Query:  GNSSSGLKMIAAFSDGYIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGEQQSSFVLAFSSNTPQ--LNSAKVWEFDQAHQRWL
             GL +    +DG +++YE  D ++L  W LQ E            K SCS   ISWNP      S  +   S ++    +   +++E+++  +++ 
Subjt:  GNSSSGLKMIAAFSDGYIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGEQQSSFVLAFSSNTPQ--LNSAKVWEFDQAHQRWL

Query:  PVAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQ--RGIAIWRLGLSPDTDG---RLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKDGMVRLWQS
          A+        D V+ +A+A N+GR + ++AVAT+  R   +  L     + G   +     VA    HN +VW + W++ G  LAS+G DG VRLW++
Subjt:  PVAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQ--RGIAIWRLGLSPDTDG---RLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKDGMVRLWQS

Query:  NLNGVW
        N    W
Subjt:  NLNGVW

Q93VR9 Protein SEH16.0e-12463.69Show/hide
Query:  MEKAMATFDKGTLCSAWNHSSSRLATASSDGTLVIFDSPHPSSSSTSLTRTSNFKAHEAAITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLEWK
        M K+MAT D GT CS+WN S  RLA  S +G L I++S   +SSS++ + TS  +  E++I KIVW+P EYGD+VAC+C DG+ S+WEE+ EDA  LEWK
Subjt:  MEKAMATFDKGTLCSAWNHSSSRLATASSDGTLVIFDSPHPSSSSTSLTRTSNFKAHEAAITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLEWK

Query:  LCKLFKSNSSQILDLQFGNSSSGLKMIAAFSDGYIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGEQQS-SFVLAFSSNTPQL
        LCK  K+ SSQ+LD+QFG S   LKM+AA+SDGY++V+EL++PL+LK+WQLQAEFQNVIDS+ST+ K S  SAS+SWNP +GE+Q  SFVLAF+S++P L
Subjt:  LCKLFKSNSSQILDLQFGNSSSGLKMIAAFSDGYIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGEQQS-SFVLAFSSNTPQL

Query:  NSAKVWEFDQAHQRWLPVAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQRGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST
        NS+K+WEFD+AH RWL VAELAL  +KGD VYA++WA NIGRPYEV+AVAT +GI IW +GL+PD +GRL  ++V+ LSGH GEVW+MEWDM GMTLAST
Subjt:  NSAKVWEFDQAHQRWLPVAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQRGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGVWHQHAAFEP
        G DGMV+LWQSNLNG WH+ A  EP
Subjt:  GKDGMVRLWQSNLNGVWHQHAAFEP

Q96EE3 Nucleoporin SEH15.4e-3229.41Show/hide
Query:  RLATASSDGTLVIFDSPHPSSSSTSLTRTSNFKAHEAAITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQ-----PLEWKLCKLFKSNSSQILDLQF
        R+AT SSD ++ ++D     S S     T+++K H  ++ ++ W  PE+G  +A    D T+++WEE+V ++         W        + + + D++F
Subjt:  RLATASSDGTLVIFDSPHPSSSSTSLTRTSNFKAHEAAITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQ-----PLEWKLCKLFKSNSSQILDLQF

Query:  GNSSSGLKMIAAFSDGYIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGEQQSSFVLAFSSNTPQLNSAKVWEFD-QAHQRWLP
             GL +    +DG +++YE  D ++L  W LQ E            K SCS   ISWNP      S  +   S ++     AKV  F+   + R   
Subjt:  GNSSSGLKMIAAFSDGYIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGEQQSSFVLAFSSNTPQLNSAKVWEFD-QAHQRWLP

Query:  VAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQRGIAIWRLG------LSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKDGMVRLWQS
         AE  +T    D V+ +A+A N+GR + ++A+AT + + I+ L        S     +     VA    HN +VW + W++ G  LAS+G DG VRLW++
Subjt:  VAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQRGIAIWRLG------LSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKDGMVRLWQS

Query:  NLNGVW
        N    W
Subjt:  NLNGVW

Arabidopsis top hitse value%identityAlignment
AT1G64350.1 Transducin/WD40 repeat-like superfamily protein4.3e-12563.69Show/hide
Query:  MEKAMATFDKGTLCSAWNHSSSRLATASSDGTLVIFDSPHPSSSSTSLTRTSNFKAHEAAITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLEWK
        M K+MAT D GT CS+WN S  RLA  S +G L I++S   +SSS++ + TS  +  E++I KIVW+P EYGD+VAC+C DG+ S+WEE+ EDA  LEWK
Subjt:  MEKAMATFDKGTLCSAWNHSSSRLATASSDGTLVIFDSPHPSSSSTSLTRTSNFKAHEAAITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLEWK

Query:  LCKLFKSNSSQILDLQFGNSSSGLKMIAAFSDGYIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGEQQS-SFVLAFSSNTPQL
        LCK  K+ SSQ+LD+QFG S   LKM+AA+SDGY++V+EL++PL+LK+WQLQAEFQNVIDS+ST+ K S  SAS+SWNP +GE+Q  SFVLAF+S++P L
Subjt:  LCKLFKSNSSQILDLQFGNSSSGLKMIAAFSDGYIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGEQQS-SFVLAFSSNTPQL

Query:  NSAKVWEFDQAHQRWLPVAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQRGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST
        NS+K+WEFD+AH RWL VAELAL  +KGD VYA++WA NIGRPYEV+AVAT +GI IW +GL+PD +GRL  ++V+ LSGH GEVW+MEWDM GMTLAST
Subjt:  NSAKVWEFDQAHQRWLPVAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQRGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGVWHQHAAFEP
        G DGMV+LWQSNLNG WH+ A  EP
Subjt:  GKDGMVRLWQSNLNGVWHQHAAFEP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGGCTATGGCGACATTCGACAAAGGCACTCTCTGTTCTGCTTGGAACCACTCCTCTAGCAGATTAGCCACCGCTTCTTCCGACGGAACCCTCGTTATCTTTGA
TTCTCCCCACCCTTCTTCTTCCTCCACCTCCTTAACTCGCACCTCAAACTTCAAGGCACACGAGGCTGCAATTACTAAGATTGTTTGGGTACCTCCGGAGTATGGTGATT
CTGTTGCGTGCATATGTTCAGATGGAACTTCATCGTTGTGGGAGGAGGTTGTTGAAGATGCCCAGCCCCTAGAGTGGAAGCTATGCAAACTCTTTAAAAGTAATTCATCT
CAAATCCTAGACTTGCAATTTGGAAATTCCTCCTCTGGTCTGAAAATGATTGCTGCATTTTCAGATGGTTATATAAAAGTTTATGAGCTTATGGATCCTTTGGATTTGAA
GAGTTGGCAACTTCAGGCTGAATTTCAGAATGTTATTGATTCCATTTCTACAGTCAGGAAATCTTCTTGTTCATCTGCAAGTATATCATGGAATCCCCATCGAGGGGAGC
AGCAATCAAGCTTTGTTCTTGCTTTTAGCTCCAATACACCACAGCTTAATTCGGCCAAGGTTTGGGAATTTGATCAGGCTCATCAAAGATGGCTTCCTGTGGCAGAGTTG
GCTTTGACTGCAGAGAAAGGTGATGAGGTTTATGCTGTTGCATGGGCACAAAATATTGGAAGGCCATATGAGGTAATAGCTGTTGCAACCCAGAGAGGAATTGCAATATG
GCGTCTTGGATTAAGCCCAGACACGGATGGAAGGCTCTCAACAGAAAGAGTTGCTCTGCTTTCTGGGCATAATGGCGAGGTGTGGGAGATGGAGTGGGACATGGGTGGTA
TGACATTAGCATCAACAGGAAAGGACGGAATGGTACGGTTATGGCAGTCCAACCTCAATGGTGTTTGGCACCAACATGCTGCATTTGAGCCGACTTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAGGCTATGGCGACATTCGACAAAGGCACTCTCTGTTCTGCTTGGAACCACTCCTCTAGCAGATTAGCCACCGCTTCTTCCGACGGAACCCTCGTTATCTTTGA
TTCTCCCCACCCTTCTTCTTCCTCCACCTCCTTAACTCGCACCTCAAACTTCAAGGCACACGAGGCTGCAATTACTAAGATTGTTTGGGTACCTCCGGAGTATGGTGATT
CTGTTGCGTGCATATGTTCAGATGGAACTTCATCGTTGTGGGAGGAGGTTGTTGAAGATGCCCAGCCCCTAGAGTGGAAGCTATGCAAACTCTTTAAAAGTAATTCATCT
CAAATCCTAGACTTGCAATTTGGAAATTCCTCCTCTGGTCTGAAAATGATTGCTGCATTTTCAGATGGTTATATAAAAGTTTATGAGCTTATGGATCCTTTGGATTTGAA
GAGTTGGCAACTTCAGGCTGAATTTCAGAATGTTATTGATTCCATTTCTACAGTCAGGAAATCTTCTTGTTCATCTGCAAGTATATCATGGAATCCCCATCGAGGGGAGC
AGCAATCAAGCTTTGTTCTTGCTTTTAGCTCCAATACACCACAGCTTAATTCGGCCAAGGTTTGGGAATTTGATCAGGCTCATCAAAGATGGCTTCCTGTGGCAGAGTTG
GCTTTGACTGCAGAGAAAGGTGATGAGGTTTATGCTGTTGCATGGGCACAAAATATTGGAAGGCCATATGAGGTAATAGCTGTTGCAACCCAGAGAGGAATTGCAATATG
GCGTCTTGGATTAAGCCCAGACACGGATGGAAGGCTCTCAACAGAAAGAGTTGCTCTGCTTTCTGGGCATAATGGCGAGGTGTGGGAGATGGAGTGGGACATGGGTGGTA
TGACATTAGCATCAACAGGAAAGGACGGAATGGTACGGTTATGGCAGTCCAACCTCAATGGTGTTTGGCACCAACATGCTGCATTTGAGCCGACTTCTTAA
Protein sequenceShow/hide protein sequence
MEKAMATFDKGTLCSAWNHSSSRLATASSDGTLVIFDSPHPSSSSTSLTRTSNFKAHEAAITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLEWKLCKLFKSNSS
QILDLQFGNSSSGLKMIAAFSDGYIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGEQQSSFVLAFSSNTPQLNSAKVWEFDQAHQRWLPVAEL
ALTAEKGDEVYAVAWAQNIGRPYEVIAVATQRGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKDGMVRLWQSNLNGVWHQHAAFEPTS