| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0033083.1 copia protein [Cucumis melo var. makuwa] | 2.05e-303 | 51.76 | Show/hide |
Query: MKALLGSQDVWDIVSNGYEEPESDAALNQVEREVFQNTRKKYQKALTIIHQAINDNNFEKISGATTAYQAWKILENTYKGVDRVKK--------------
MKALLGSQDVWDIVSNGYEEPESDA NQ +RE QNTRK QKALTIIHQAI+DNNFEKISGATTAYQAW+ILENTYKGVDRVKK
Subjt: MKALLGSQDVWDIVSNGYEEPESDAALNQVEREVFQNTRKKYQKALTIIHQAINDNNFEKISGATTAYQAWKILENTYKGVDRVKK--------------
Query: --------------------------------------------------------DLSKMSINRLMGSLQVHEEKLLKKNKQMTEQLFQSKLKLKDKED
DLS MSI++LMGSLQ HEEKLLKKNKQMTEQLFQSKLKLKDKE
Subjt: --------------------------------------------------------DLSKMSINRLMGSLQVHEEKLLKKNKQMTEQLFQSKLKLKDKED
Query: NLEKGNRGRGRG------DFK-----------------------------------------VEVEEATVKENLI---KVIQTQIHQE------------
NLEKGNRGRGRG DFK E +E + +L+ K ++T +
Subjt: NLEKGNRGRGRG------DFK-----------------------------------------VEVEEATVKENLI---KVIQTQIHQE------------
Query: ------VEEDNIIRGQL-----------GKDQIMTGGMTKDRLN----------------------------------VIIVINSAIVLG----------
VE D + G + GK + M G+ +L V V + V G
Subjt: ------VEEDNIIRGQL-----------GKDQIMTGGMTKDRLN----------------------------------VIIVINSAIVLG----------
Query: --------------------------------------------NAEIELKKMQIMLRKMKKAKCKKMPKEFWAQAVECAVYLSNRCPTRSLWNKTPEEA
N +E K I+ KCKKMPKEFWAQAVECAVYLSNR PTRSLWNKTP++A
Subjt: --------------------------------------------NAEIELKKMQIMLRKMKKAKCKKMPKEFWAQAVECAVYLSNRCPTRSLWNKTPEEA
Query: WIGRKPSIGYLRVFGCMAYAYIPDQKRSKLDDKSEKYVFVGYDASSKVYKFYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYKILFFPEDRDEPSDIASP
W GRKPSIG+LRVFGCMAYA+IPDQKRSKLDDKSEKYVFVGYDASSK YK YNPVTKKTIVSRDVVFDEEASWNWNDEPEDYK L FP++RDEPSDIASP
Subjt: WIGRKPSIGYLRVFGCMAYAYIPDQKRSKLDDKSEKYVFVGYDASSKVYKFYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYKILFFPEDRDEPSDIASP
Query: PTLPITPQQSTSSSSASSSEAPCSMRSLRDIYDETEELSQSFNNLTLFCLFGDNEPLNFEEASQNDKWTIVMDEEIKVIKKNDTWELSTLPNGKKAIG--
PT PITPQQSTSSSSASSSE P MRSL+DIYDETEELSQSFNNLTLFCLF D+EPLNFEEASQNDKW I MDEEIK IKKNDTWELSTLPNGKKA+G
Subjt: PTLPITPQQSTSSSSASSSEAPCSMRSLRDIYDETEELSQSFNNLTLFCLFGDNEPLNFEEASQNDKWTIVMDEEIKVIKKNDTWELSTLPNGKKAIG--
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------NCTSMFKDLKNAMTQEFEMTDIGLMSYYLSIEVKQSEEGIFI
NC SMF+DLK AMTQEFEMTDIGLMSYYL IEVKQSEEGIFI
Subjt: ----------------------------------------------------------NCTSMFKDLKNAMTQEFEMTDIGLMSYYLSIEVKQSEEGIFI
Query: SQERYTREILEKFNMMNSKSVATPIETGTKLSKHEEGDDVDLSYFKSLVRSLRYLTCTQPDILFRVGLVSLFMESPTTTHLKVAKRILRYLRGTLDYRLF
SQERYTR+ILEKFNMMNSKSVATPIETGTKLSKHEEGDDVD SYFKSLV SLRYLTCT+PDILF VGLVS FMESPTTTHLKVAKRILRYLRGTLDY LF
Subjt: SQERYTREILEKFNMMNSKSVATPIETGTKLSKHEEGDDVDLSYFKSLVRSLRYLTCTQPDILFRVGLVSLFMESPTTTHLKVAKRILRYLRGTLDYRLF
Query: YSSSKEFKLEGYCDSDWAGDTDDRKSTSQYVFFVGNTAFTWSSKKQPIVTLST
YSSSKEFKLEGYCDSDWAGDT+DRKSTS YVFF+GNTAFTWSSKKQPIVTLST
Subjt: YSSSKEFKLEGYCDSDWAGDTDDRKSTSQYVFFVGNTAFTWSSKKQPIVTLST
|
|
| KAA0037149.1 copia protein [Cucumis melo var. makuwa] | 1.22e-298 | 50.85 | Show/hide |
Query: MKALLGSQDVWDIVSNGYEEPESDAALNQVEREVFQNTRKKYQKALTIIHQAINDNNFEKISGATTAYQAWKILENTYKGVDRVKK--------------
MKALLGSQDVWDIVSNGYEEPESDAALNQ +RE QNTRKK QKALTIIHQAI+DNNFEKISGATTAYQAW+ILENTYKGVDRVKK
Subjt: MKALLGSQDVWDIVSNGYEEPESDAALNQVEREVFQNTRKKYQKALTIIHQAINDNNFEKISGATTAYQAWKILENTYKGVDRVKK--------------
Query: --------------------------------------------------------DLSKMSINRLMGSLQVHEEKLLKKNKQMTEQLFQSKLKLKDKED
DLS MSI++LMGSLQ HEEKLLKKNKQMTEQLFQSKLKLKDKE
Subjt: --------------------------------------------------------DLSKMSINRLMGSLQVHEEKLLKKNKQMTEQLFQSKLKLKDKED
Query: NLEKGNRGRGRG------DFK-------------------------------------------------------------------------------
+LEKGNRGRGRG DFK
Subjt: NLEKGNRGRGRG------DFK-------------------------------------------------------------------------------
Query: ------VEVEEAT-----------------VKENLIKVI-------------------QTQIHQE-----------------VEEDNIIRGQLGKDQIMT
+E++E+ ++N++K + + QE V+E + + G + + +
Subjt: ------VEVEEAT-----------------VKENLIKVI-------------------QTQIHQE-----------------VEEDNIIRGQLGKDQIMT
Query: ----------------GGMTKDRLNVIIVIN--------SAIVLGNAEIELKKMQIMLRKMKKAKCKKMPKEFWAQAVECAVYLSNRCPTRSLWNKTPEE
G T + V N S N +E K I+ KCKKMPKEFWAQAVECAVYLSNR PTRSLWNKTP++
Subjt: ----------------GGMTKDRLNVIIVIN--------SAIVLGNAEIELKKMQIMLRKMKKAKCKKMPKEFWAQAVECAVYLSNRCPTRSLWNKTPEE
Query: AWIGRKPSIGYLRVFGCMAYAYIPDQKRSKLDDKSEKYVFVGYDASSKVYKFYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYKILFFPEDRDEPSDIAS
AW GRKPSIG+LRVFGCMAYA+IPDQK SKLDDKSEKYVFVGYDASSK YK YN V+KKTIVSRDVVFDEEASWNWNDEPEDYK L FP++ DEPSDIAS
Subjt: AWIGRKPSIGYLRVFGCMAYAYIPDQKRSKLDDKSEKYVFVGYDASSKVYKFYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYKILFFPEDRDEPSDIAS
Query: PPTLPITPQQSTSSSSASSSEAPCSMRSLRDIYDETEELSQSFNNLTLFCLFGDNEPLNFEEASQNDKWTIVMDEEIKVIKKNDTWELSTLPNGKKAIG-
PPT PITPQQST SSSASSSE P MRSL+DIYDETEEL Q FNNLTLFCLFGD+EPLNFEEASQNDKW I MDEEIK IKKNDTWELSTLPNGKKA+G
Subjt: PPTLPITPQQSTSSSSASSSEAPCSMRSLRDIYDETEELSQSFNNLTLFCLFGDNEPLNFEEASQNDKWTIVMDEEIKVIKKNDTWELSTLPNGKKAIG-
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: -----------------------------------------------------------NCTSMFKDLKNAMTQEFEMTDIGLMSYYLSIEVKQSEEGIF
NC SMF+DLK AMTQEFEMTDIGLMSYYL IEVKQSEEGIF
Subjt: -----------------------------------------------------------NCTSMFKDLKNAMTQEFEMTDIGLMSYYLSIEVKQSEEGIF
Query: ISQERYTREILEKFNMMNSKSVATPIETGTKLSKHEEGDDVDLSYFKSLVRSLRYLTCTQPDILFRVGLVSLFMESPTTTHLKVAKRILRYLRGTLDYRL
ISQERYTR+ILEKFNMMNSKSVATPIETGTKLSKHEEGDDVD SYFKSLV SLRYLTCT+PDILF VGLVS FMESPTTTHLKV KRILRYLRGTLDY L
Subjt: ISQERYTREILEKFNMMNSKSVATPIETGTKLSKHEEGDDVDLSYFKSLVRSLRYLTCTQPDILFRVGLVSLFMESPTTTHLKVAKRILRYLRGTLDYRL
Query: FYSSSKEFKLEGYCDSDWAGDTDDRKSTSQYVFFVGNTAFTWSSKKQPIVTLST
FYSSSKEFKLEGYCDSDWAGDT+DRKSTS YVFF+GNTAFTWSSKKQPIVTLST
Subjt: FYSSSKEFKLEGYCDSDWAGDTDDRKSTSQYVFFVGNTAFTWSSKKQPIVTLST
|
|
| KAA0043082.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 0.0 | 100 | Show/hide |
Query: MPKEFWAQAVECAVYLSNRCPTRSLWNKTPEEAWIGRKPSIGYLRVFGCMAYAYIPDQKRSKLDDKSEKYVFVGYDASSKVYKFYNPVTKKTIVSRDVVF
MPKEFWAQAVECAVYLSNRCPTRSLWNKTPEEAWIGRKPSIGYLRVFGCMAYAYIPDQKRSKLDDKSEKYVFVGYDASSKVYKFYNPVTKKTIVSRDVVF
Subjt: MPKEFWAQAVECAVYLSNRCPTRSLWNKTPEEAWIGRKPSIGYLRVFGCMAYAYIPDQKRSKLDDKSEKYVFVGYDASSKVYKFYNPVTKKTIVSRDVVF
Query: DEEASWNWNDEPEDYKILFFPEDRDEPSDIASPPTLPITPQQSTSSSSASSSEAPCSMRSLRDIYDETEELSQSFNNLTLFCLFGDNEPLNFEEASQNDK
DEEASWNWNDEPEDYKILFFPEDRDEPSDIASPPTLPITPQQSTSSSSASSSEAPCSMRSLRDIYDETEELSQSFNNLTLFCLFGDNEPLNFEEASQNDK
Subjt: DEEASWNWNDEPEDYKILFFPEDRDEPSDIASPPTLPITPQQSTSSSSASSSEAPCSMRSLRDIYDETEELSQSFNNLTLFCLFGDNEPLNFEEASQNDK
Query: WTIVMDEEIKVIKKNDTWELSTLPNGKKAIGNCTSMFKDLKNAMTQEFEMTDIGLMSYYLSIEVKQSEEGIFISQERYTREILEKFNMMNSKSVATPIET
WTIVMDEEIKVIKKNDTWELSTLPNGKKAIGNCTSMFKDLKNAMTQEFEMTDIGLMSYYLSIEVKQSEEGIFISQERYTREILEKFNMMNSKSVATPIET
Subjt: WTIVMDEEIKVIKKNDTWELSTLPNGKKAIGNCTSMFKDLKNAMTQEFEMTDIGLMSYYLSIEVKQSEEGIFISQERYTREILEKFNMMNSKSVATPIET
Query: GTKLSKHEEGDDVDLSYFKSLVRSLRYLTCTQPDILFRVGLVSLFMESPTTTHLKVAKRILRYLRGTLDYRLFYSSSKEFKLEGYCDSDWAGDTDDRKST
GTKLSKHEEGDDVDLSYFKSLVRSLRYLTCTQPDILFRVGLVSLFMESPTTTHLKVAKRILRYLRGTLDYRLFYSSSKEFKLEGYCDSDWAGDTDDRKST
Subjt: GTKLSKHEEGDDVDLSYFKSLVRSLRYLTCTQPDILFRVGLVSLFMESPTTTHLKVAKRILRYLRGTLDYRLFYSSSKEFKLEGYCDSDWAGDTDDRKST
Query: SQYVFFVGNTAFTWSSKKQPIVTLSTSNRCVAPPSSSSCRRALLHRPCIVDRSPALRSSAGDRADHPRLISRPPFVELRQSSASLPEALLRTSEPSHPSK
SQYVFFVGNTAFTWSSKKQPIVTLSTSNRCVAPPSSSSCRRALLHRPCIVDRSPALRSSAGDRADHPRLISRPPFVELRQSSASLPEALLRTSEPSHPSK
Subjt: SQYVFFVGNTAFTWSSKKQPIVTLSTSNRCVAPPSSSSCRRALLHRPCIVDRSPALRSSAGDRADHPRLISRPPFVELRQSSASLPEALLRTSEPSHPSK
Query: PVASALRPHLTSRFLGRAAEPRVSKPYLREPYPSASHTRVL
PVASALRPHLTSRFLGRAAEPRVSKPYLREPYPSASHTRVL
Subjt: PVASALRPHLTSRFLGRAAEPRVSKPYLREPYPSASHTRVL
|
|
| KAA0062149.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.08e-291 | 47.14 | Show/hide |
Query: MKALLGSQDVWDIVSNGYEEPESDAALNQVEREVFQNTRKKYQKALTIIHQAINDNNFEKISGATTAYQAWKILENTYKGVDRVKK--------------
MKALLGSQDVWDIVSNGYEEPESDAALNQ +RE QNTRKKYQKALTIIHQAI+DNNFEKISGATTAYQAW+ILENTYKGVDRVKK
Subjt: MKALLGSQDVWDIVSNGYEEPESDAALNQVEREVFQNTRKKYQKALTIIHQAINDNNFEKISGATTAYQAWKILENTYKGVDRVKK--------------
Query: --------------------------------------------------------DLSKMSINRLMGSLQVHEEKLLKKNKQMTEQLFQSKLKLKDKED
DLS MSI++LMGSLQ HEEKLLKKNKQMTE+LFQSKLKLKDKE
Subjt: --------------------------------------------------------DLSKMSINRLMGSLQVHEEKLLKKNKQMTEQLFQSKLKLKDKED
Query: NLEKGNRGRGRG------DFK-----------------------------------------------------------------------------VE
+LEKGNRGRGRG DFK VE
Subjt: NLEKGNRGRGRG------DFK-----------------------------------------------------------------------------VE
Query: VEEAT----------------------------------------VKENLIKV-----------------------------------------IQTQIH
++E+ +K N++ + IQT +
Subjt: VEEAT----------------------------------------VKENLIKV-----------------------------------------IQTQIH
Query: QEVEE--------------------------DNIIRG----QLGKDQIMTG---------------------------------------GMTKDRLNVI
+ ++ N+++G +L DQ+ G GM K R +
Subjt: QEVEE--------------------------DNIIRG----QLGKDQIMTG---------------------------------------GMTKDRLNVI
Query: IVINSAIVLG------------------------------------NAEIELKKMQIMLRKMKKAKCKKMPKEFWAQAVECAVYLSNRCPTRSLWNKTPE
+ S + N +E K I+ KCKKMPKEFWAQAVECAVYLSNR P RSLWNKTP+
Subjt: IVINSAIVLG------------------------------------NAEIELKKMQIMLRKMKKAKCKKMPKEFWAQAVECAVYLSNRCPTRSLWNKTPE
Query: EAWIGRKPSIGYLRVFGCMAYAYIPDQKRSKLDDKSEKYVFVGYDASSKVYKFYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYKILFFPEDRDEPSDIA
+AWIGRKPSIG+LRVFGCMAYA+IPDQKRSKLDDKSEKYVFVGYDASSK YK YNPVTKKTIVSRDVVFDEEASWNWNDEPEDYK LFFP++RDEPSDIA
Subjt: EAWIGRKPSIGYLRVFGCMAYAYIPDQKRSKLDDKSEKYVFVGYDASSKVYKFYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYKILFFPEDRDEPSDIA
Query: SPPTLPITPQQSTSSSSASSSEAPCSMRSLRDIYDETEELSQSFNNLTLFCLFGDNEPLNFEEASQNDKWTIVMDEEIKVIKKNDTWELSTLPNGKKAIG
SPPT PITPQQSTSSSSASSSE P MRSL+DIYDETEELSQSFNNLTLFCLFGD+EPLNFEEASQNDKW I MDE+IK IKKNDTWELSTLPNGKKA+G
Subjt: SPPTLPITPQQSTSSSSASSSEAPCSMRSLRDIYDETEELSQSFNNLTLFCLFGDNEPLNFEEASQNDKWTIVMDEEIKVIKKNDTWELSTLPNGKKAIG
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ------------------------------------------------------------NCTSMFKDLKNAMTQEFEMTDIGLMSYYLSIEVKQSEEGI
NC SMF+DLKNAMTQEFEMTDIGLMSYYL IEVKQSEEGI
Subjt: ------------------------------------------------------------NCTSMFKDLKNAMTQEFEMTDIGLMSYYLSIEVKQSEEGI
Query: FISQERYTREILEKFNMMNSKSVATPIETGTKLSKHEEGDDVDLSYFKSLVRSLRYLTCTQPDILFRVGLVSLFMESPTTTHLKVAKRILRYLRGTLDYR
FISQERYTREILEKFNMMNSK VATPIETGTKLSKHEEGDDVD SYFKSLV SLRYLTCT+PDILF VGLVS FMESPTTTHLKVAKRILRYLRGTLDY
Subjt: FISQERYTREILEKFNMMNSKSVATPIETGTKLSKHEEGDDVDLSYFKSLVRSLRYLTCTQPDILFRVGLVSLFMESPTTTHLKVAKRILRYLRGTLDYR
Query: LFYSSSKEFKLEGYCDSDWAGDTDDRKSTSQYVFFVGNTAFTWSSKKQPIVTLSTSNRCVAPPSSSSCRRALL
LFYSSSKEFKLEGYCDSDWAGDT+DRKSTS YVFF+GNTAFTWSSKKQPIVTLST +S C L
Subjt: LFYSSSKEFKLEGYCDSDWAGDTDDRKSTSQYVFFVGNTAFTWSSKKQPIVTLSTSNRCVAPPSSSSCRRALL
|
|
| TYK12007.1 copia protein [Cucumis melo var. makuwa] | 8.10e-296 | 49.09 | Show/hide |
Query: MKALLGSQDVWDIVSNGYEEPESDAALNQVEREVFQNTRKKYQKALTIIHQAINDNNFEKISGATTAYQAWKILENTYKGVDRVKK--------------
MKALLGSQDVWDIVSNGYEEPESDAALNQ +RE QNTRKK QKALTIIHQAI+DNNFEKIS ATTAYQAW+ILENTYKGVDRVKK
Subjt: MKALLGSQDVWDIVSNGYEEPESDAALNQVEREVFQNTRKKYQKALTIIHQAINDNNFEKISGATTAYQAWKILENTYKGVDRVKK--------------
Query: --------------------------------------------------------DLSKMSINRLMGSLQVHEEKLLKKNKQMTEQLFQSKLKLKDKED
DLS MSI++LMGSLQ H+E L KKNKQMTEQLFQSKLKLKDKED
Subjt: --------------------------------------------------------DLSKMSINRLMGSLQVHEEKLLKKNKQMTEQLFQSKLKLKDKED
Query: NLEKGNRGRGRG------DFK-------------------------------------------------------------------------------
LEKGNRGRGRG DFK
Subjt: NLEKGNRGRGRG------DFK-------------------------------------------------------------------------------
Query: -----------------VEVEEAT--------------------------------------VKENLIKVI-------------------QTQIHQE---
VE++E+ ++N++K + + QE
Subjt: -----------------VEVEEAT--------------------------------------VKENLIKVI-------------------QTQIHQE---
Query: --------------VEEDNIIRGQLGKDQIMT----------------GGMTKDRLNVIIVINSA--------IVLGNAEIELKKMQIMLRKMKKAKCKK
V+E + + G + + + G T + V N N +E K I+ KCKK
Subjt: --------------VEEDNIIRGQLGKDQIMT----------------GGMTKDRLNVIIVINSA--------IVLGNAEIELKKMQIMLRKMKKAKCKK
Query: MPKEFWAQAVECAVYLSNRCPTRSLWNKTPEEAWIGRKPSIGYLRVFGCMAYAYIPDQKRSKLDDKSEKYVFVGYDASSKVYKFYNPVTKKTIVSRDVVF
MPKEFWAQAVECAVYLSNR PTRSLWNKTP++AW GRKPSIG+LRVFGCMAYA+IPDQKRSKLDDKSEKYVFVGYDASSK YK YNPVTKKTIVSRDVVF
Subjt: MPKEFWAQAVECAVYLSNRCPTRSLWNKTPEEAWIGRKPSIGYLRVFGCMAYAYIPDQKRSKLDDKSEKYVFVGYDASSKVYKFYNPVTKKTIVSRDVVF
Query: DEEASWNWNDEPEDYKILFFPEDRDEPSDIASPPTLPITPQQSTSSSSASSSEAPCSMRSLRDIYDETEELSQSFNNLTLFCLFGDNEPLNFEEASQNDK
DEEASWNWNDEPEDYK L FP++ DEPSDIASPPT PITPQQSTSSSSASSSE P MRSL+DIYDETEELSQSFNNLTLFCLF D+EPLNFEEASQNDK
Subjt: DEEASWNWNDEPEDYKILFFPEDRDEPSDIASPPTLPITPQQSTSSSSASSSEAPCSMRSLRDIYDETEELSQSFNNLTLFCLFGDNEPLNFEEASQNDK
Query: WTIVMDEEIKVIKKNDTWELSTLPNGKKAIG---------------------------------------------------------------------
W I MDEEIK IKKNDTWELSTLPNGKKA+G
Subjt: WTIVMDEEIKVIKKNDTWELSTLPNGKKAIG---------------------------------------------------------------------
Query: -------------------------------------------------------------------------------------------NCTSMFKDL
NC SMF+DL
Subjt: -------------------------------------------------------------------------------------------NCTSMFKDL
Query: KNAMTQEFEMTDIGLMSYYLSIEVKQSEEGIFISQERYTREILEKFNMMNSKSVATPIETGTKLSKHEEGDDVDLSYFKSLVRSLRYLTCTQPDILFRVG
K AMTQEFEMTDIGLMSYYL IEVKQSEEGIFISQERYTREILEKFNMMNSK VATPIETGTKLSKHEEGDDVD SYFKSLV SLRYLTCT+PDILF VG
Subjt: KNAMTQEFEMTDIGLMSYYLSIEVKQSEEGIFISQERYTREILEKFNMMNSKSVATPIETGTKLSKHEEGDDVDLSYFKSLVRSLRYLTCTQPDILFRVG
Query: LVSLFMESPTTTHLKVAKRILRYLRGTLDYRLFYSSSKEFKLEGYCDSDWAGDTDDRKSTSQYVFFVGNTAFTWSSKKQPIVTLSTSNRCVAPPSSSSCR
LVS FMESPTTTHLKVAKRILRYLRGTLDY LFYSSSKEFKLEGYCDSDWAGDT+DRKSTS YVFF+GNTAFTWSSKKQPIVTLST +S C
Subjt: LVSLFMESPTTTHLKVAKRILRYLRGTLDYRLFYSSSKEFKLEGYCDSDWAGDTDDRKSTSQYVFFVGNTAFTWSSKKQPIVTLSTSNRCVAPPSSSSCR
Query: RALL
L
Subjt: RALL
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SRM0 Copia protein | 1.6e-250 | 50.78 | Show/hide |
Query: MKALLGSQDVWDIVSNGYEEPESDAALNQVEREVFQNTRKKYQKALTIIHQAINDNNFEKISGATTAYQAWKILENTYKGVDRVK---------------
MKALLGSQDVWDIVSNGYEEPESDA NQ +RE QNTRK QKALTIIHQAI+DNNFEKISGATTAYQAW+ILENTYKGVDRVK
Subjt: MKALLGSQDVWDIVSNGYEEPESDAALNQVEREVFQNTRKKYQKALTIIHQAINDNNFEKISGATTAYQAWKILENTYKGVDRVK---------------
Query: -------------------------------------------------------KDLSKMSINRLMGSLQVHEEKLLKKNKQMTEQLFQSKLKLKDKED
KDLS MSI++LMGSLQ HEEKLLKKNKQMTEQLFQSKLKLKDKE
Subjt: -------------------------------------------------------KDLSKMSINRLMGSLQVHEEKLLKKNKQMTEQLFQSKLKLKDKED
Query: NLEKGNRG------RGRGDFK-----------------------------------------VEVEEATVKENLI---KVIQTQIHQE------------
NLEKGNRG RGRGDFK E +E + +L+ K ++T +
Subjt: NLEKGNRG------RGRGDFK-----------------------------------------VEVEEATVKENLI---KVIQTQIHQE------------
Query: ------VEEDNIIRGQL-----------GKDQIMTGGMTKDRLN----------------------------------VIIVINSAIVLG----------
VE D + G + GK + M G+ +L V V + V G
Subjt: ------VEEDNIIRGQL-----------GKDQIMTGGMTKDRLN----------------------------------VIIVINSAIVLG----------
Query: --------------------------------------------NAEIELKKMQIMLRKMKKAKCKKMPKEFWAQAVECAVYLSNRCPTRSLWNKTPEEA
N +E K I+ KCKKMPKEFWAQAVECAVYLSNR PTRSLWNKTP++A
Subjt: --------------------------------------------NAEIELKKMQIMLRKMKKAKCKKMPKEFWAQAVECAVYLSNRCPTRSLWNKTPEEA
Query: WIGRKPSIGYLRVFGCMAYAYIPDQKRSKLDDKSEKYVFVGYDASSKVYKFYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYKILFFPEDRDEPSDIASP
W GRKPSIG+LRVFGCMAYA+IPDQKRSKLDDKSEKYVFVGYDASSK YK YNPVTKKTIVSRDVVFDEEASWNWNDEPEDYK L FP++RDEPSDIASP
Subjt: WIGRKPSIGYLRVFGCMAYAYIPDQKRSKLDDKSEKYVFVGYDASSKVYKFYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYKILFFPEDRDEPSDIASP
Query: PTLPITPQQSTSSSSASSSEAPCSMRSLRDIYDETEELSQSFNNLTLFCLFGDNEPLNFEEASQNDKWTIVMDEEIKVIKKNDTWELSTLPNGKKAI---
PT PITPQQSTSSSSASSSE P MRSL+DIYDETEELSQSFNNLTLFCLF D+EPLNFEEASQNDKW I MDEEIK IKKNDTWELSTLPNGKKA+
Subjt: PTLPITPQQSTSSSSASSSEAPCSMRSLRDIYDETEELSQSFNNLTLFCLFGDNEPLNFEEASQNDKWTIVMDEEIKVIKKNDTWELSTLPNGKKAI---
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ---------------------------------------------------------GNCTSMFKDLKNAMTQEFEMTDIGLMSYYLSIEVKQSEEGIFI
GNC SMF+DLK AMTQEFEMTDIGLMSYYL IEVKQSEEGIFI
Subjt: ---------------------------------------------------------GNCTSMFKDLKNAMTQEFEMTDIGLMSYYLSIEVKQSEEGIFI
Query: SQERYTREILEKFNMMNSKSVATPIETGTKLSKHEEGDDVDLSYFKSLVRSLRYLTCTQPDILFRVGLVSLFMESPTTTHLKVAKRILRYLRGTLDYRLF
SQERYTR+ILEKFNMMNSKSVATPIETGTKLSKHEEGDDVD SYFKSLV SLRYLTCT+PDILF VGLVS FMESPTTTHLKVAKRILRYLRGTLDY LF
Subjt: SQERYTREILEKFNMMNSKSVATPIETGTKLSKHEEGDDVDLSYFKSLVRSLRYLTCTQPDILFRVGLVSLFMESPTTTHLKVAKRILRYLRGTLDYRLF
Query: YSSSKEFKLEGYCDSDWAGDTDDRKSTSQYVFFVGNTAFTWSSKKQPIVTLSTSNRCVAPPSSSSCR----RALLHRPCIVDRSPAL
YSSSKEFKLEGYCDSDWAGDT+DRKSTS YVFF+GNTAFTWSSKKQPIVTLST +S C R LL I+ P +
Subjt: YSSSKEFKLEGYCDSDWAGDTDDRKSTSQYVFFVGNTAFTWSSKKQPIVTLSTSNRCVAPPSSSSCR----RALLHRPCIVDRSPAL
|
|
| A0A5A7T701 Copia protein | 1.1e-246 | 50.42 | Show/hide |
Query: MKALLGSQDVWDIVSNGYEEPESDAALNQVEREVFQNTRKKYQKALTIIHQAINDNNFEKISGATTAYQAWKILENTYKGVDRVK---------------
MKALLGSQDVWDIVSNGYEEPESDAALNQ +RE QNTRKK QKALTIIHQAI+DNNFEKISGATTAYQAW+ILENTYKGVDRVK
Subjt: MKALLGSQDVWDIVSNGYEEPESDAALNQVEREVFQNTRKKYQKALTIIHQAINDNNFEKISGATTAYQAWKILENTYKGVDRVK---------------
Query: -------------------------------------------------------KDLSKMSINRLMGSLQVHEEKLLKKNKQMTEQLFQSKLKLKDKED
KDLS MSI++LMGSLQ HEEKLLKKNKQMTEQLFQSKLKLKDKE
Subjt: -------------------------------------------------------KDLSKMSINRLMGSLQVHEEKLLKKNKQMTEQLFQSKLKLKDKED
Query: NLEKGNRG------RGRGDFK-------------------------------------------------------------------------------
+LEKGNRG RGRGDFK
Subjt: NLEKGNRG------RGRGDFK-------------------------------------------------------------------------------
Query: ------VEVEEAT-----------------VKENLIKVI-------------------QTQIHQE-----------------VEEDNIIRGQLGKDQIMT
+E++E+ ++N++K + + QE V+E + + G + + +
Subjt: ------VEVEEAT-----------------VKENLIKVI-------------------QTQIHQE-----------------VEEDNIIRGQLGKDQIMT
Query: ----------------GGMTKDRLNVIIVIN--------SAIVLGNAEIELKKMQIMLRKMKKAKCKKMPKEFWAQAVECAVYLSNRCPTRSLWNKTPEE
G T + V N S N +E K I+ KCKKMPKEFWAQAVECAVYLSNR PTRSLWNKTP++
Subjt: ----------------GGMTKDRLNVIIVIN--------SAIVLGNAEIELKKMQIMLRKMKKAKCKKMPKEFWAQAVECAVYLSNRCPTRSLWNKTPEE
Query: AWIGRKPSIGYLRVFGCMAYAYIPDQKRSKLDDKSEKYVFVGYDASSKVYKFYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYKILFFPEDRDEPSDIAS
AW GRKPSIG+LRVFGCMAYA+IPDQK SKLDDKSEKYVFVGYDASSK YK YN V+KKTIVSRDVVFDEEASWNWNDEPEDYK L FP++ DEPSDIAS
Subjt: AWIGRKPSIGYLRVFGCMAYAYIPDQKRSKLDDKSEKYVFVGYDASSKVYKFYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYKILFFPEDRDEPSDIAS
Query: PPTLPITPQQSTSSSSASSSEAPCSMRSLRDIYDETEELSQSFNNLTLFCLFGDNEPLNFEEASQNDKWTIVMDEEIKVIKKNDTWELSTLPNGKKAI--
PPT PITPQQST SSSASSSE P MRSL+DIYDETEEL Q FNNLTLFCLFGD+EPLNFEEASQNDKW I MDEEIK IKKNDTWELSTLPNGKKA+
Subjt: PPTLPITPQQSTSSSSASSSEAPCSMRSLRDIYDETEELSQSFNNLTLFCLFGDNEPLNFEEASQNDKWTIVMDEEIKVIKKNDTWELSTLPNGKKAI--
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------GNCTSMFKDLKNAMTQEFEMTDIGLMSYYLSIEVKQSEEGIF
GNC SMF+DLK AMTQEFEMTDIGLMSYYL IEVKQSEEGIF
Subjt: ----------------------------------------------------------GNCTSMFKDLKNAMTQEFEMTDIGLMSYYLSIEVKQSEEGIF
Query: ISQERYTREILEKFNMMNSKSVATPIETGTKLSKHEEGDDVDLSYFKSLVRSLRYLTCTQPDILFRVGLVSLFMESPTTTHLKVAKRILRYLRGTLDYRL
ISQERYTR+ILEKFNMMNSKSVATPIETGTKLSKHEEGDDVD SYFKSLV SLRYLTCT+PDILF VGLVS FMESPTTTHLKV KRILRYLRGTLDY L
Subjt: ISQERYTREILEKFNMMNSKSVATPIETGTKLSKHEEGDDVDLSYFKSLVRSLRYLTCTQPDILFRVGLVSLFMESPTTTHLKVAKRILRYLRGTLDYRL
Query: FYSSSKEFKLEGYCDSDWAGDTDDRKSTSQYVFFVGNTAFTWSSKKQPIVTLSTSNRCVAPPSSSSC
FYSSSKEFKLEGYCDSDWAGDT+DRKSTS YVFF+GNTAFTWSSKKQPIVTLST +S C
Subjt: FYSSSKEFKLEGYCDSDWAGDTDDRKSTSQYVFFVGNTAFTWSSKKQPIVTLSTSNRCVAPPSSSSC
|
|
| A0A5A7V8Y7 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 9.3e-243 | 46.63 | Show/hide |
Query: MKALLGSQDVWDIVSNGYEEPESDAALNQVEREVFQNTRKKYQKALTIIHQAINDNNFEKISGATTAYQAWKILENTYKGVDRVK---------------
MKALLGSQDVWDIVSNGYEEPESDAALNQ +RE QNTRKKYQKALTIIHQAI+DNNFEKISGATTAYQAW+ILENTYKGVDRVK
Subjt: MKALLGSQDVWDIVSNGYEEPESDAALNQVEREVFQNTRKKYQKALTIIHQAINDNNFEKISGATTAYQAWKILENTYKGVDRVK---------------
Query: -------------------------------------------------------KDLSKMSINRLMGSLQVHEEKLLKKNKQMTEQLFQSKLKLKDKED
KDLS MSI++LMGSLQ HEEKLLKKNKQMTE+LFQSKLKLKDKE
Subjt: -------------------------------------------------------KDLSKMSINRLMGSLQVHEEKLLKKNKQMTEQLFQSKLKLKDKED
Query: NLEKGNRG------RGRGDFK-----------------------------------------------------------------------------VE
+LEKGNRG RGRGDFK VE
Subjt: NLEKGNRG------RGRGDFK-----------------------------------------------------------------------------VE
Query: VEEA----------------------------------------TVKENLIKV-----------------------------------------IQTQIH
++E+ +K N++ + IQT +
Subjt: VEEA----------------------------------------TVKENLIKV-----------------------------------------IQTQIH
Query: QEVE--------------------------EDNIIRG------------------------------------------QLGKDQIMTGGMTKDRLNVII
+ ++ N+++G K++ GM K R ++
Subjt: QEVE--------------------------EDNIIRG------------------------------------------QLGKDQIMTGGMTKDRLNVII
Query: VINSAIVL------------------------------------GNAEIELKKMQIMLRKMKKAKCKKMPKEFWAQAVECAVYLSNRCPTRSLWNKTPEE
S + N +E K I+ KCKKMPKEFWAQAVECAVYLSNR P RSLWNKTP++
Subjt: VINSAIVL------------------------------------GNAEIELKKMQIMLRKMKKAKCKKMPKEFWAQAVECAVYLSNRCPTRSLWNKTPEE
Query: AWIGRKPSIGYLRVFGCMAYAYIPDQKRSKLDDKSEKYVFVGYDASSKVYKFYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYKILFFPEDRDEPSDIAS
AWIGRKPSIG+LRVFGCMAYA+IPDQKRSKLDDKSEKYVFVGYDASSK YK YNPVTKKTIVSRDVVFDEEASWNWNDEPEDYK LFFP++RDEPSDIAS
Subjt: AWIGRKPSIGYLRVFGCMAYAYIPDQKRSKLDDKSEKYVFVGYDASSKVYKFYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYKILFFPEDRDEPSDIAS
Query: PPTLPITPQQSTSSSSASSSEAPCSMRSLRDIYDETEELSQSFNNLTLFCLFGDNEPLNFEEASQNDKWTIVMDEEIKVIKKNDTWELSTLPNGKKAI--
PPT PITPQQSTSSSSASSSE P MRSL+DIYDETEELSQSFNNLTLFCLFGD+EPLNFEEASQNDKW I MDE+IK IKKNDTWELSTLPNGKKA+
Subjt: PPTLPITPQQSTSSSSASSSEAPCSMRSLRDIYDETEELSQSFNNLTLFCLFGDNEPLNFEEASQNDKWTIVMDEEIKVIKKNDTWELSTLPNGKKAI--
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------GNCTSMFKDLKNAMTQEFEMTDIGLMSYYLSIEVKQSEEGIF
GNC SMF+DLKNAMTQEFEMTDIGLMSYYL IEVKQSEEGIF
Subjt: ----------------------------------------------------------GNCTSMFKDLKNAMTQEFEMTDIGLMSYYLSIEVKQSEEGIF
Query: ISQERYTREILEKFNMMNSKSVATPIETGTKLSKHEEGDDVDLSYFKSLVRSLRYLTCTQPDILFRVGLVSLFMESPTTTHLKVAKRILRYLRGTLDYRL
ISQERYTREILEKFNMMNSK VATPIETGTKLSKHEEGDDVD SYFKSLV SLRYLTCT+PDILF VGLVS FMESPTTTHLKVAKRILRYLRGTLDY L
Subjt: ISQERYTREILEKFNMMNSKSVATPIETGTKLSKHEEGDDVDLSYFKSLVRSLRYLTCTQPDILFRVGLVSLFMESPTTTHLKVAKRILRYLRGTLDYRL
Query: FYSSSKEFKLEGYCDSDWAGDTDDRKSTSQYVFFVGNTAFTWSSKKQPIVTLSTSNRCVAPPSSSSCR----RALLHRPCIVDRSPAL
FYSSSKEFKLEGYCDSDWAGDT+DRKSTS YVFF+GNTAFTWSSKKQPIVTLST +S C R LL I+ P +
Subjt: FYSSSKEFKLEGYCDSDWAGDTDDRKSTSQYVFFVGNTAFTWSSKKQPIVTLSTSNRCVAPPSSSSCR----RALLHRPCIVDRSPAL
|
|
| A0A5D3CJ69 Copia protein | 4.5e-245 | 48.75 | Show/hide |
Query: MKALLGSQDVWDIVSNGYEEPESDAALNQVEREVFQNTRKKYQKALTIIHQAINDNNFEKISGATTAYQAWKILENTYKGVDRVK---------------
MKALLGSQDVWDIVSNGYEEPESDAALNQ +RE QNTRKK QKALTIIHQAI+DNNFEKIS ATTAYQAW+ILENTYKGVDRVK
Subjt: MKALLGSQDVWDIVSNGYEEPESDAALNQVEREVFQNTRKKYQKALTIIHQAINDNNFEKISGATTAYQAWKILENTYKGVDRVK---------------
Query: -------------------------------------------------------KDLSKMSINRLMGSLQVHEEKLLKKNKQMTEQLFQSKLKLKDKED
KDLS MSI++LMGSLQ H+E L KKNKQMTEQLFQSKLKLKDKED
Subjt: -------------------------------------------------------KDLSKMSINRLMGSLQVHEEKLLKKNKQMTEQLFQSKLKLKDKED
Query: NLEKGNRG------RGRGDFK-------------------------------------------------------------------------------
LEKGNRG RGRGDFK
Subjt: NLEKGNRG------RGRGDFK-------------------------------------------------------------------------------
Query: -----------------VEVEEAT--------------------------------------VKENLIKVI-------------------QTQIHQE---
VE++E+ ++N++K + + QE
Subjt: -----------------VEVEEAT--------------------------------------VKENLIKVI-------------------QTQIHQE---
Query: --------------VEEDNIIRGQLGKDQIMT----------------GGMTKDRLNVIIVINSA--------IVLGNAEIELKKMQIMLRKMKKAKCKK
V+E + + G + + + G T + V N N +E K I+ KCKK
Subjt: --------------VEEDNIIRGQLGKDQIMT----------------GGMTKDRLNVIIVINSA--------IVLGNAEIELKKMQIMLRKMKKAKCKK
Query: MPKEFWAQAVECAVYLSNRCPTRSLWNKTPEEAWIGRKPSIGYLRVFGCMAYAYIPDQKRSKLDDKSEKYVFVGYDASSKVYKFYNPVTKKTIVSRDVVF
MPKEFWAQAVECAVYLSNR PTRSLWNKTP++AW GRKPSIG+LRVFGCMAYA+IPDQKRSKLDDKSEKYVFVGYDASSK YK YNPVTKKTIVSRDVVF
Subjt: MPKEFWAQAVECAVYLSNRCPTRSLWNKTPEEAWIGRKPSIGYLRVFGCMAYAYIPDQKRSKLDDKSEKYVFVGYDASSKVYKFYNPVTKKTIVSRDVVF
Query: DEEASWNWNDEPEDYKILFFPEDRDEPSDIASPPTLPITPQQSTSSSSASSSEAPCSMRSLRDIYDETEELSQSFNNLTLFCLFGDNEPLNFEEASQNDK
DEEASWNWNDEPEDYK L FP++ DEPSDIASPPT PITPQQSTSSSSASSSE P MRSL+DIYDETEELSQSFNNLTLFCLF D+EPLNFEEASQNDK
Subjt: DEEASWNWNDEPEDYKILFFPEDRDEPSDIASPPTLPITPQQSTSSSSASSSEAPCSMRSLRDIYDETEELSQSFNNLTLFCLFGDNEPLNFEEASQNDK
Query: WTIVMDEEIKVIKKNDTWELSTLPNGKKAI----------------------------------------------------------------------
W I MDEEIK IKKNDTWELSTLPNGKKA+
Subjt: WTIVMDEEIKVIKKNDTWELSTLPNGKKAI----------------------------------------------------------------------
Query: ------------------------------------------------------------------------------------------GNCTSMFKDL
GNC SMF+DL
Subjt: ------------------------------------------------------------------------------------------GNCTSMFKDL
Query: KNAMTQEFEMTDIGLMSYYLSIEVKQSEEGIFISQERYTREILEKFNMMNSKSVATPIETGTKLSKHEEGDDVDLSYFKSLVRSLRYLTCTQPDILFRVG
K AMTQEFEMTDIGLMSYYL IEVKQSEEGIFISQERYTREILEKFNMMNSK VATPIETGTKLSKHEEGDDVD SYFKSLV SLRYLTCT+PDILF VG
Subjt: KNAMTQEFEMTDIGLMSYYLSIEVKQSEEGIFISQERYTREILEKFNMMNSKSVATPIETGTKLSKHEEGDDVDLSYFKSLVRSLRYLTCTQPDILFRVG
Query: LVSLFMESPTTTHLKVAKRILRYLRGTLDYRLFYSSSKEFKLEGYCDSDWAGDTDDRKSTSQYVFFVGNTAFTWSSKKQPIVTLSTSNRCVAPPSSSSCR
LVS FMESPTTTHLKVAKRILRYLRGTLDY LFYSSSKEFKLEGYCDSDWAGDT+DRKSTS YVFF+GNTAFTWSSKKQPIVTLST +S C
Subjt: LVSLFMESPTTTHLKVAKRILRYLRGTLDYRLFYSSSKEFKLEGYCDSDWAGDTDDRKSTSQYVFFVGNTAFTWSSKKQPIVTLSTSNRCVAPPSSSSCR
Query: ----RALLHRPCIVDRSPAL
R LL I+ P +
Subjt: ----RALLHRPCIVDRSPAL
|
|
| A0A5D3E4P4 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 0.0e+00 | 100 | Show/hide |
Query: MPKEFWAQAVECAVYLSNRCPTRSLWNKTPEEAWIGRKPSIGYLRVFGCMAYAYIPDQKRSKLDDKSEKYVFVGYDASSKVYKFYNPVTKKTIVSRDVVF
MPKEFWAQAVECAVYLSNRCPTRSLWNKTPEEAWIGRKPSIGYLRVFGCMAYAYIPDQKRSKLDDKSEKYVFVGYDASSKVYKFYNPVTKKTIVSRDVVF
Subjt: MPKEFWAQAVECAVYLSNRCPTRSLWNKTPEEAWIGRKPSIGYLRVFGCMAYAYIPDQKRSKLDDKSEKYVFVGYDASSKVYKFYNPVTKKTIVSRDVVF
Query: DEEASWNWNDEPEDYKILFFPEDRDEPSDIASPPTLPITPQQSTSSSSASSSEAPCSMRSLRDIYDETEELSQSFNNLTLFCLFGDNEPLNFEEASQNDK
DEEASWNWNDEPEDYKILFFPEDRDEPSDIASPPTLPITPQQSTSSSSASSSEAPCSMRSLRDIYDETEELSQSFNNLTLFCLFGDNEPLNFEEASQNDK
Subjt: DEEASWNWNDEPEDYKILFFPEDRDEPSDIASPPTLPITPQQSTSSSSASSSEAPCSMRSLRDIYDETEELSQSFNNLTLFCLFGDNEPLNFEEASQNDK
Query: WTIVMDEEIKVIKKNDTWELSTLPNGKKAIGNCTSMFKDLKNAMTQEFEMTDIGLMSYYLSIEVKQSEEGIFISQERYTREILEKFNMMNSKSVATPIET
WTIVMDEEIKVIKKNDTWELSTLPNGKKAIGNCTSMFKDLKNAMTQEFEMTDIGLMSYYLSIEVKQSEEGIFISQERYTREILEKFNMMNSKSVATPIET
Subjt: WTIVMDEEIKVIKKNDTWELSTLPNGKKAIGNCTSMFKDLKNAMTQEFEMTDIGLMSYYLSIEVKQSEEGIFISQERYTREILEKFNMMNSKSVATPIET
Query: GTKLSKHEEGDDVDLSYFKSLVRSLRYLTCTQPDILFRVGLVSLFMESPTTTHLKVAKRILRYLRGTLDYRLFYSSSKEFKLEGYCDSDWAGDTDDRKST
GTKLSKHEEGDDVDLSYFKSLVRSLRYLTCTQPDILFRVGLVSLFMESPTTTHLKVAKRILRYLRGTLDYRLFYSSSKEFKLEGYCDSDWAGDTDDRKST
Subjt: GTKLSKHEEGDDVDLSYFKSLVRSLRYLTCTQPDILFRVGLVSLFMESPTTTHLKVAKRILRYLRGTLDYRLFYSSSKEFKLEGYCDSDWAGDTDDRKST
Query: SQYVFFVGNTAFTWSSKKQPIVTLSTSNRCVAPPSSSSCRRALLHRPCIVDRSPALRSSAGDRADHPRLISRPPFVELRQSSASLPEALLRTSEPSHPSK
SQYVFFVGNTAFTWSSKKQPIVTLSTSNRCVAPPSSSSCRRALLHRPCIVDRSPALRSSAGDRADHPRLISRPPFVELRQSSASLPEALLRTSEPSHPSK
Subjt: SQYVFFVGNTAFTWSSKKQPIVTLSTSNRCVAPPSSSSCRRALLHRPCIVDRSPALRSSAGDRADHPRLISRPPFVELRQSSASLPEALLRTSEPSHPSK
Query: PVASALRPHLTSRFLGRAAEPRVSKPYLREPYPSASHTRVL
PVASALRPHLTSRFLGRAAEPRVSKPYLREPYPSASHTRVL
Subjt: PVASALRPHLTSRFLGRAAEPRVSKPYLREPYPSASHTRVL
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 2.3e-25 | 33.5 | Show/hide |
Query: AIGNCTSMFKDLKNAMTQEFEMTDIGLMSYYLSIEVKQSEEGIFISQERYTREILEKFNMMNSKSVATPIETGTKLSKHEEGDDVDLSYFKSLVRSLRY-
A G+ T M + K + ++F MTD+ + +++ I ++ E+ I++SQ Y ++IL KFNM N +V+TP+ + +D + + +SL+ L Y
Subjt: AIGNCTSMFKDLKNAMTQEFEMTDIGLMSYYLSIEVKQSEEGIFISQERYTREILEKFNMMNSKSVATPIETGTKLSKHEEGDDVDLSYFKSLVRSLRY-
Query: LTCTQPDILFRVGLVSLFMESPTTTHLKVAKRILRYLRGTLDYRLFYSSSKEF--KLEGYCDSDWAGDTDDRKSTSQYVFFVGN-TAFTWSSKKQPIVTL
+ CT+PD+ V ++S + + + KR+LRYL+GT+D +L + + F K+ GY DSDWAG DRKST+ Y+F + + W++K+Q V
Subjt: LTCTQPDILFRVGLVSLFMESPTTTHLKVAKRILRYLRGTLDYRLFYSSSKEF--KLEGYCDSDWAGDTDDRKSTSQYVFFVGN-TAFTWSSKKQPIVTL
Query: STS
S++
Subjt: STS
|
|
| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.3e-43 | 25.7 | Show/hide |
Query: NAEIELKKMQIMLRKMKKAKCKKMPKEFWAQAVECAVYLSNRCPTRSLWNKTPEEAWIGRKPSIGYLRVFGCMAYAYIPDQKRSKLDDKSEKYVFVGYDA
N E I+ + + K+PK FW +AV+ A YL NR P+ L + PE W ++ S +L+VFGC A+A++P ++R+KLDDKS +F+GY
Subjt: NAEIELKKMQIMLRKMKKAKCKKMPKEFWAQAVECAVYLSNRCPTRSLWNKTPEEAWIGRKPSIGYLRVFGCMAYAYIPDQKRSKLDDKSEKYVFVGYDA
Query: SSKVYKFYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYKILFFPEDRDEPSDIASPPTLPITPQQSTSSSSASSSEAPCSMRSLRDIYDE-TEEL-----
Y+ ++PV KK I SRDVVF E D E K P PS +P T +ST+ + E P + + DE EE+
Subjt: SSKVYKFYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYKILFFPEDRDEPSDIASPPTLPITPQQSTSSSSASSSEAPCSMRSLRDIYDE-TEEL-----
Query: -----------------SQSFNNLTLFCLFGDNEPLNFEEA---SQNDKWTIVMDEEIKVIKKNDTWELSTLPNGKKAI-----------GNC-------
S+ + + + D EP + +E + ++ M EE++ ++KN T++L LP GK+ + G+C
Subjt: -----------------SQSFNNLTLFCLFGDNEPLNFEEA---SQNDKWTIVMDEEIKVIKKNDTWELSTLPNGKKAI-----------GNC-------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ------------------------------------------TSMFKDLKNAMTQEFEMTDIGLMSYYLSIEV--KQSEEGIFISQERYTREILEKFNMM
+ LK +++ F+M D+G L +++ +++ +++SQE+Y +LE+FNM
Subjt: ------------------------------------------TSMFKDLKNAMTQEFEMTDIGLMSYYLSIEV--KQSEEGIFISQERYTREILEKFNMM
Query: NSKSVATPIETGTKLSK-------HEEGDDVDLSYFKSLVRSLRY-LTCTQPDILFRVGLVSLFMESPTTTHLKVAKRILRYLRGTLDYRLFYSSSKEFK
N+K V+TP+ KLSK E+G+ + Y S V SL Y + CT+PDI VG+VS F+E+P H + K ILRYLRGT L + S
Subjt: NSKSVATPIETGTKLSK-------HEEGDDVDLSYFKSLVRSLRY-LTCTQPDILFRVGLVSLFMESPTTTHLKVAKRILRYLRGTLDYRLFYSSSKEFK
Query: LEGYCDSDWAGDTDDRKSTSQYVFFVGNTAFTWSSKKQPIVTLSTS
L+GY D+D AGD D+RKS++ Y+F A +W SK Q V LST+
Subjt: LEGYCDSDWAGDTDDRKSTSQYVFFVGNTAFTWSSKKQPIVTLSTS
|
|
| P92519 Uncharacterized mitochondrial protein AtMg00810 | 3.2e-30 | 34.17 | Show/hide |
Query: GNCTSMFKDLKNAMTQEFEMTDIGLMSYYLSIEVKQSEEGIFISQERYTREILEKFNMMNSKSVAT--PIETGTKLSKHEEGDDVDLSYFKSLVRSLRYL
G+ ++ L ++ F M D+G + Y+L I++K G+F+SQ +Y +IL M++ K ++T P++ + +S + D D F+S+V +L+YL
Subjt: GNCTSMFKDLKNAMTQEFEMTDIGLMSYYLSIEVKQSEEGIFISQERYTREILEKFNMMNSKSVAT--PIETGTKLSKHEEGDDVDLSYFKSLVRSLRYL
Query: TCTQPDILFRVGLVSLFMESPTTTHLKVAKRILRYLRGTLDYRLFYSSSKEFKLEGYCDSDWAGDTDDRKSTSQYVFFVGNTAFTWSSKKQPIVTLSTS
T T+PDI + V +V M PT + KR+LRY++GT+ + L+ + + ++ +CDSDWAG T R+ST+ + F+G +WS+K+QP V+ S++
Subjt: TCTQPDILFRVGLVSLFMESPTTTHLKVAKRILRYLRGTLDYRLFYSSSKEFKLEGYCDSDWAGDTDDRKSTSQYVFFVGNTAFTWSSKKQPIVTLSTS
|
|
| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 6.8e-33 | 38.28 | Show/hide |
Query: GNCTSMFKDLKNAMTQEFEMTDIGLMSYYLSIEVKQSEEGIFISQERYTREILEKFNMMNSKSVATPIETGTKLSKHEEGDDVDLSYFKSLVRSLRYLTC
GN ++ + + ++Q F + D + Y+L IE K+ G+ +SQ RY ++L + NM+ +K V TP+ KLS + D + ++ +V SL+YL
Subjt: GNCTSMFKDLKNAMTQEFEMTDIGLMSYYLSIEVKQSEEGIFISQERYTREILEKFNMMNSKSVATPIETGTKLSKHEEGDDVDLSYFKSLVRSLRYLTC
Query: TQPDILFRVGLVSLFMESPTTTHLKVAKRILRYLRGTLDYRLFYSSSKEFKLEGYCDSDWAGDTDDRKSTSQYVFFVGNTAFTWSSKKQPIVTLSTSN--
T+PDI + V +S FM PT HL+ KRILRYL GT ++ +F L Y D+DWAGD DD ST+ Y+ ++G+ +WSSKKQ V S++
Subjt: TQPDILFRVGLVSLFMESPTTTHLKVAKRILRYLRGTLDYRLFYSSSKEFKLEGYCDSDWAGDTDDRKSTSQYVFFVGNTAFTWSSKKQPIVTLSTSN--
Query: -RCVAPPSS
R VA SS
Subjt: -RCVAPPSS
|
|
| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 2.1e-13 | 32.43 | Show/hide |
Query: MPKEFWAQAVECAVYLSNRCPTRSLWNKTPEEAWIGRKPSIGYLRVFGCMAYAYIPDQKRSKLDDKSEKYVFVGYDASSKVYKFYNPVTKKTIVSRDVVF
+PK +W A AVYL NR PT L ++P + G P+ LRVFGC Y ++ + KLDDKS + VF+GY + Y + T + +SR V F
Subjt: MPKEFWAQAVECAVYLSNRCPTRSLWNKTPEEAWIGRKPSIGYLRVFGCMAYAYIPDQKRSKLDDKSEKYVFVGYDASSKVYKFYNPVTKKTIVSRDVVF
Query: DEEASWNWNDEP-EDYKILFFP--EDRDEPSDIASPPT-----LPITPQQSTSSSSASSSEAPCSMRSLRDIYDETEELSQSFNN
DE N P +Y P E R E S + SP T P+ P S S +++ R+ + L SF++
Subjt: DEEASWNWNDEP-EDYKILFFP--EDRDEPSDIASPPT-----LPITPQQSTSSSSASSSEAPCSMRSLRDIYDETEELSQSFNN
|
|
| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 5.0e-36 | 39.71 | Show/hide |
Query: GNCTSMFKDLKNAMTQEFEMTDIGLMSYYLSIEVKQSEEGIFISQERYTREILEKFNMMNSKSVATPIETGTKLSKHEEGDDVDLSYFKSLVRSLRYLTC
GN T + K +A++Q F + + + Y+L IE K+ +G+ +SQ RYT ++L + NM+ +K VATP+ T KL+ H D + ++ +V SL+YL
Subjt: GNCTSMFKDLKNAMTQEFEMTDIGLMSYYLSIEVKQSEEGIFISQERYTREILEKFNMMNSKSVATPIETGTKLSKHEEGDDVDLSYFKSLVRSLRYLTC
Query: TQPDILFRVGLVSLFMESPTTTHLKVAKRILRYLRGTLDYRLFYSSSKEFKLEGYCDSDWAGDTDDRKSTSQYVFFVGNTAFTWSSKKQPIVTLSTSN--
T+PD+ + V +S +M PT H KR+LRYL GT D+ +F L Y D+DWAGDTDD ST+ Y+ ++G+ +WSSKKQ V S++
Subjt: TQPDILFRVGLVSLFMESPTTTHLKVAKRILRYLRGTLDYRLFYSSSKEFKLEGYCDSDWAGDTDDRKSTSQYVFFVGNTAFTWSSKKQPIVTLSTSN--
Query: -RCVAPPSS
R VA SS
Subjt: -RCVAPPSS
|
|
| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G48720.1 unknown protein | 8.9e-12 | 43.28 | Show/hide |
Query: MKALLGSQDVWDIVSNGYEEPESDAALNQVEREVFQNTRKKYQKALTIIHQAINDNNFEKISGATTA
MKA+LG+ DVW+IV G+ EPE++ +L+Q +++ +++RK+ +KAL +I+Q ++++ FEK+ AT+A
Subjt: MKALLGSQDVWDIVSNGYEEPESDAALNQVEREVFQNTRKKYQKALTIIHQAINDNNFEKISGATTA
|
|
| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 7.2e-30 | 33.86 | Show/hide |
Query: DLKNAMTQEFEMTDIGLMSYYLSIEVKQSEEGIFISQERYTREILEKFNMMNSKSVATPIETGTKLSKHEEGDDVDLSYFKSLVRSLRYLTCTQPDILFR
+LK+ + F++ D+G + Y+L +E+ +S GI I Q +Y ++L++ ++ K + P++ S H GD VD ++ L+ L YL T+ DI F
Subjt: DLKNAMTQEFEMTDIGLMSYYLSIEVKQSEEGIFISQERYTREILEKFNMMNSKSVATPIETGTKLSKHEEGDDVDLSYFKSLVRSLRYLTCTQPDILFR
Query: VGLVSLFMESPTTTHLKVAKRILRYLRGTLDYRLFYSSSKEFKLEGYCDSDWAGDTDDRKSTSQYVFFVGNTAFTWSSKKQPIVTLSTS
V +S F E+P H + +IL Y++GT+ LFYSS E +L+ + D+ + D R+ST+ Y F+G + +W SKKQ +V+ S++
Subjt: VGLVSLFMESPTTTHLKVAKRILRYLRGTLDYRLFYSSSKEFKLEGYCDSDWAGDTDDRKSTSQYVFFVGNTAFTWSSKKQPIVTLSTS
|
|
| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 6.2e-05 | 36.49 | Show/hide |
Query: YDETEELSQSFNNLTLFCLFGDNEPLNFEEASQNDKWTIVMDEEIKVIKKNDTWELSTLPNGKKAIGNCTSMFK
Y++ L SF L C+ EP + EA + W MD+EI ++ TWE+ TLP KK IG C ++K
Subjt: YDETEELSQSFNNLTLFCLFGDNEPLNFEEASQNDKWTIVMDEEIKVIKKNDTWELSTLPNGKKAIGNCTSMFK
|
|
| ATMG00240.1 Gag-Pol-related retrotransposon family protein | 1.7e-10 | 35.8 | Show/hide |
Query: YLTCTQPDILFRVGLVSLFMESPTTTHLKVAKRILRYLRGTLDYRLFYSSSKEFKLEGYCDSDWAGDTDDRKSTSQYVFFV
YLT T+PD+ F V +S F + T ++ ++L Y++GT+ LFYS++ + +L+ + DSDWA D R+S + + V
Subjt: YLTCTQPDILFRVGLVSLFMESPTTTHLKVAKRILRYLRGTLDYRLFYSSSKEFKLEGYCDSDWAGDTDDRKSTSQYVFFV
|
|
| ATMG00710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein | 1.1e-06 | 31.71 | Show/hide |
Query: MLRKMKKAKCK-KMPKEFWAQAVECAVYLSNRCPTRSLWNKTPEEAWIGRKPSIGYLRVFGCMAYAYIPDQKRSKLDDKSEK
++ K++ C+ +PK F A A AV++ N+ P+ ++ P+E W P+ YLR FGC+AY + + K K E+
Subjt: MLRKMKKAKCK-KMPKEFWAQAVECAVYLSNRCPTRSLWNKTPEEAWIGRKPSIGYLRVFGCMAYAYIPDQKRSKLDDKSEK
|
|
| ATMG00810.1 DNA/RNA polymerases superfamily protein | 2.2e-31 | 34.17 | Show/hide |
Query: GNCTSMFKDLKNAMTQEFEMTDIGLMSYYLSIEVKQSEEGIFISQERYTREILEKFNMMNSKSVAT--PIETGTKLSKHEEGDDVDLSYFKSLVRSLRYL
G+ ++ L ++ F M D+G + Y+L I++K G+F+SQ +Y +IL M++ K ++T P++ + +S + D D F+S+V +L+YL
Subjt: GNCTSMFKDLKNAMTQEFEMTDIGLMSYYLSIEVKQSEEGIFISQERYTREILEKFNMMNSKSVAT--PIETGTKLSKHEEGDDVDLSYFKSLVRSLRYL
Query: TCTQPDILFRVGLVSLFMESPTTTHLKVAKRILRYLRGTLDYRLFYSSSKEFKLEGYCDSDWAGDTDDRKSTSQYVFFVGNTAFTWSSKKQPIVTLSTS
T T+PDI + V +V M PT + KR+LRY++GT+ + L+ + + ++ +CDSDWAG T R+ST+ + F+G +WS+K+QP V+ S++
Subjt: TCTQPDILFRVGLVSLFMESPTTTHLKVAKRILRYLRGTLDYRLFYSSSKEFKLEGYCDSDWAGDTDDRKSTSQYVFFVGNTAFTWSSKKQPIVTLSTS
|
|
