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IVF0001036 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0001036
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionCACTA en-spm transposon protein
Genome locationchr10:15539849..15540156
RNA-Seq ExpressionIVF0001036
SyntenyIVF0001036
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051366.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]1.07e-0543.4Show/hide
Query:  MASQTTSGVRRA-----------------PNTISDSSRMASGVRGSSDVFVLRREFPFKRDKEEDKSSIDETKRGENICHLRRCPHRSEPAVVSHLPYAT
        MAS  +SGVRRA                 P+TISDSSR   GVRGS DVFVLRRE            S   T R EN       P   +PAVV   P  T
Subjt:  MASQTTSGVRRA-----------------PNTISDSSRMASGVRGSSDVFVLRREFPFKRDKEEDKSSIDETKRGENICHLRRCPHRSEPAVVSHLPYAT

Query:  THSYLR
         H YLR
Subjt:  THSYLR
KAA0053092.1 uncharacterized protein E6C27_scaffold778G00180 [Cucumis melo var. makuwa]3.55e-0552.08Show/hide
Query:  KRDKEEDKSSIDETKRGENICHLRRCPHRSEPAVVSHLPYATTHSYLR
        K  +E++ +S+DETKRGE      RC  R EPAVV   P+AT H YLR
Subjt:  KRDKEEDKSSIDETKRGENICHLRRCPHRSEPAVVSHLPYATTHSYLR
TYK23854.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]5.25e-0646.23Show/hide
Query:  MASQTTSGVRRA-----------------PNTISDSSRMASGVRGSSDVFVLRREFPFKRDKEEDKSSIDETKRGENICHLRRCPHRSEPAVVSHLPYAT
        MAS  +SGVRRA                 P+TISDSSR A GVRGS DVFVLRR       KE D  S   T R EN       P   +PAVV   P  T
Subjt:  MASQTTSGVRRA-----------------PNTISDSSRMASGVRGSSDVFVLRREFPFKRDKEEDKSSIDETKRGENICHLRRCPHRSEPAVVSHLPYAT

Query:  THSYLR
         H YLR
Subjt:  THSYLR
TYK29947.1 uncharacterized protein E5676_scaffold588G00110 [Cucumis melo var. makuwa]2.01e-0552.08Show/hide
Query:  KRDKEEDKSSIDETKRGENICHLRRCPHRSEPAVVSHLPYATTHSYLR
        K  +E++ +S+DETKRGE      RC  R EPAVV   P+AT H YLR
Subjt:  KRDKEEDKSSIDETKRGENICHLRRCPHRSEPAVVSHLPYATTHSYLR
TrEMBL top hitse value%identityAlignment
A0A5A7UAZ2 CACTA en-spm transposon protein1.8e-0443.4Show/hide
Query:  MASQTTSGVRRA-----------------PNTISDSSRMASGVRGSSDVFVLRREFPFKRDKEEDKSSIDETKRGENICHLRRCPHRSEPAVVSHLPYAT
        MAS  +SGVRRA                 P+TISDSSR   GVRGS DVFVLRRE            S   T R EN       P   +PAVV   P  T
Subjt:  MASQTTSGVRRA-----------------PNTISDSSRMASGVRGSSDVFVLRREFPFKRDKEEDKSSIDETKRGENICHLRRCPHRSEPAVVSHLPYAT

Query:  THSYLR
         H YLR
Subjt:  THSYLR
A0A5D3DJN9 CACTA en-spm transposon protein1.8e-0446.23Show/hide
Query:  MASQTTSGVRRA-----------------PNTISDSSRMASGVRGSSDVFVLRREFPFKRDKEEDKSSIDETKRGENICHLRRCPHRSEPAVVSHLPYAT
        MAS  +SGVRRA                 P+TISDSSR A GVRGS DVFVLRR       KE D  S   T R EN       P   +PAVV   P  T
Subjt:  MASQTTSGVRRA-----------------PNTISDSSRMASGVRGSSDVFVLRREFPFKRDKEEDKSSIDETKRGENICHLRRCPHRSEPAVVSHLPYAT

Query:  THSYLR
         H YLR
Subjt:  THSYLR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCGCAAACAACGTCGGGAGTAAGAAGAGCTCCCAACACCATTAGTGATTCGTCAAGAATGGCCTCGGGAGTAAGGGGATCTTCTGATGTTTTCGTGTTGCGTCG
GGAGTTCCCATTTAAAAGAGATAAAGAGGAAGATAAGAGTTCGATCGACGAAACAAAGAGAGGAGAAAATATTTGTCATCTTCGTCGTTGCCCTCACCGCAGTGAGCCTG
CCGTCGTGTCTCACCTACCGTATGCCACCACACATTCCTATTTGAGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCGCAAACAACGTCGGGAGTAAGAAGAGCTCCCAACACCATTAGTGATTCGTCAAGAATGGCCTCGGGAGTAAGGGGATCTTCTGATGTTTTCGTGTTGCGTCG
GGAGTTCCCATTTAAAAGAGATAAAGAGGAAGATAAGAGTTCGATCGACGAAACAAAGAGAGGAGAAAATATTTGTCATCTTCGTCGTTGCCCTCACCGCAGTGAGCCTG
CCGTCGTGTCTCACCTACCGTATGCCACCACACATTCCTATTTGAGGTAA
Protein sequenceShow/hide protein sequence
MASQTTSGVRRAPNTISDSSRMASGVRGSSDVFVLRREFPFKRDKEEDKSSIDETKRGENICHLRRCPHRSEPAVVSHLPYATTHSYLR