; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0001077 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0001077
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr11:25348774..25349802
RNA-Seq ExpressionIVF0001077
SyntenyIVF0001077
Gene Ontology termsNA
InterPro domainsIPR000477 - Reverse transcriptase domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045532.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.13e-23792.04Show/hide
Query:  MDYLSRLLSHLETKGAIKGVSFNNCCNISHLLFADDVLIFVEDNEKYLSNLQMALSLFEKASGLTFNHSKSTISPINISADRTDQIARFFGFQTKFLPFN
        MDYLSRLLSHLE+KGAIKGVSFNNCCNISHLLFADDVLIFVEDNE+YL+NLQMAL+LFEKASGLTFN+SKSTISPINISA RTDQIA FFGFQTKFLP N
Subjt:  MDYLSRLLSHLETKGAIKGVSFNNCCNISHLLFADDVLIFVEDNEKYLSNLQMALSLFEKASGLTFNHSKSTISPINISADRTDQIARFFGFQTKFLPFN

Query:  YLGVPLGGNPRSRSFWGQTIECIHKKLNGWKYSQISKRGRLTLLKASLSSLPTYQLSTFKAPVSVYKEIEKHWRDFLWGGSEDKQNAHLVNWRICTSPKE
        YLGVPLGGNPRSRSFW QTIECIHKKLNGWKYSQISK GRLTLLKASLSSLPTYQLSTFKAPVSVYKEIEKHWRDFLWGGSEDKQNAHL+NW ICTSPKE
Subjt:  YLGVPLGGNPRSRSFWGQTIECIHKKLNGWKYSQISKRGRLTLLKASLSSLPTYQLSTFKAPVSVYKEIEKHWRDFLWGGSEDKQNAHLVNWRICTSPKE

Query:  LGGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDIPIVGRNCSVKSPWNAIKKWKDWFESKISWIPNDGSSLSFWHSKWQNNIPLSH
        LGG+GISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDIP+VGRN S  SPWNAIKKWKDW+ESKISWIPNDGSSLSFWHSKW NNIPLS 
Subjt:  LGGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDIPIVGRNCSVKSPWNAIKKWKDWFESKISWIPNDGSSLSFWHSKWQNNIPLSH

Query:  QIPRLYALSNLQSATVKEVWDQSTDGWNINPRRPLNERE
        QIPRLYALSN+QSATVKE+WDQ +D WN+ PRRPLNERE
Subjt:  QIPRLYALSNLQSATVKEVWDQSTDGWNINPRRPLNERE

KAA0056839.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]3.22e-23290.86Show/hide
Query:  MDYLSRLLSHLETKGAIKGVSFNNCCNISHLLFADDVLIFVEDNEKYLSNLQMALSLFEKASGLTFNHSKSTISPINISADRTDQIARFFGFQTKFLPFN
        MDYLSRLLSHLE+KGAIKGVSFNN CNISHLLFADDVLIFVEDNE+YL+NLQMAL+LFEKASGLTFN+SKSTISPINISA RTDQIA FFGFQTKFLP N
Subjt:  MDYLSRLLSHLETKGAIKGVSFNNCCNISHLLFADDVLIFVEDNEKYLSNLQMALSLFEKASGLTFNHSKSTISPINISADRTDQIARFFGFQTKFLPFN

Query:  YLGVPLGGNPRSRSFWGQTIECIHKKLNGWKYSQISKRGRLTLLKASLSSLPTYQLSTFKAPVSVYKEIEKHWRDFLWGGSEDKQNAHLVNWRICTSPKE
        YLGVPLGGNPRSRSFW QTIECIHKKLNGWKYSQISK GRLTLLKASLSSLPTYQLSTFKAPVSVYKEIEKHWRDFLWGGSEDKQNAHL+NW ICTSPKE
Subjt:  YLGVPLGGNPRSRSFWGQTIECIHKKLNGWKYSQISKRGRLTLLKASLSSLPTYQLSTFKAPVSVYKEIEKHWRDFLWGGSEDKQNAHLVNWRICTSPKE

Query:  LGGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDIPIVGRNCSVKSPWNAIKKWKDWFESKISWIPNDGSSLSFWHSKWQNNIPLSH
        LGGLGISK+KDTNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDIP+VGRN S  SPWNAIKKWKDW+ESKISW+ NDGSSLSFWHSKW NNIPLS 
Subjt:  LGGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDIPIVGRNCSVKSPWNAIKKWKDWFESKISWIPNDGSSLSFWHSKWQNNIPLSH

Query:  QIPRLYALSNLQSATVKEVWDQSTDGWNINPRRPLNERE
        Q PRLYALSN+QSATVKE+WDQ +D WN+ PRRPLNERE
Subjt:  QIPRLYALSNLQSATVKEVWDQSTDGWNINPRRPLNERE

KAA0057507.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]5.31e-22492.04Show/hide
Query:  MDYLSRLLSHLETKGAIKGVSFNNCCNISHLLFADDVLIFVEDNEKYLSNLQMALSLFEKASGLTFNHSKSTISPINISADRTDQIARFFGFQTKFLPFN
        MDYLSRLLSHLE+KGAIKGVSFNNCCNISHLLFADDVLIFVEDNE+YL+NLQMAL+LFEKASGLTFN+SKSTISPINISA RTDQIA FFGFQTKFLP N
Subjt:  MDYLSRLLSHLETKGAIKGVSFNNCCNISHLLFADDVLIFVEDNEKYLSNLQMALSLFEKASGLTFNHSKSTISPINISADRTDQIARFFGFQTKFLPFN

Query:  YLGVPLGGNPRSRSFWGQTIECIHKKLNGWKYSQISKRGRLTLLKASLSSLPTYQLSTFKAPVSVYKEIEKHWRDFLWGGSEDKQNAHLVNWRICTSPKE
        YLGVPLGGNPRSRSFW QTIECIHKKLNGWKYSQISK GRLTLLKASLSSLPTYQLSTFKAPVSVYKEIEKHWRDFLWGGSEDKQNAHL+NW ICTSPKE
Subjt:  YLGVPLGGNPRSRSFWGQTIECIHKKLNGWKYSQISKRGRLTLLKASLSSLPTYQLSTFKAPVSVYKEIEKHWRDFLWGGSEDKQNAHLVNWRICTSPKE

Query:  LGGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDIPIVGRNCSVKSPWNAIKKWKDWFESKISWIPNDGSSLSFWHSKWQNNIPLSH
        LGGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDIP+VGRN S  SPWNAIKKWKDW+ESKISW+PNDGSSLSFWHSKW NNIPLS 
Subjt:  LGGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDIPIVGRNCSVKSPWNAIKKWKDWFESKISWIPNDGSSLSFWHSKWQNNIPLSH

Query:  QIPRLYALSNLQSATVKEVWDQSTDGWNINPRRPLNERE
        QIPRLYALSN+QSATVKE+WDQ +D WN+ PRRPLNERE
Subjt:  QIPRLYALSNLQSATVKEVWDQSTDGWNINPRRPLNERE

TYK10887.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]3.36e-23195.3Show/hide
Query:  MDYLSRLLSHLETKGAIKGVSFNNCCNISHLLFADDVLIFVEDNEKYLSNLQMALSLFEKASGLTFNHSKSTISPINISADRTDQIARFFGFQTKFLPFN
        MDYLSRLLSHLETKGAIKGVSFNNCCNISHLLFADDVLIFVEDNEKYL+NLQMAL LFEKASGLTFN  KSTI+PINISADRTDQIAR FGFQTKFLP N
Subjt:  MDYLSRLLSHLETKGAIKGVSFNNCCNISHLLFADDVLIFVEDNEKYLSNLQMALSLFEKASGLTFNHSKSTISPINISADRTDQIARFFGFQTKFLPFN

Query:  YLGVPLGGNPRSRSFWGQTIECIHKKLNGWKYSQISKRGRLTLLKASLSSLPTYQLSTFKAPVSVYKEIEKHWRDFLWGGSEDKQNAHLVNWRICTSPKE
        YLGVPLGGNPRSRSFWGQTIECIHKKLNGWKYSQI K GRLTLLKASLSSLPTYQLSTFKA VSVYKEIEKHWRDFLWGGSEDKQNAHL+NWRICTSPKE
Subjt:  YLGVPLGGNPRSRSFWGQTIECIHKKLNGWKYSQISKRGRLTLLKASLSSLPTYQLSTFKAPVSVYKEIEKHWRDFLWGGSEDKQNAHLVNWRICTSPKE

Query:  LGGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDIPIVGRNCSVKSPWNAIKKWKDWFESKISWIPNDGSSLSFWHSKWQNNIPLSH
        L GLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDIP+VGRN S KSPWNAIKKWKDWFESKISWIPNDGSSLSFWHSKWQNNIPLSH
Subjt:  LGGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDIPIVGRNCSVKSPWNAIKKWKDWFESKISWIPNDGSSLSFWHSKWQNNIPLSH

Query:  QIPRLYALSNLQSATVKEV
        QIPRLYALSNLQSATVKEV
Subjt:  QIPRLYALSNLQSATVKEV

TYK28859.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]5.28e-23691.74Show/hide
Query:  MDYLSRLLSHLETKGAIKGVSFNNCCNISHLLFADDVLIFVEDNEKYLSNLQMALSLFEKASGLTFNHSKSTISPINISADRTDQIARFFGFQTKFLPFN
        MDYLSRLLSHLE+KGAIKGVSFNN CNISHLLFADDVLIFVEDNE+YL+NLQMAL+LFEKASGLTFN+SKSTISPINISA RTDQIA FFGFQTKFLP N
Subjt:  MDYLSRLLSHLETKGAIKGVSFNNCCNISHLLFADDVLIFVEDNEKYLSNLQMALSLFEKASGLTFNHSKSTISPINISADRTDQIARFFGFQTKFLPFN

Query:  YLGVPLGGNPRSRSFWGQTIECIHKKLNGWKYSQISKRGRLTLLKASLSSLPTYQLSTFKAPVSVYKEIEKHWRDFLWGGSEDKQNAHLVNWRICTSPKE
        YLGVPLGGNPRSRSFW QTIECIHKKLNGWKYSQISK GRLTLLKASLSSLPTYQLSTFKAPVSVYKEIEKHWRDFLWGGSEDKQNAHL+NW ICTSPKE
Subjt:  YLGVPLGGNPRSRSFWGQTIECIHKKLNGWKYSQISKRGRLTLLKASLSSLPTYQLSTFKAPVSVYKEIEKHWRDFLWGGSEDKQNAHLVNWRICTSPKE

Query:  LGGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDIPIVGRNCSVKSPWNAIKKWKDWFESKISWIPNDGSSLSFWHSKWQNNIPLSH
        LGG+GISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDIP+VGRN S  SPWNAIKKWKDW+ESKISWIPNDGSSLSFWHSKW NNIPLS 
Subjt:  LGGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDIPIVGRNCSVKSPWNAIKKWKDWFESKISWIPNDGSSLSFWHSKWQNNIPLSH

Query:  QIPRLYALSNLQSATVKEVWDQSTDGWNINPRRPLNERE
        QIPRLYALSN+QSATVKE+WDQ +D WN+ PRRPLNERE
Subjt:  QIPRLYALSNLQSATVKEVWDQSTDGWNINPRRPLNERE

TrEMBL top hitse value%identityAlignment
A0A5A7TQA8 LINE-1 retrotransposable element ORF2 protein4.0e-19092.04Show/hide
Query:  MDYLSRLLSHLETKGAIKGVSFNNCCNISHLLFADDVLIFVEDNEKYLSNLQMALSLFEKASGLTFNHSKSTISPINISADRTDQIARFFGFQTKFLPFN
        MDYLSRLLSHLE+KGAIKGVSFNNCCNISHLLFADDVLIFVEDNE+YL+NLQMAL+LFEKASGLTFN+SKSTISPINISA RTDQIA FFGFQTKFLP N
Subjt:  MDYLSRLLSHLETKGAIKGVSFNNCCNISHLLFADDVLIFVEDNEKYLSNLQMALSLFEKASGLTFNHSKSTISPINISADRTDQIARFFGFQTKFLPFN

Query:  YLGVPLGGNPRSRSFWGQTIECIHKKLNGWKYSQISKRGRLTLLKASLSSLPTYQLSTFKAPVSVYKEIEKHWRDFLWGGSEDKQNAHLVNWRICTSPKE
        YLGVPLGGNPRSRSFW QTIECIHKKLNGWKYSQISK GRLTLLKASLSSLPTYQLSTFKAPVSVYKEIEKHWRDFLWGGSEDKQNAHL+NW ICTSPKE
Subjt:  YLGVPLGGNPRSRSFWGQTIECIHKKLNGWKYSQISKRGRLTLLKASLSSLPTYQLSTFKAPVSVYKEIEKHWRDFLWGGSEDKQNAHLVNWRICTSPKE

Query:  LGGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDIPIVGRNCSVKSPWNAIKKWKDWFESKISWIPNDGSSLSFWHSKWQNNIPLSH
        LGG+GISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDIP+VGRN S  SPWNAIKKWKDW+ESKISWIPNDGSSLSFWHSKW NNIPLS 
Subjt:  LGGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDIPIVGRNCSVKSPWNAIKKWKDWFESKISWIPNDGSSLSFWHSKWQNNIPLSH

Query:  QIPRLYALSNLQSATVKEVWDQSTDGWNINPRRPLNERE
        QIPRLYALSN+QSATVKE+WDQ +D WN+ PRRPLNERE
Subjt:  QIPRLYALSNLQSATVKEVWDQSTDGWNINPRRPLNERE

A0A5A7US62 LINE-1 retrotransposable element ORF2 protein4.0e-19092.04Show/hide
Query:  MDYLSRLLSHLETKGAIKGVSFNNCCNISHLLFADDVLIFVEDNEKYLSNLQMALSLFEKASGLTFNHSKSTISPINISADRTDQIARFFGFQTKFLPFN
        MDYLSRLLSHLE+KGAIKGVSFNNCCNISHLLFADDVLIFVEDNE+YL+NLQMAL+LFEKASGLTFN+SKSTISPINISA RTDQIA FFGFQTKFLP N
Subjt:  MDYLSRLLSHLETKGAIKGVSFNNCCNISHLLFADDVLIFVEDNEKYLSNLQMALSLFEKASGLTFNHSKSTISPINISADRTDQIARFFGFQTKFLPFN

Query:  YLGVPLGGNPRSRSFWGQTIECIHKKLNGWKYSQISKRGRLTLLKASLSSLPTYQLSTFKAPVSVYKEIEKHWRDFLWGGSEDKQNAHLVNWRICTSPKE
        YLGVPLGGNPRSRSFW QTIECIHKKLNGWKYSQISK GRLTLLKASLSSLPTYQLSTFKAPVSVYKEIEKHWRDFLWGGSEDKQNAHL+NW ICTSPKE
Subjt:  YLGVPLGGNPRSRSFWGQTIECIHKKLNGWKYSQISKRGRLTLLKASLSSLPTYQLSTFKAPVSVYKEIEKHWRDFLWGGSEDKQNAHLVNWRICTSPKE

Query:  LGGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDIPIVGRNCSVKSPWNAIKKWKDWFESKISWIPNDGSSLSFWHSKWQNNIPLSH
        LGGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDIP+VGRN S  SPWNAIKKWKDW+ESKISW+PNDGSSLSFWHSKW NNIPLS 
Subjt:  LGGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDIPIVGRNCSVKSPWNAIKKWKDWFESKISWIPNDGSSLSFWHSKWQNNIPLSH

Query:  QIPRLYALSNLQSATVKEVWDQSTDGWNINPRRPLNERE
        QIPRLYALSN+QSATVKE+WDQ +D WN+ PRRPLNERE
Subjt:  QIPRLYALSNLQSATVKEVWDQSTDGWNINPRRPLNERE

A0A5A7UTI6 LINE-1 retrotransposable element ORF2 protein4.2e-18790.86Show/hide
Query:  MDYLSRLLSHLETKGAIKGVSFNNCCNISHLLFADDVLIFVEDNEKYLSNLQMALSLFEKASGLTFNHSKSTISPINISADRTDQIARFFGFQTKFLPFN
        MDYLSRLLSHLE+KGAIKGVSFNN CNISHLLFADDVLIFVEDNE+YL+NLQMAL+LFEKASGLTFN+SKSTISPINISA RTDQIA FFGFQTKFLP N
Subjt:  MDYLSRLLSHLETKGAIKGVSFNNCCNISHLLFADDVLIFVEDNEKYLSNLQMALSLFEKASGLTFNHSKSTISPINISADRTDQIARFFGFQTKFLPFN

Query:  YLGVPLGGNPRSRSFWGQTIECIHKKLNGWKYSQISKRGRLTLLKASLSSLPTYQLSTFKAPVSVYKEIEKHWRDFLWGGSEDKQNAHLVNWRICTSPKE
        YLGVPLGGNPRSRSFW QTIECIHKKLNGWKYSQISK GRLTLLKASLSSLPTYQLSTFKAPVSVYKEIEKHWRDFLWGGSEDKQNAHL+NW ICTSPKE
Subjt:  YLGVPLGGNPRSRSFWGQTIECIHKKLNGWKYSQISKRGRLTLLKASLSSLPTYQLSTFKAPVSVYKEIEKHWRDFLWGGSEDKQNAHLVNWRICTSPKE

Query:  LGGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDIPIVGRNCSVKSPWNAIKKWKDWFESKISWIPNDGSSLSFWHSKWQNNIPLSH
        LGGLGISK+KDTNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDIP+VGRN S  SPWNAIKKWKDW+ESKISW+ NDGSSLSFWHSKW NNIPLS 
Subjt:  LGGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDIPIVGRNCSVKSPWNAIKKWKDWFESKISWIPNDGSSLSFWHSKWQNNIPLSH

Query:  QIPRLYALSNLQSATVKEVWDQSTDGWNINPRRPLNERE
        Q PRLYALSN+QSATVKE+WDQ +D WN+ PRRPLNERE
Subjt:  QIPRLYALSNLQSATVKEVWDQSTDGWNINPRRPLNERE

A0A5D3CA17 LINE-1 retrotransposable element ORF2 protein7.6e-18991.74Show/hide
Query:  MDYLSRLLSHLETKGAIKGVSFNNCCNISHLLFADDVLIFVEDNEKYLSNLQMALSLFEKASGLTFNHSKSTISPINISADRTDQIARFFGFQTKFLPFN
        MDYLSRLLSHLE+KGAIKGVSFNN CNISHLLFADDVLIFVEDNE+YL+NLQMAL+LFEKASGLTFN+SKSTISPINISA RTDQIA FFGFQTKFLP N
Subjt:  MDYLSRLLSHLETKGAIKGVSFNNCCNISHLLFADDVLIFVEDNEKYLSNLQMALSLFEKASGLTFNHSKSTISPINISADRTDQIARFFGFQTKFLPFN

Query:  YLGVPLGGNPRSRSFWGQTIECIHKKLNGWKYSQISKRGRLTLLKASLSSLPTYQLSTFKAPVSVYKEIEKHWRDFLWGGSEDKQNAHLVNWRICTSPKE
        YLGVPLGGNPRSRSFW QTIECIHKKLNGWKYSQISK GRLTLLKASLSSLPTYQLSTFKAPVSVYKEIEKHWRDFLWGGSEDKQNAHL+NW ICTSPKE
Subjt:  YLGVPLGGNPRSRSFWGQTIECIHKKLNGWKYSQISKRGRLTLLKASLSSLPTYQLSTFKAPVSVYKEIEKHWRDFLWGGSEDKQNAHLVNWRICTSPKE

Query:  LGGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDIPIVGRNCSVKSPWNAIKKWKDWFESKISWIPNDGSSLSFWHSKWQNNIPLSH
        LGGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDIP+VGRN S  SPWNAIKKWKDW+ESKISW+PNDGSSLSFWHSKW NNIPLS 
Subjt:  LGGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDIPIVGRNCSVKSPWNAIKKWKDWFESKISWIPNDGSSLSFWHSKWQNNIPLSH

Query:  QIPRLYALSNLQSATVKEVWDQSTDGWNINPRRPLNERE
        QIPRLYALSN+QSATVKE+WDQ +D WN+ PRRPLNERE
Subjt:  QIPRLYALSNLQSATVKEVWDQSTDGWNINPRRPLNERE

A0A5D3DZM5 LINE-1 retrotransposable element ORF2 protein7.6e-18991.74Show/hide
Query:  MDYLSRLLSHLETKGAIKGVSFNNCCNISHLLFADDVLIFVEDNEKYLSNLQMALSLFEKASGLTFNHSKSTISPINISADRTDQIARFFGFQTKFLPFN
        MDYLSRLLSHLE+KGAIKGVSFNN CNISHLLFADDVLIFVEDNE+YL+NLQMAL+LFEKASGLTFN+SKSTISPINISA RTDQIA FFGFQTKFLP N
Subjt:  MDYLSRLLSHLETKGAIKGVSFNNCCNISHLLFADDVLIFVEDNEKYLSNLQMALSLFEKASGLTFNHSKSTISPINISADRTDQIARFFGFQTKFLPFN

Query:  YLGVPLGGNPRSRSFWGQTIECIHKKLNGWKYSQISKRGRLTLLKASLSSLPTYQLSTFKAPVSVYKEIEKHWRDFLWGGSEDKQNAHLVNWRICTSPKE
        YLGVPLGGNPRSRSFW QTIECIHKKLNGWKYSQISK GRLTLLKASLSSLPTYQLSTFKAPVSVYKEIEKHWRDFLWGGSEDKQNAHL+NW ICTSPKE
Subjt:  YLGVPLGGNPRSRSFWGQTIECIHKKLNGWKYSQISKRGRLTLLKASLSSLPTYQLSTFKAPVSVYKEIEKHWRDFLWGGSEDKQNAHLVNWRICTSPKE

Query:  LGGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDIPIVGRNCSVKSPWNAIKKWKDWFESKISWIPNDGSSLSFWHSKWQNNIPLSH
        LGG+GISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDIP+VGRN S  SPWNAIKKWKDW+ESKISWIPNDGSSLSFWHSKW NNIPLS 
Subjt:  LGGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDIPIVGRNCSVKSPWNAIKKWKDWFESKISWIPNDGSSLSFWHSKWQNNIPLSH

Query:  QIPRLYALSNLQSATVKEVWDQSTDGWNINPRRPLNERE
        QIPRLYALSN+QSATVKE+WDQ +D WN+ PRRPLNERE
Subjt:  QIPRLYALSNLQSATVKEVWDQSTDGWNINPRRPLNERE

SwissProt top hitse value%identityAlignment
O00370 LINE-1 retrotransposable element ORF2 protein4.7e-1024.88Show/hide
Query:  LFADDVLIFVEDNEKYLSNLQMALSLFEKASGLTFNHSKSTISPINISADRTDQIARFFGFQTKFLPFNYLGVPLGGNPRS--RSFWGQTIECIHKKLNG
        LFADD+++++E+      NL   +S F K SG   N  KS     N +     QI     F        YLG+ L  + +   +  +   ++ I +  N 
Subjt:  LFADDVLIFVEDNEKYLSNLQMALSLFEKASGLTFNHSKSTISPINISADRTDQIARFFGFQTKFLPFNYLGVPLGGNPRS--RSFWGQTIECIHKKLNG

Query:  WKYSQISKRGRLTLLKASLSSLPTYQLST--FKAPVSVYKEIEKHWRDFLWGGSEDKQNAHLVNWRICTSPKELGGLGISKLKDTNQALLCK--WLWRYH
        WK    S  GR+ ++K ++     Y+ +    K P++ + E+EK    F+W      Q    +   I +   + GG+ +   K   +A + K  W W Y 
Subjt:  WKYSQISKRGRLTLLKASLSSLPTYQLST--FKAPVSVYKEIEKHWRDFLWGGSEDKQNAHLVNWRICTSPKELGGLGISKLKDTNQALLCK--WLWRYH

Query:  NESNSLWKK
        N     W +
Subjt:  NESNSLWKK

P0C2F6 Putative ribonuclease H protein At1g657502.2e-3132.47Show/hide
Query:  SRSFWGQTIECIHKKLNGWKYSQISKRGRLTLLKASLSSLPTYQLSTFKAPVSVYKEIEKHWRDFLWGGSEDKQNAHLVNWRICTSPKELGGLGISKLKD
        ++  +G+ +E +  +++GW+   +S  GRLTL KA LSS+P + +ST   P S+   +++  R FLWG + +K+  HLV W    SPK+ GGLG+   K 
Subjt:  SRSFWGQTIECIHKKLNGWKYSQISKRGRLTLLKASLSSLPTYQLSTFKAPVSVYKEIEKHWRDFLWGGSEDKQNAHLVNWRICTSPKELGGLGISKLKD

Query:  TNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDIPIVGRNCSVKSPWNAIK-KWKDWFESKISWIPNDGSSLSFWHSKWQNNIPLSHQIPRLYALSN
         N+AL+ K  WR   E NSLW   +  KY      D   +    S  S W +I    +D     + WIP DG  + FW  +W +  PL  ++      ++
Subjt:  TNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDIPIVGRNCSVKSPWNAIK-KWKDWFESKISWIPNDGSSLSFWHSKWQNNIPLSHQIPRLYALSN

Query:  LQSATVKEVWDQSTDGWN---INPRRPLNER
          +   K++W     GW+   I+P    N R
Subjt:  LQSATVKEVWDQSTDGWN---INPRRPLNER

P93295 Uncharacterized mitochondrial protein AtMg003101.3e-0725.69Show/hide
Query:  SLPTYQLSTFKAPVSVYKEIEKHWRDFLWGGSEDKQNAHLVNW-RICTSPKELGGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDI
        +LP Y +S F+    + K++     +F W   E+K+    V W ++C S ++ GGLG   L   NQALL K  +R  ++ ++L  + + ++Y  +     
Subjt:  SLPTYQLSTFKAPVSVYKEIEKHWRDFLWGGSEDKQNAHLVNW-RICTSPKELGGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDI

Query:  PIVGRNCSVKSPWNAIKKWKDWFESKISWIPNDGSSLSFWHSKW
          VG   S    W +I   ++     +     DG     W  +W
Subjt:  PIVGRNCSVKSPWNAIKKWKDWFESKISWIPNDGSSLSFWHSKW

Arabidopsis top hitse value%identityAlignment
AT4G29090.1 Ribonuclease H-like superfamily protein2.3e-1225.54Show/hide
Query:  SLPTYQLSTFKAPVSVYKEIEKHWRDFLWGGSEDKQNAHLVNWRICTSPKELGGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKY-TKNHQGDI
        +LPTY ++ F  P +V K+I     DF W   ++ +  H   W   +  K  GG+G   ++  N ALL K +WR  +   SL  K   ++Y  K+   + 
Subjt:  SLPTYQLSTFKAPVSVYKEIEKHWRDFLWGGSEDKQNAHLVNWRICTSPKELGGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKY-TKNHQGDI

Query:  PIVGRNCSVKSPWNAIKKWKDWFESKISWIPNDGSSLSFWHSKWQNNIPLS-----HQIPRLYALSNLQSATVKEVWDQSTDGW
        P+  R   V   W +I   ++        +  +G  +  W  KW ++ P S      ++P     S      V ++ D+S   W
Subjt:  PIVGRNCSVKSPWNAIKKWKDWFESKISWIPNDGSSLSFWHSKWQNNIPLS-----HQIPRLYALSNLQSATVKEVWDQSTDGW

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein9.1e-0925.69Show/hide
Query:  SLPTYQLSTFKAPVSVYKEIEKHWRDFLWGGSEDKQNAHLVNW-RICTSPKELGGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDI
        +LP Y +S F+    + K++     +F W   E+K+    V W ++C S ++ GGLG   L   NQALL K  +R  ++ ++L  + + ++Y  +     
Subjt:  SLPTYQLSTFKAPVSVYKEIEKHWRDFLWGGSEDKQNAHLVNW-RICTSPKELGGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDI

Query:  PIVGRNCSVKSPWNAIKKWKDWFESKISWIPNDGSSLSFWHSKW
          VG   S    W +I   ++     +     DG     W  +W
Subjt:  PIVGRNCSVKSPWNAIKKWKDWFESKISWIPNDGSSLSFWHSKW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTACTTAAGCAGATTGCTGTCCCACCTGGAAACAAAAGGAGCTATCAAAGGGGTCTCTTTCAACAACTGCTGCAACATATCTCACCTTCTATTTGCGGACGATGT
ACTCATCTTTGTCGAAGACAATGAAAAGTACTTAAGCAATTTACAGATGGCGCTCTCTCTCTTTGAGAAAGCTTCTGGGCTGACTTTCAACCATTCGAAGTCAACAATAA
GCCCCATAAACATATCTGCTGATAGAACGGATCAGATAGCTAGATTTTTCGGGTTTCAAACTAAATTCCTACCATTCAACTACCTAGGAGTTCCATTGGGAGGAAACCCA
AGATCCAGATCTTTTTGGGGACAAACAATCGAATGTATCCATAAAAAACTAAACGGATGGAAATACTCACAAATTTCCAAACGAGGAAGACTTACCCTTCTAAAAGCTTC
TCTCTCGAGCCTCCCCACCTATCAGCTTTCTACTTTCAAAGCTCCTGTCTCTGTTTACAAAGAAATTGAAAAACATTGGAGAGATTTCTTGTGGGGAGGAAGTGAGGACA
AACAAAATGCTCACCTGGTCAATTGGAGAATTTGTACCTCCCCTAAGGAGTTGGGAGGCCTGGGAATTAGCAAGCTAAAGGACACAAACCAAGCCCTCCTATGCAAATGG
CTATGGAGATACCACAATGAGTCAAATTCTCTTTGGAAAAAGTGTATAGATGCTAAATACACAAAAAACCATCAAGGCGACATACCAATAGTAGGTAGAAATTGTAGTGT
AAAATCTCCCTGGAATGCAATCAAAAAATGGAAAGACTGGTTTGAATCAAAAATCAGCTGGATTCCCAACGATGGCTCCTCCCTATCCTTTTGGCACAGCAAATGGCAAA
ACAATATTCCTCTCTCCCACCAAATTCCTAGACTCTATGCTCTCTCGAATCTACAATCAGCTACTGTAAAGGAAGTTTGGGACCAAAGTACCGATGGATGGAACATTAAC
CCAAGACGACCTTTAAATGAGAGGGAAAACCATATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATTACTTAAGCAGATTGCTGTCCCACCTGGAAACAAAAGGAGCTATCAAAGGGGTCTCTTTCAACAACTGCTGCAACATATCTCACCTTCTATTTGCGGACGATGT
ACTCATCTTTGTCGAAGACAATGAAAAGTACTTAAGCAATTTACAGATGGCGCTCTCTCTCTTTGAGAAAGCTTCTGGGCTGACTTTCAACCATTCGAAGTCAACAATAA
GCCCCATAAACATATCTGCTGATAGAACGGATCAGATAGCTAGATTTTTCGGGTTTCAAACTAAATTCCTACCATTCAACTACCTAGGAGTTCCATTGGGAGGAAACCCA
AGATCCAGATCTTTTTGGGGACAAACAATCGAATGTATCCATAAAAAACTAAACGGATGGAAATACTCACAAATTTCCAAACGAGGAAGACTTACCCTTCTAAAAGCTTC
TCTCTCGAGCCTCCCCACCTATCAGCTTTCTACTTTCAAAGCTCCTGTCTCTGTTTACAAAGAAATTGAAAAACATTGGAGAGATTTCTTGTGGGGAGGAAGTGAGGACA
AACAAAATGCTCACCTGGTCAATTGGAGAATTTGTACCTCCCCTAAGGAGTTGGGAGGCCTGGGAATTAGCAAGCTAAAGGACACAAACCAAGCCCTCCTATGCAAATGG
CTATGGAGATACCACAATGAGTCAAATTCTCTTTGGAAAAAGTGTATAGATGCTAAATACACAAAAAACCATCAAGGCGACATACCAATAGTAGGTAGAAATTGTAGTGT
AAAATCTCCCTGGAATGCAATCAAAAAATGGAAAGACTGGTTTGAATCAAAAATCAGCTGGATTCCCAACGATGGCTCCTCCCTATCCTTTTGGCACAGCAAATGGCAAA
ACAATATTCCTCTCTCCCACCAAATTCCTAGACTCTATGCTCTCTCGAATCTACAATCAGCTACTGTAAAGGAAGTTTGGGACCAAAGTACCGATGGATGGAACATTAAC
CCAAGACGACCTTTAAATGAGAGGGAAAACCATATTTGA
Protein sequenceShow/hide protein sequence
MDYLSRLLSHLETKGAIKGVSFNNCCNISHLLFADDVLIFVEDNEKYLSNLQMALSLFEKASGLTFNHSKSTISPINISADRTDQIARFFGFQTKFLPFNYLGVPLGGNP
RSRSFWGQTIECIHKKLNGWKYSQISKRGRLTLLKASLSSLPTYQLSTFKAPVSVYKEIEKHWRDFLWGGSEDKQNAHLVNWRICTSPKELGGLGISKLKDTNQALLCKW
LWRYHNESNSLWKKCIDAKYTKNHQGDIPIVGRNCSVKSPWNAIKKWKDWFESKISWIPNDGSSLSFWHSKWQNNIPLSHQIPRLYALSNLQSATVKEVWDQSTDGWNIN
PRRPLNERENHI