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IVF0001078 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0001078
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Genome locationchr09:3189628..3189846
RNA-Seq ExpressionIVF0001078
SyntenyIVF0001078
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032860.1 retrotransposon protein, putative, Ty3-gypsy subclass [Cucumis melo var. makuwa]4.15e-0460.47Show/hide
Query:  QLYIGIISKCVGRSYVDVGKDIVRNA-LSRRENGTTSTKITTD
         L +  I+K VGR YVDVGKD+VRNA  S   NGTTSTK+T +
Subjt:  QLYIGIISKCVGRSYVDVGKDIVRNA-LSRRENGTTSTKITTD
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGACGCAGCTTTACATCGGCATAATCTCGAAATGCGTCGGTAGAAGTTACGTTGACGTCGGAAAGGATATCGTGAGAAATGCCCTCTCCCGACGTGAGAACGGGAC
GACGTCTACAAAGATTACTACTGATGCACTCTTCACCGACATGGTCAATACGTCGGGAATGCGAAACTACGGATGCGTGTTAACAGCATTGCAAATACCTCACTGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGACGCAGCTTTACATCGGCATAATCTCGAAATGCGTCGGTAGAAGTTACGTTGACGTCGGAAAGGATATCGTGAGAAATGCCCTCTCCCGACGTGAGAACGGGAC
GACGTCTACAAAGATTACTACTGATGCACTCTTCACCGACATGGTCAATACGTCGGGAATGCGAAACTACGGATGCGTGTTAACAGCATTGCAAATACCTCACTGCTGA
Protein sequenceShow/hide protein sequence
MSTQLYIGIISKCVGRSYVDVGKDIVRNALSRRENGTTSTKITTDALFTDMVNTSGMRNYGCVLTALQIPHC