; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0001092 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0001092
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationchr10:7610427..7612770
RNA-Seq ExpressionIVF0001092
SyntenyIVF0001092
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily
IPR044646 - Pentatricopeptide repeat-containing protein EMB1417-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008464896.1 PREDICTED: pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 [Cucumis melo]1.69e-198100Show/hide
Query:  MLVLHGSSTGFDALVPKIDCIYYHNKCAFRPASVICVHNQAAQPHTSFTTPERRVVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGEL
        MLVLHGSSTGFDALVPKIDCIYYHNKCAFRPASVICVHNQAAQPHTSFTTPERRVVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGEL
Subjt:  MLVLHGSSTGFDALVPKIDCIYYHNKCAFRPASVICVHNQAAQPHTSFTTPERRVVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGEL

Query:  NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQD
        NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQD
Subjt:  NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQD

Query:  KIIEIFADMEELGVKPDEDTVRRIGRAFQKLGQEENRKMVYKRYSCQWKYIHFKGERVRVRKDGWDEDDQ
        KIIEIFADMEELGVKPDEDTVRRIGRAFQKLGQEENRKMVYKRYSCQWKYIHFKGERVRVRKDGWDEDDQ
Subjt:  KIIEIFADMEELGVKPDEDTVRRIGRAFQKLGQEENRKMVYKRYSCQWKYIHFKGERVRVRKDGWDEDDQ

XP_011654973.1 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 [Cucumis sativus]5.37e-18694.44Show/hide
Query:  MLVLHGSSTGFDALVPKIDCIYYHNKCAFRPASVICVHNQAAQPHTSFTTPERRVVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGEL
        MLV HG+STGFDAL+PKIDCIYYHNK  F P+SVICVHNQAAQP TSFTTPERRVVKKVGKE HHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGEL
Subjt:  MLVLHGSSTGFDALVPKIDCIYYHNKCAFRPASVICVHNQAAQPHTSFTTPERRVVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGEL

Query:  NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQD
        NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQD
Subjt:  NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQD

Query:  KIIEIFADMEELGVKPDEDTVRRIGRAFQKLGQEENRKMVYKRYSCQWKYIHFKGERVRVRKDGWDEDDQ
        KIIEIFADMEELGVKPDEDTVRR+  AFQKLGQE+NRKMVYKRYSCQWKYIHFKGERVRVR+DGWDED Q
Subjt:  KIIEIFADMEELGVKPDEDTVRRIGRAFQKLGQEENRKMVYKRYSCQWKYIHFKGERVRVRKDGWDEDDQ

XP_023541595.1 pentatricopeptide repeat-containing protein At4g18975, chloroplastic [Cucurbita pepo subsp. pepo]2.78e-17088.19Show/hide
Query:  MLVLHGSSTGFDALVPKIDCIYYHNKCAFRPASVICVHNQAAQPHTSFTTPERRVVKK-VGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE
        ML   GSSTGFDALVPK  CIY +NK AFR ASV CVH QAAQ  TS TT ERR+VKK VGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE
Subjt:  MLVLHGSSTGFDALVPKIDCIYYHNKCAFRPASVICVHNQAAQPHTSFTTPERRVVKK-VGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE

Query:  LNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQ
        LNKWIAWETEFPLIAA+KALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILH HTRSISKR+FSRMISLY+HHDLQ
Subjt:  LNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQ

Query:  DKIIEIFADMEELGVKPDEDTVRRIGRAFQKLGQEENRKMVYKRYSCQWKYIHFKGERVRVRKDGWDEDDQ
        DKIIEIFADMEELGV+PDEDTVRR+  AF+KLGQEEN K+VYKRY C+WKYIHFKGERVRVR+DGWDEDD+
Subjt:  DKIIEIFADMEELGVKPDEDTVRRIGRAFQKLGQEENRKMVYKRYSCQWKYIHFKGERVRVRKDGWDEDDQ

XP_031740922.1 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X2 [Cucumis sativus]6.28e-18293.33Show/hide
Query:  MLVLHGSSTGFDALVPKIDCIYYHNKCAFRPASVICVHNQAAQPHTSFTTPERRVVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGEL
        MLV HG+STGFDAL+PKIDCIYYHNK  F P+SVICVHNQAAQP TSFTTPERRVVKKVGKE HHLWKKRDSAGSGQKALNLV   SQCPNEKEAVYGEL
Subjt:  MLVLHGSSTGFDALVPKIDCIYYHNKCAFRPASVICVHNQAAQPHTSFTTPERRVVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGEL

Query:  NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQD
        NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQD
Subjt:  NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQD

Query:  KIIEIFADMEELGVKPDEDTVRRIGRAFQKLGQEENRKMVYKRYSCQWKYIHFKGERVRVRKDGWDEDDQ
        KIIEIFADMEELGVKPDEDTVRR+  AFQKLGQE+NRKMVYKRYSCQWKYIHFKGERVRVR+DGWDED Q
Subjt:  KIIEIFADMEELGVKPDEDTVRRIGRAFQKLGQEENRKMVYKRYSCQWKYIHFKGERVRVRKDGWDEDDQ

XP_038892676.1 pentatricopeptide repeat-containing protein At4g18975, chloroplastic [Benincasa hispida]3.37e-17389.96Show/hide
Query:  MLVLHGSSTGFDALVPKIDCIYYHNKCAFRPASVICVHNQAAQPHTSFTTPERRVVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGEL
        MLV HGSSTGFDALVPKIDCIY++NK  FR ASV CVH QA          ERR+VKKVGKE HHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGEL
Subjt:  MLVLHGSSTGFDALVPKIDCIYYHNKCAFRPASVICVHNQAAQPHTSFTTPERRVVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGEL

Query:  NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQD
        NKWIAWETEFPLIAAAKALRILRKRSQWK VIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKR+FSRMISLYEHHDLQD
Subjt:  NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQD

Query:  KIIEIFADMEELGVKPDEDTVRRIGRAFQKLGQEENRKMVYKRYSCQWKYIHFKGERVRVRKDGWDEDD
        KIIEIFADMEELGVKPDEDTVRR+GRAF KLGQEEN+KMVYKRY CQWKYIHFKGERVRVR+DGWDEDD
Subjt:  KIIEIFADMEELGVKPDEDTVRRIGRAFQKLGQEENRKMVYKRYSCQWKYIHFKGERVRVRKDGWDEDD

TrEMBL top hitse value%identityAlignment
A0A0A0KSA5 Uncharacterized protein1.2e-14494.44Show/hide
Query:  MLVLHGSSTGFDALVPKIDCIYYHNKCAFRPASVICVHNQAAQPHTSFTTPERRVVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGEL
        MLV HG+STGFDAL+PKIDCIYYHNK  F P+SVICVHNQAAQP TSFTTPERRVVKKVGKE HHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGEL
Subjt:  MLVLHGSSTGFDALVPKIDCIYYHNKCAFRPASVICVHNQAAQPHTSFTTPERRVVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGEL

Query:  NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQD
        NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQD
Subjt:  NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQD

Query:  KIIEIFADMEELGVKPDEDTVRRIGRAFQKLGQEENRKMVYKRYSCQWKYIHFKGERVRVRKDGWDEDDQ
        KIIEIFADMEELGVKPDEDTVRR+  AFQKLGQE+NRKMVYKRYSCQWKYIHFKGERVRVR+DGWDED Q
Subjt:  KIIEIFADMEELGVKPDEDTVRRIGRAFQKLGQEENRKMVYKRYSCQWKYIHFKGERVRVRKDGWDEDDQ

A0A1S3CP50 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X13.7e-154100Show/hide
Query:  MLVLHGSSTGFDALVPKIDCIYYHNKCAFRPASVICVHNQAAQPHTSFTTPERRVVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGEL
        MLVLHGSSTGFDALVPKIDCIYYHNKCAFRPASVICVHNQAAQPHTSFTTPERRVVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGEL
Subjt:  MLVLHGSSTGFDALVPKIDCIYYHNKCAFRPASVICVHNQAAQPHTSFTTPERRVVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGEL

Query:  NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQD
        NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQD
Subjt:  NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQD

Query:  KIIEIFADMEELGVKPDEDTVRRIGRAFQKLGQEENRKMVYKRYSCQWKYIHFKGERVRVRKDGWDEDDQ
        KIIEIFADMEELGVKPDEDTVRRIGRAFQKLGQEENRKMVYKRYSCQWKYIHFKGERVRVRKDGWDEDDQ
Subjt:  KIIEIFADMEELGVKPDEDTVRRIGRAFQKLGQEENRKMVYKRYSCQWKYIHFKGERVRVRKDGWDEDDQ

A0A5A7UD21 Pentatricopeptide repeat-containing protein3.7e-154100Show/hide
Query:  MLVLHGSSTGFDALVPKIDCIYYHNKCAFRPASVICVHNQAAQPHTSFTTPERRVVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGEL
        MLVLHGSSTGFDALVPKIDCIYYHNKCAFRPASVICVHNQAAQPHTSFTTPERRVVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGEL
Subjt:  MLVLHGSSTGFDALVPKIDCIYYHNKCAFRPASVICVHNQAAQPHTSFTTPERRVVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGEL

Query:  NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQD
        NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQD
Subjt:  NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQD

Query:  KIIEIFADMEELGVKPDEDTVRRIGRAFQKLGQEENRKMVYKRYSCQWKYIHFKGERVRVRKDGWDEDDQ
        KIIEIFADMEELGVKPDEDTVRRIGRAFQKLGQEENRKMVYKRYSCQWKYIHFKGERVRVRKDGWDEDDQ
Subjt:  KIIEIFADMEELGVKPDEDTVRRIGRAFQKLGQEENRKMVYKRYSCQWKYIHFKGERVRVRKDGWDEDDQ

A0A6J1CC95 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X11.2e-13186.67Show/hide
Query:  MLVLHGSSTGFDALVPKIDCIYYHNKCAFRPASVICVHNQAAQPHTSFTTPERRVVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGEL
        M V  G+S GFD LVPK DCI   NK  FR AS  C HNQA QP TS  T ERR+VKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYG L
Subjt:  MLVLHGSSTGFDALVPKIDCIYYHNKCAFRPASVICVHNQAAQPHTSFTTPERRVVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGEL

Query:  NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQD
        NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYD+LLLAFDMDKRVDEAESLWNMILHTHTRSISK++FSRMISLY+HHDLQD
Subjt:  NKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQD

Query:  KIIEIFADMEELGVKPDEDTVRRIGRAFQKLGQEENRKMVYKRYSCQWKYIHFKGERVRVRKDGWDEDDQ
        K+IEIFADMEELGVKPDEDTVRR+ RAFQKLGQEENRKMV+KRY C+WKYIHFKGERVRV++DGWDEDD+
Subjt:  KIIEIFADMEELGVKPDEDTVRRIGRAFQKLGQEENRKMVYKRYSCQWKYIHFKGERVRVRKDGWDEDDQ

A0A6J1FWG3 pentatricopeptide repeat-containing protein At4g18975, chloroplastic1.4e-13288.19Show/hide
Query:  MLVLHGSSTGFDALVPKIDCIYYHNKCAFRPASVICVHNQAAQPHTSFTTPERRVV-KKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE
        ML   GSSTGFDALVPK  CIY +NK AFR ASV CVH QAAQ  T  TT ERR+V KKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE
Subjt:  MLVLHGSSTGFDALVPKIDCIYYHNKCAFRPASVICVHNQAAQPHTSFTTPERRVV-KKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGE

Query:  LNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQ
        LNKWIAWETEFPLIAA+KALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILH HTRSISKR+FSRMISLY+HHDLQ
Subjt:  LNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQ

Query:  DKIIEIFADMEELGVKPDEDTVRRIGRAFQKLGQEENRKMVYKRYSCQWKYIHFKGERVRVRKDGWDEDDQ
        DKIIEIFADMEELGV+PDEDTVRR+  AF+KLGQEEN KMVYKRY C+WKYIHFKGERVRVR+DGWDEDD+
Subjt:  DKIIEIFADMEELGVKPDEDTVRRIGRAFQKLGQEENRKMVYKRYSCQWKYIHFKGERVRVRKDGWDEDDQ

SwissProt top hitse value%identityAlignment
Q2V3H0 Pentatricopeptide repeat-containing protein At4g18975, chloroplastic8.6e-9275.12Show/hide
Query:  TPERRVVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGT
        T   + +KKVGK+ HHLWKK DSAGSGQKALNLVR++S  PNEKEAVYG LNKW+AWE EFP+IAAAKAL+ILRKRSQW RVIQ+AKWMLSKGQGATMGT
Subjt:  TPERRVVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGT

Query:  YDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRIGRAFQKLGQEENRKMVYKRYSCQWK
        YD LLLAFDMD+R DEAESLWNMILHTHTRSI +R+F+RMI+LY HHDL DK+IE+FADMEEL V PDED+ RR+ RAF++L QEENRK++ +RY  ++K
Subjt:  YDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRIGRAFQKLGQEENRKMVYKRYSCQWK

Query:  YIHFKGERVRVRK
        YI+F GERVRV++
Subjt:  YIHFKGERVRVRK

Q8LG95 Pentatricopeptide repeat-containing protein At4g211905.5e-4646.19Show/hide
Query:  LWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDE
        +WK R   G+  KA  ++  +    N KE VYG L+ +IAWE EFPL+   KAL IL    +WK++IQV KWMLSKGQG TMGTY +LL A   D R+DE
Subjt:  LWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDE

Query:  AESLWNMILHTHTRSISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRIGRAFQKLGQEENRKMVYKRY-SCQWKYIHFKGERVRVR
        AE LWN +   H     ++ F++MIS+Y   D+  K+ E+FADMEELGVKP+   V  +G+ F KL  ++  + + K+Y   QW++ + KG RV+V+
Subjt:  AESLWNMILHTHTRSISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRIGRAFQKLGQEENRKMVYKRY-SCQWKYIHFKGERVRVR

Arabidopsis top hitse value%identityAlignment
AT4G18975.1 Pentatricopeptide repeat (PPR) superfamily protein6.1e-9375.12Show/hide
Query:  TPERRVVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGT
        T   + +KKVGK+ HHLWKK DSAGSGQKALNLVR++S  PNEKEAVYG LNKW+AWE EFP+IAAAKAL+ILRKRSQW RVIQ+AKWMLSKGQGATMGT
Subjt:  TPERRVVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGT

Query:  YDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRIGRAFQKLGQEENRKMVYKRYSCQWK
        YD LLLAFDMD+R DEAESLWNMILHTHTRSI +R+F+RMI+LY HHDL DK+IE+FADMEEL V PDED+ RR+ RAF++L QEENRK++ +RY  ++K
Subjt:  YDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRIGRAFQKLGQEENRKMVYKRYSCQWK

Query:  YIHFKGERVRVRK
        YI+F GERVRV++
Subjt:  YIHFKGERVRVRK

AT4G18975.2 Pentatricopeptide repeat (PPR) superfamily protein6.1e-9375.12Show/hide
Query:  TPERRVVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGT
        T   + +KKVGK+ HHLWKK DSAGSGQKALNLVR++S  PNEKEAVYG LNKW+AWE EFP+IAAAKAL+ILRKRSQW RVIQ+AKWMLSKGQGATMGT
Subjt:  TPERRVVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGT

Query:  YDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRIGRAFQKLGQEENRKMVYKRYSCQWK
        YD LLLAFDMD+R DEAESLWNMILHTHTRSI +R+F+RMI+LY HHDL DK+IE+FADMEEL V PDED+ RR+ RAF++L QEENRK++ +RY  ++K
Subjt:  YDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRIGRAFQKLGQEENRKMVYKRYSCQWK

Query:  YIHFKGERVRVRK
        YI+F GERVRV++
Subjt:  YIHFKGERVRVRK

AT4G18975.3 Pentatricopeptide repeat (PPR) superfamily protein6.1e-9375.12Show/hide
Query:  TPERRVVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGT
        T   + +KKVGK+ HHLWKK DSAGSGQKALNLVR++S  PNEKEAVYG LNKW+AWE EFP+IAAAKAL+ILRKRSQW RVIQ+AKWMLSKGQGATMGT
Subjt:  TPERRVVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGT

Query:  YDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRIGRAFQKLGQEENRKMVYKRYSCQWK
        YD LLLAFDMD+R DEAESLWNMILHTHTRSI +R+F+RMI+LY HHDL DK+IE+FADMEEL V PDED+ RR+ RAF++L QEENRK++ +RY  ++K
Subjt:  YDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRIGRAFQKLGQEENRKMVYKRYSCQWK

Query:  YIHFKGERVRVRK
        YI+F GERVRV++
Subjt:  YIHFKGERVRVRK

AT4G18975.4 Pentatricopeptide repeat (PPR) superfamily protein6.1e-9375.12Show/hide
Query:  TPERRVVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGT
        T   + +KKVGK+ HHLWKK DSAGSGQKALNLVR++S  PNEKEAVYG LNKW+AWE EFP+IAAAKAL+ILRKRSQW RVIQ+AKWMLSKGQGATMGT
Subjt:  TPERRVVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGT

Query:  YDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRIGRAFQKLGQEENRKMVYKRYSCQWK
        YD LLLAFDMD+R DEAESLWNMILHTHTRSI +R+F+RMI+LY HHDL DK+IE+FADMEEL V PDED+ RR+ RAF++L QEENRK++ +RY  ++K
Subjt:  YDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRIGRAFQKLGQEENRKMVYKRYSCQWK

Query:  YIHFKGERVRVRK
        YI+F GERVRV++
Subjt:  YIHFKGERVRVRK

AT4G21190.1 Pentatricopeptide repeat (PPR) superfamily protein3.9e-4746.19Show/hide
Query:  LWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDE
        +WK R   G+  KA  ++  +    N KE VYG L+ +IAWE EFPL+   KAL IL    +WK++IQV KWMLSKGQG TMGTY +LL A   D R+DE
Subjt:  LWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDE

Query:  AESLWNMILHTHTRSISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRIGRAFQKLGQEENRKMVYKRY-SCQWKYIHFKGERVRVR
        AE LWN +   H     ++ F++MIS+Y   D+  K+ E+FADMEELGVKP+   V  +G+ F KL  ++  + + K+Y   QW++ + KG RV+V+
Subjt:  AESLWNMILHTHTRSISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRIGRAFQKLGQEENRKMVYKRY-SCQWKYIHFKGERVRVR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGTTCTCCATGGAAGCTCAACTGGGTTCGATGCCCTCGTGCCAAAGATAGATTGCATTTACTATCACAACAAATGCGCATTTAGACCTGCCAGCGTCATTTGTGT
TCACAACCAAGCTGCACAGCCCCATACTAGTTTCACCACACCTGAGAGACGTGTCGTTAAGAAGGTTGGGAAGGAGGCACACCATTTATGGAAGAAAAGAGATTCTGCTG
GCTCTGGGCAAAAGGCTCTTAATCTTGTTAGAATTGTTTCCCAATGTCCTAATGAGAAAGAAGCTGTATATGGAGAATTGAATAAGTGGATAGCTTGGGAGACAGAGTTT
CCATTGATTGCAGCTGCTAAAGCTTTAAGAATACTGAGGAAGAGAAGTCAATGGAAGCGTGTCATTCAAGTGGCAAAGTGGATGTTAAGCAAGGGCCAAGGAGCCACAAT
GGGAACATACGACACCCTTCTACTGGCATTTGATATGGACAAGAGGGTGGACGAAGCCGAATCCTTATGGAACATGATATTACATACACATACACGTTCCATCTCTAAGC
GAGTATTTTCTAGGATGATCTCTCTGTACGAACATCATGACTTGCAAGATAAGATTATCGAGATATTTGCAGACATGGAAGAATTGGGTGTAAAACCAGATGAAGATACC
GTAAGAAGAATCGGCCGTGCATTTCAAAAACTAGGTCAAGAAGAAAACCGGAAAATGGTCTATAAAAGATACAGCTGCCAATGGAAATACATACACTTCAAGGGTGAGAG
GGTTAGAGTGAGAAAAGATGGATGGGATGAAGATGACCAATGA
mRNA sequenceShow/hide mRNA sequence
TCCGCTGTTGTATCCCACGACCCACCCACTCCAACGCAATCATCTTTCTCAGTTCACGATTAGATTTGCCTGCGCCGCTGGATACCTTCCCCTGACCATAGCTCAAGCTT
CTTACTCCACGACGACCAACCGATGTTTGTTTCATAAACCGAATGCTAAGTTTGATTAAACTCGATACCCATTACATAAAGCGCTGAAATTTCAATTTTTCTGATGTTGG
TTCTCCATGGAAGCTCAACTGGGTTCGATGCCCTCGTGCCAAAGATAGATTGCATTTACTATCACAACAAATGCGCATTTAGACCTGCCAGCGTCATTTGTGTTCACAAC
CAAGCTGCACAGCCCCATACTAGTTTCACCACACCTGAGAGACGTGTCGTTAAGAAGGTTGGGAAGGAGGCACACCATTTATGGAAGAAAAGAGATTCTGCTGGCTCTGG
GCAAAAGGCTCTTAATCTTGTTAGAATTGTTTCCCAATGTCCTAATGAGAAAGAAGCTGTATATGGAGAATTGAATAAGTGGATAGCTTGGGAGACAGAGTTTCCATTGA
TTGCAGCTGCTAAAGCTTTAAGAATACTGAGGAAGAGAAGTCAATGGAAGCGTGTCATTCAAGTGGCAAAGTGGATGTTAAGCAAGGGCCAAGGAGCCACAATGGGAACA
TACGACACCCTTCTACTGGCATTTGATATGGACAAGAGGGTGGACGAAGCCGAATCCTTATGGAACATGATATTACATACACATACACGTTCCATCTCTAAGCGAGTATT
TTCTAGGATGATCTCTCTGTACGAACATCATGACTTGCAAGATAAGATTATCGAGATATTTGCAGACATGGAAGAATTGGGTGTAAAACCAGATGAAGATACCGTAAGAA
GAATCGGCCGTGCATTTCAAAAACTAGGTCAAGAAGAAAACCGGAAAATGGTCTATAAAAGATACAGCTGCCAATGGAAATACATACACTTCAAGGGTGAGAGGGTTAGA
GTGAGAAAAGATGGATGGGATGAAGATGACCAATGATGGATACATTAACATGAACAAGTTCATAAGGTATCTATCTACTGATCCCCATTAATTATATGCGCTGAAGCACG
CTGAAACAGAGATTTGCAGTCTATTTTGTCTTCTCTGCTCTGAATATTTAGAACAACTTCTAACAGAG
Protein sequenceShow/hide protein sequence
MLVLHGSSTGFDALVPKIDCIYYHNKCAFRPASVICVHNQAAQPHTSFTTPERRVVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEF
PLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDT
VRRIGRAFQKLGQEENRKMVYKRYSCQWKYIHFKGERVRVRKDGWDEDDQ