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IVF0001103 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0001103
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptioncullin 1
Genome locationchr06:19101703..19102270
RNA-Seq ExpressionIVF0001103
SyntenyIVF0001103
Gene Ontology termsNA
InterPro domainsIPR036317 - Cullin homology domain superfamily
IPR045093 - Cullin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ANC90259.1 cullin 1 [Vitis pseudoreticulata]1.89e-1672.73Show/hide
Query:  EAFEVFCNKGVARSSSIEFLVTFCDNILKKSEREKLSDKKIKETLEKH-------TDKDLFAEFYR
        EAFEVFCNKGVA SSS E LVTFCDNILKK   EKLSD+ I+ETLEK        +DKDLFAEFYR
Subjt:  EAFEVFCNKGVARSSSIEFLVTFCDNILKKSEREKLSDKKIKETLEKH-------TDKDLFAEFYR
GAU10667.1 hypothetical protein TSUD_426200, partial [Trifolium subterraneum]8.15e-1868.18Show/hide
Query:  EAFEVFCNKGVARSSSIEFLVTFCDNILKKSEREKLSDKKIKETLEKH-------TDKDLFAEFYR
        EAFE+FCNKGVA SSS E L TFCDNILKK   EKLSD+ I++TLEK        +DKDLFAEFYR
Subjt:  EAFEVFCNKGVARSSSIEFLVTFCDNILKKSEREKLSDKKIKETLEKH-------TDKDLFAEFYR
KAF5930280.1 hypothetical protein HYC85_031153 [Camellia sinensis]1.41e-1669.7Show/hide
Query:  EAFEVFCNKGVARSSSIEFLVTFCDNILKKSEREKLSDKKIKETLEKH-------TDKDLFAEFYR
        EAFEVFCNKGV  SSS E L TFCDNILKK   EKLSD+ I+ETLEK        +DKDLFAEFYR
Subjt:  EAFEVFCNKGVARSSSIEFLVTFCDNILKKSEREKLSDKKIKETLEKH-------TDKDLFAEFYR
KAG8483254.1 hypothetical protein CXB51_022272 [Gossypium anomalum]8.63e-1761.73Show/hide
Query:  EKKKVIGDVDKDRRYEAFEVFCNKGVARSSSIEFLVTFCDNILKKSEREKLSDKKIKETLEKH-------TDKDLFAEFYR
        +KK V+G + +    EAFEVFCNKGV  SSS E L TFCDNILKK   EKLSD+ I+ETLEK        +DKDLFAEFYR
Subjt:  EKKKVIGDVDKDRRYEAFEVFCNKGVARSSSIEFLVTFCDNILKKSEREKLSDKKIKETLEKH-------TDKDLFAEFYR
QHO02016.1 Cullin [Arachis hypogaea]4.09e-1765Show/hide
Query:  KKVIGDVDKDRRY---EAFEVFCNKGVARSSSIEFLVTFCDNILKKSEREKLSDKKIKETLEKH-----TDKDLFAEFYR
        +KVI   DK   Y   EAFEVFCNKGVA SSS E L TFCDNILKK   EKLSD+ I+ETLEK      +DKDLFA+FYR
Subjt:  KKVIGDVDKDRRY---EAFEVFCNKGVARSSSIEFLVTFCDNILKKSEREKLSDKKIKETLEKH-----TDKDLFAEFYR
TrEMBL top hitse value%identityAlignment
A0A172MAB9 Cullin 15.6e-1472.73Show/hide
Query:  EAFEVFCNKGVARSSSIEFLVTFCDNILKKSEREKLSDKKIKETLEK-------HTDKDLFAEFYR
        EAFEVFCNKGVA SSS E LVTFCDNILKK   EKLSD+ I+ETLEK        +DKDLFAEFYR
Subjt:  EAFEVFCNKGVARSSSIEFLVTFCDNILKKSEREKLSDKKIKETLEK-------HTDKDLFAEFYR
A0A1S6YFU7 Cullin 11.2e-1371.21Show/hide
Query:  EAFEVFCNKGVARSSSIEFLVTFCDNILKKSEREKLSDKKIKETLEK-------HTDKDLFAEFYR
        EAFEVFCNKGVA SSS E L TFCDNILKK   EKLSD+ I+ETLEK        +DKDLFAEFYR
Subjt:  EAFEVFCNKGVARSSSIEFLVTFCDNILKKSEREKLSDKKIKETLEK-------HTDKDLFAEFYR
A0A1U7WKX4 cullin-1 isoform X11.6e-1371.21Show/hide
Query:  EAFEVFCNKGVARSSSIEFLVTFCDNILKKSEREKLSDKKIKETLEK-------HTDKDLFAEFYR
        EAFEVFCNKGVA SSS E L TFCDNILKK   EKLSD+ I+ETLEK        +DKDLFAEFYR
Subjt:  EAFEVFCNKGVARSSSIEFLVTFCDNILKKSEREKLSDKKIKETLEK-------HTDKDLFAEFYR
A0A2I0B578 Cullin-11.2e-1371.21Show/hide
Query:  EAFEVFCNKGVARSSSIEFLVTFCDNILKKSEREKLSDKKIKETLEK-------HTDKDLFAEFYR
        EAFEVFCNKGVA SSS E L TFCDNILKK   EKLSD+ I+ETLEK        +DKDLFAEFYR
Subjt:  EAFEVFCNKGVARSSSIEFLVTFCDNILKKSEREKLSDKKIKETLEK-------HTDKDLFAEFYR
A0A6J1KEU4 cullin-1-like1.6e-1371.21Show/hide
Query:  EAFEVFCNKGVARSSSIEFLVTFCDNILKKSEREKLSDKKIKETLEK-------HTDKDLFAEFYR
        EAFEVFCNKGVA SSS E L TFCDNILKK   EKLSD+ I+ETLEK        +DKDLFAEFYR
Subjt:  EAFEVFCNKGVARSSSIEFLVTFCDNILKKSEREKLSDKKIKETLEK-------HTDKDLFAEFYR
SwissProt top hitse value%identityAlignment
P0CH31 Putative cullin-like protein 13.2e-1161.19Show/hide
Query:  EAFEVFCNKGVARSSSIEFLVTFCDNILK-KSEREKLSDKKIKETLEK-------HTDKDLFAEFYR
        EAFEVFCNK VA +SS E L T+CDNILK +   EKLSD+  + TLEK        +DKDLFAEFYR
Subjt:  EAFEVFCNKGVARSSSIEFLVTFCDNILK-KSEREKLSDKKIKETLEK-------HTDKDLFAEFYR
Q5ZC88 Cullin-12.2e-1568.18Show/hide
Query:  EAFEVFCNKGVARSSSIEFLVTFCDNILKKSEREKLSDKKIKETLEK-------HTDKDLFAEFYR
        EAFEVFCNKGV+ SSS E L TFCDNILKK   EKLSD+ I++TLEK        +DKDLFAEFYR
Subjt:  EAFEVFCNKGVARSSSIEFLVTFCDNILKKSEREKLSDKKIKETLEK-------HTDKDLFAEFYR
Q94AH6 Cullin-11.1e-1466.67Show/hide
Query:  EAFEVFCNKGVARSSSIEFLVTFCDNILKKSEREKLSDKKIKETLEK-------HTDKDLFAEFYR
        EAFE+FCNK VA SSS E L TFCDNILKK   EKLSD+ I++TLEK        +DKDLFAEFYR
Subjt:  EAFEVFCNKGVARSSSIEFLVTFCDNILKKSEREKLSDKKIKETLEK-------HTDKDLFAEFYR
Q9SRZ0 Cullin-23.0e-0956.72Show/hide
Query:  EAFEVFCNKGVARSSSIEFLVTFCDNILKKSER-EKLSDKKIKETLEK-------HTDKDLFAEFYR
        EAFEVFCNK VA  SS E L T+CDNILK     EKL ++ ++ TLEK        +DKDLFAEF+R
Subjt:  EAFEVFCNKGVARSSSIEFLVTFCDNILKKSER-EKLSDKKIKETLEK-------HTDKDLFAEFYR
Arabidopsis top hitse value%identityAlignment
AT1G43140.1 Cullin family protein2.3e-1261.19Show/hide
Query:  EAFEVFCNKGVARSSSIEFLVTFCDNILK-KSEREKLSDKKIKETLEK-------HTDKDLFAEFYR
        EAFEVFCNK VA +SS E L T+CDNILK +   EKLSD+  + TLEK        +DKDLFAEFYR
Subjt:  EAFEVFCNKGVARSSSIEFLVTFCDNILK-KSEREKLSDKKIKETLEK-------HTDKDLFAEFYR
AT4G02570.1 cullin 17.7e-1666.67Show/hide
Query:  EAFEVFCNKGVARSSSIEFLVTFCDNILKKSEREKLSDKKIKETLEK-------HTDKDLFAEFYR
        EAFE+FCNK VA SSS E L TFCDNILKK   EKLSD+ I++TLEK        +DKDLFAEFYR
Subjt:  EAFEVFCNKGVARSSSIEFLVTFCDNILKKSEREKLSDKKIKETLEK-------HTDKDLFAEFYR
AT4G02570.2 cullin 17.7e-1666.67Show/hide
Query:  EAFEVFCNKGVARSSSIEFLVTFCDNILKKSEREKLSDKKIKETLEK-------HTDKDLFAEFYR
        EAFE+FCNK VA SSS E L TFCDNILKK   EKLSD+ I++TLEK        +DKDLFAEFYR
Subjt:  EAFEVFCNKGVARSSSIEFLVTFCDNILKKSEREKLSDKKIKETLEK-------HTDKDLFAEFYR
AT4G02570.3 cullin 17.7e-1666.67Show/hide
Query:  EAFEVFCNKGVARSSSIEFLVTFCDNILKKSEREKLSDKKIKETLEK-------HTDKDLFAEFYR
        EAFE+FCNK VA SSS E L TFCDNILKK   EKLSD+ I++TLEK        +DKDLFAEFYR
Subjt:  EAFEVFCNKGVARSSSIEFLVTFCDNILKKSEREKLSDKKIKETLEK-------HTDKDLFAEFYR
AT4G02570.4 cullin 17.7e-1666.67Show/hide
Query:  EAFEVFCNKGVARSSSIEFLVTFCDNILKKSEREKLSDKKIKETLEK-------HTDKDLFAEFYR
        EAFE+FCNK VA SSS E L TFCDNILKK   EKLSD+ I++TLEK        +DKDLFAEFYR
Subjt:  EAFEVFCNKGVARSSSIEFLVTFCDNILKKSEREKLSDKKIKETLEK-------HTDKDLFAEFYR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGTGGTGTTGTTTGTTGTGTGCATCCCTCTTCCGCTTGTGGATGAGAAAAAGAAAGTCATTGGAGATGTTGACAAGGATCGAAGGTATGAAGCTTTTGAAGTTTT
TTGCAATAAGGGTGTTGCTAGAAGTTCTAGTATAGAATTTCTTGTTACCTTTTGTGATAACATCCTTAAGAAAAGTGAGAGAGAGAAGTTGAGTGATAAAAAAATCAAGG
AGACACTTGAGAAGCATACAGACAAAGATCTATTTGCTGAATTCTATAGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATGTGGTGTTGTTTGTTGTGTGCATCCCTCTTCCGCTTGTGGATGAGAAAAAGAAAGTCATTGGAGATGTTGACAAGGATCGAAGGTATGAAGCTTTTGAAGTTTT
TTGCAATAAGGGTGTTGCTAGAAGTTCTAGTATAGAATTTCTTGTTACCTTTTGTGATAACATCCTTAAGAAAAGTGAGAGAGAGAAGTTGAGTGATAAAAAAATCAAGG
AGACACTTGAGAAGCATACAGACAAAGATCTATTTGCTGAATTCTATAGGTGA
Protein sequenceShow/hide protein sequence
MNVVLFVVCIPLPLVDEKKKVIGDVDKDRRYEAFEVFCNKGVARSSSIEFLVTFCDNILKKSEREKLSDKKIKETLEKHTDKDLFAEFYR