; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0001108 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0001108
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPMD domain-containing protein
Genome locationchr06:15833460..15834280
RNA-Seq ExpressionIVF0001108
SyntenyIVF0001108
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN34118.1 hypothetical protein [Cucumis melo subsp. melo]8.74e-7062.39Show/hide
Query:  MTPNLEEEVKEHKDESDSSKSDRHWKRPLKKAK--------------------------------EVGTSKTPVNKLAEQSLHPFALLKEIRRGKMTVGG
        M PNLEEEVKEHKDESDSSKSDRHWKRPLKKAK                                EVGTSKTPVNK AEQSL P AL +EIRRGKMTVGG
Subjt:  MTPNLEEEVKEHKDESDSSKSDRHWKRPLKKAK--------------------------------EVGTSKTPVNKLAEQSLHPFALLKEIRRGKMTVGG

Query:  KDLESPSSKEGACPKAPLQKVSSTHAPLKFSELSLGASNKQTTRNPKPSQ------------------------------------LRLEIATVLLGIEK
        KDLES SSKEG CPKA L KVSSTHAPLKFSEL LGASNKQT RNP+PSQ                                    LR EIATVL GIEK
Subjt:  KDLESPSSKEGACPKAPLQKVSSTHAPLKFSELSLGASNKQTTRNPKPSQ------------------------------------LRLEIATVLLGIEK

Query:  IHADGLTPLKEYLNSYLKRVDNFNDV
        IHADGLT L+EYLNSYLKRVDNFNDV
Subjt:  IHADGLTPLKEYLNSYLKRVDNFNDV

KAA0025448.1 hypothetical protein E6C27_scaffold417G00440 [Cucumis melo var. makuwa]1.94e-7065.88Show/hide
Query:  MTPNLEEEVKEHKDESDSSKSDRHWKRPLKKAK----------------------------------------------------EVGTSKTPVNKLAEQ
        M  NLEEEVKEHKDESDSSKSDRHWKRPLKKAK                                                    EVGTSKT +NKLAEQ
Subjt:  MTPNLEEEVKEHKDESDSSKSDRHWKRPLKKAK----------------------------------------------------EVGTSKTPVNKLAEQ

Query:  SLHPFALLKEIRRGKMTVGGKDLESPSSKEGACPKAPLQKVSSTHAPLKFSELSLGASNKQTTRNPKPSQLRLEIATVLLGIEKIHADGLTPL-KEYLNS
        SL P ALLKEIR+GKMTVGGKDLESPSSKEG CPKA LQKVSSTHAPLKFSEL LGASNKQTTRNP+PSQ   EIATVL  IEKIHADGLT L +EYLNS
Subjt:  SLHPFALLKEIRRGKMTVGGKDLESPSSKEGACPKAPLQKVSSTHAPLKFSELSLGASNKQTTRNPKPSQLRLEIATVLLGIEKIHADGLTPL-KEYLNS

Query:  YLKRVDNFNDV
        YLKRV+NFNDV
Subjt:  YLKRVDNFNDV

KAA0031751.1 hypothetical protein E6C27_scaffold506G00140 [Cucumis melo var. makuwa]2.14e-6856.91Show/hide
Query:  MTPNLEEEVKEHKDESDSSKSDRHWKRPLKKAK----------------------------------------------------EVGTSKTPVNKLAEQ
        M PNLEEEVKEHKDESDSSKSDRHWKRPLKKAK                                                    EVGTS+TPVNK  EQ
Subjt:  MTPNLEEEVKEHKDESDSSKSDRHWKRPLKKAK----------------------------------------------------EVGTSKTPVNKLAEQ

Query:  SLHPFALLKEIRRGKMTVGGKDLESPSSKEGACPKAPLQKVSSTHAPLKFSELSLGASNKQTTRNPKPSQ------------------------------
        SL P ALL+EIRRGKMTVGGKDLESPSSKEGACPKA LQKVSS HAPL FSEL LG SNKQT RNP+PSQ                              
Subjt:  SLHPFALLKEIRRGKMTVGGKDLESPSSKEGACPKAPLQKVSSTHAPLKFSELSLGASNKQTTRNPKPSQ------------------------------

Query:  ------LRLEIATVLLGIEKIHADGLTPLKEYLNSYLKRVDNFNDV
              LR EIATVL GIEKIHADGLT L+EYLNSYLKRVDNFNDV
Subjt:  ------LRLEIATVLLGIEKIHADGLTPLKEYLNSYLKRVDNFNDV

KAA0053466.1 hypothetical protein E6C27_scaffold190G00140 [Cucumis melo var. makuwa]4.15e-6863.81Show/hide
Query:  MTPNLEEEVKEHKDESDSSKSDRHWKRPLKKAK----------------------------------------------------EVGTSKTPVNKLAEQ
        M PNLE+EV EH  ESDS+KSDRHWKRPLKKAK                                                    EVGTS+TPVNK AEQ
Subjt:  MTPNLEEEVKEHKDESDSSKSDRHWKRPLKKAK----------------------------------------------------EVGTSKTPVNKLAEQ

Query:  SLHPFALLKEIRRGKMTVGGKDLESPSSKEGACPKAPLQKVSSTHAPLKFSELSLGASNKQTTRNPKPSQLRLEIATVLLGIEKIHADGLTPLKEYLNSY
        SL P  LL+EIRRGKMTVGGKDLESPSSKEGACPKA LQKVSS HAPLKFSEL LG SNKQT RNP+PSQLR EIATVL GIEKIHADGL  L+EYLNSY
Subjt:  SLHPFALLKEIRRGKMTVGGKDLESPSSKEGACPKAPLQKVSSTHAPLKFSELSLGASNKQTTRNPKPSQLRLEIATVLLGIEKIHADGLTPLKEYLNSY

Query:  LKRVDNFNDV
        LKRV+NFNDV
Subjt:  LKRVDNFNDV

KAA0060401.1 hypothetical protein E6C27_scaffold22G002130 [Cucumis melo var. makuwa]6.34e-8764.23Show/hide
Query:  MTPNLEEEVKEHKDESDSSKSDRHWKRPLKKAK----------------------------------------------------EVGTSKTPVNKLAEQ
        MTPNLEEEVKEHKDESDSSKSDRHWKRPLKKAK                                                    EVGTSKTPVNKLAEQ
Subjt:  MTPNLEEEVKEHKDESDSSKSDRHWKRPLKKAK----------------------------------------------------EVGTSKTPVNKLAEQ

Query:  SLHPFALLKEIRRGKMTVGGKDLESPSSKEGACPKAPLQKVSSTHAPLKFSELSLGASNKQTTRNPKPSQ------------------------------
        SLHPFALLKEIRRGKMTVGGKDLESPSSKEGACPKAPLQKVSSTHAPLKFSELSLGASNKQTTRNPKPSQ                              
Subjt:  SLHPFALLKEIRRGKMTVGGKDLESPSSKEGACPKAPLQKVSSTHAPLKFSELSLGASNKQTTRNPKPSQ------------------------------

Query:  ------LRLEIATVLLGIEKIHADGLTPLKEYLNSYLKRVDNFNDV
              LRLEIATVLLGIEKIHADGLTPLKEYLNSYLKRVDNFNDV
Subjt:  ------LRLEIATVLLGIEKIHADGLTPLKEYLNSYLKRVDNFNDV

TrEMBL top hitse value%identityAlignment
A0A5A7UGW6 PMD domain-containing protein1.4e-5763.81Show/hide
Query:  MTPNLEEEVKEHKDESDSSKSDRHWKRPLKKAK----------------------------------------------------EVGTSKTPVNKLAEQ
        M PNLE+EV EH  ESDS+KSDRHWKRPLKKAK                                                    EVGTS+TPVNK AEQ
Subjt:  MTPNLEEEVKEHKDESDSSKSDRHWKRPLKKAK----------------------------------------------------EVGTSKTPVNKLAEQ

Query:  SLHPFALLKEIRRGKMTVGGKDLESPSSKEGACPKAPLQKVSSTHAPLKFSELSLGASNKQTTRNPKPSQLRLEIATVLLGIEKIHADGLTPLKEYLNSY
        SL P  LL+EIRRGKMTVGGKDLESPSSKEGACPKA LQKVSS HAPLKFSEL LG SNKQT RNP+PSQLR EIATVL GIEKIHADGL  L+EYLNSY
Subjt:  SLHPFALLKEIRRGKMTVGGKDLESPSSKEGACPKAPLQKVSSTHAPLKFSELSLGASNKQTTRNPKPSQLRLEIATVLLGIEKIHADGLTPLKEYLNSY

Query:  LKRVDNFNDV
        LKRV+NFNDV
Subjt:  LKRVDNFNDV

A0A5D3C0F3 Uncharacterized protein8.4e-5865.88Show/hide
Query:  MTPNLEEEVKEHKDESDSSKSDRHWKRPLKKAK----------------------------------------------------EVGTSKTPVNKLAEQ
        M  NLEEEVKEHKDESDSSKSDRHWKRPLKKAK                                                    EVGTSKT +NKLAEQ
Subjt:  MTPNLEEEVKEHKDESDSSKSDRHWKRPLKKAK----------------------------------------------------EVGTSKTPVNKLAEQ

Query:  SLHPFALLKEIRRGKMTVGGKDLESPSSKEGACPKAPLQKVSSTHAPLKFSELSLGASNKQTTRNPKPSQLRLEIATVLLGIEKIHADGLTP-LKEYLNS
        SL P ALLKEIR+GKMTVGGKDLESPSSKEG CPKA LQKVSSTHAPLKFSEL LGASNKQTTRNP+PSQ   EIATVL  IEKIHADGLT  L+EYLNS
Subjt:  SLHPFALLKEIRRGKMTVGGKDLESPSSKEGACPKAPLQKVSSTHAPLKFSELSLGASNKQTTRNPKPSQLRLEIATVLLGIEKIHADGLTP-LKEYLNS

Query:  YLKRVDNFNDV
        YLKRV+NFNDV
Subjt:  YLKRVDNFNDV

A0A5D3C3D7 PMD domain-containing protein4.2e-5761.5Show/hide
Query:  MTPNLEEEVKEHKDESDSSKSDRHWKRPLKKAK--------------------------------EVGTSKTPVNKLAEQSLHPFALLKEIRRGKMTVGG
        M PNLEEEVKEHKDESDSSKSDRHWKRPLKKAK                                EVGTSKTPVNK AEQSL P AL +EIRRGKMTVGG
Subjt:  MTPNLEEEVKEHKDESDSSKSDRHWKRPLKKAK--------------------------------EVGTSKTPVNKLAEQSLHPFALLKEIRRGKMTVGG

Query:  KDLESPSSKEGACPKAPLQKVSSTHAPLKFSELSLGASNKQTTRNPKPSQ------------------------------------LRLEIATVLLGIEK
        KDLES SSKEG CPKA L KVSSTHAPLKFSEL LG SNKQT RN +PSQ                                    LR EIATVL GIEK
Subjt:  KDLESPSSKEGACPKAPLQKVSSTHAPLKFSELSLGASNKQTTRNPKPSQ------------------------------------LRLEIATVLLGIEK

Query:  IHADGLTPLKEYLNSYLKRVDNFNDV
        IHADGLT L+EYLNSYLKRVDNFNDV
Subjt:  IHADGLTPLKEYLNSYLKRVDNFNDV

A0A5D3DEN0 Uncharacterized protein4.0e-6864.23Show/hide
Query:  MTPNLEEEVKEHKDESDSSKSDRHWKRPLKKAK----------------------------------------------------EVGTSKTPVNKLAEQ
        MTPNLEEEVKEHKDESDSSKSDRHWKRPLKKAK                                                    EVGTSKTPVNKLAEQ
Subjt:  MTPNLEEEVKEHKDESDSSKSDRHWKRPLKKAK----------------------------------------------------EVGTSKTPVNKLAEQ

Query:  SLHPFALLKEIRRGKMTVGGKDLESPSSKEGACPKAPLQKVSSTHAPLKFSELSLGASNKQTTRNPKPSQ------------------------------
        SLHPFALLKEIRRGKMTVGGKDLESPSSKEGACPKAPLQKVSSTHAPLKFSELSLGASNKQTTRNPKPSQ                              
Subjt:  SLHPFALLKEIRRGKMTVGGKDLESPSSKEGACPKAPLQKVSSTHAPLKFSELSLGASNKQTTRNPKPSQ------------------------------

Query:  ------LRLEIATVLLGIEKIHADGLTPLKEYLNSYLKRVDNFNDV
              LRLEIATVLLGIEKIHADGLTPLKEYLNSYLKRVDNFNDV
Subjt:  ------LRLEIATVLLGIEKIHADGLTPLKEYLNSYLKRVDNFNDV

E5GCB9 PMD domain-containing protein8.4e-5862.39Show/hide
Query:  MTPNLEEEVKEHKDESDSSKSDRHWKRPLKKAK--------------------------------EVGTSKTPVNKLAEQSLHPFALLKEIRRGKMTVGG
        M PNLEEEVKEHKDESDSSKSDRHWKRPLKKAK                                EVGTSKTPVNK AEQSL P AL +EIRRGKMTVGG
Subjt:  MTPNLEEEVKEHKDESDSSKSDRHWKRPLKKAK--------------------------------EVGTSKTPVNKLAEQSLHPFALLKEIRRGKMTVGG

Query:  KDLESPSSKEGACPKAPLQKVSSTHAPLKFSELSLGASNKQTTRNPKPSQ------------------------------------LRLEIATVLLGIEK
        KDLES SSKEG CPKA L KVSSTHAPLKFSEL LGASNKQT RNP+PSQ                                    LR EIATVL GIEK
Subjt:  KDLESPSSKEGACPKAPLQKVSSTHAPLKFSELSLGASNKQTTRNPKPSQ------------------------------------LRLEIATVLLGIEK

Query:  IHADGLTPLKEYLNSYLKRVDNFNDV
        IHADGLT L+EYLNSYLKRVDNFNDV
Subjt:  IHADGLTPLKEYLNSYLKRVDNFNDV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCCTAATCTTGAGGAGGAGGTAAAAGAGCATAAAGATGAGAGCGATAGCAGCAAAAGTGATCGTCATTGGAAGAGACCTTTGAAGAAAGCGAAGGAAGTTGGTAC
CTCGAAAACTCCCGTCAATAAACTGGCTGAACAATCCTTACACCCATTTGCTCTTCTCAAGGAGATTCGTCGAGGCAAGATGACAGTGGGGGGAAAAGACCTTGAGAGCC
CTTCATCGAAAGAAGGTGCCTGTCCTAAAGCACCCTTACAAAAAGTTAGCTCGACACATGCTCCCCTTAAGTTTTCTGAATTGTCATTAGGCGCTTCTAATAAACAGACT
ACGAGAAATCCTAAACCTTCTCAACTTAGGCTAGAAATAGCGACGGTTCTCTTGGGGATCGAGAAGATCCATGCGGATGGCCTGACTCCTCTTAAAGAGTATCTAAATAG
TTACCTTAAGAGGGTAGACAATTTTAACGATGTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGACTCCTAATCTTGAGGAGGAGGTAAAAGAGCATAAAGATGAGAGCGATAGCAGCAAAAGTGATCGTCATTGGAAGAGACCTTTGAAGAAAGCGAAGGAAGTTGGTAC
CTCGAAAACTCCCGTCAATAAACTGGCTGAACAATCCTTACACCCATTTGCTCTTCTCAAGGAGATTCGTCGAGGCAAGATGACAGTGGGGGGAAAAGACCTTGAGAGCC
CTTCATCGAAAGAAGGTGCCTGTCCTAAAGCACCCTTACAAAAAGTTAGCTCGACACATGCTCCCCTTAAGTTTTCTGAATTGTCATTAGGCGCTTCTAATAAACAGACT
ACGAGAAATCCTAAACCTTCTCAACTTAGGCTAGAAATAGCGACGGTTCTCTTGGGGATCGAGAAGATCCATGCGGATGGCCTGACTCCTCTTAAAGAGTATCTAAATAG
TTACCTTAAGAGGGTAGACAATTTTAACGATGTGTAA
Protein sequenceShow/hide protein sequence
MTPNLEEEVKEHKDESDSSKSDRHWKRPLKKAKEVGTSKTPVNKLAEQSLHPFALLKEIRRGKMTVGGKDLESPSSKEGACPKAPLQKVSSTHAPLKFSELSLGASNKQT
TRNPKPSQLRLEIATVLLGIEKIHADGLTPLKEYLNSYLKRVDNFNDV