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IVF0001109 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0001109
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPathogenesis-related protein PR-4-like
Genome locationchr05:24678535..24679234
RNA-Seq ExpressionIVF0001109
SyntenyIVF0001109
Gene Ontology termsGO:0042742 - defense response to bacterium (biological process)
GO:0050832 - defense response to fungus (biological process)
GO:0090501 - RNA phosphodiester bond hydrolysis (biological process)
GO:0004540 - ribonuclease activity (molecular function)
InterPro domainsIPR001153 - Barwin domain
IPR018226 - Barwin, conserved site
IPR036908 - RlpA-like domain superfamily
IPR044301 - Pathogenesis-related protein-4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063600.1 pathogenesis-related protein PR-4-like [Cucumis melo var. makuwa]1.86e-89100Show/hide
Query:  MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANKPLEWRSQYGWTAFCGPIGPHGQDSCGLCLLVTNVQTGVQETVRIVDQCSNGGLDLDVGVF
        MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANKPLEWRSQYGWTAFCGPIGPHGQDSCGLCLLVTNVQTGVQETVRIVDQCSNGGLDLDVGVF
Subjt:  MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANKPLEWRSQYGWTAFCGPIGPHGQDSCGLCLLVTNVQTGVQETVRIVDQCSNGGLDLDVGVF

Query:  QSLDTDGNGNANGFLTVNYDFVNC
        QSLDTDGNGNANGFLTVNYDFVNC
Subjt:  QSLDTDGNGNANGFLTVNYDFVNC

KAE8651558.1 hypothetical protein Csa_019464 [Cucumis sativus]4.81e-8393.55Show/hide
Query:  MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANKPLEWRSQYGWTAFCGPIGPHGQDSCGLCLLVTNVQTGVQETVRIVDQCSNGGLDLDVGVF
        MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDAN+PLEWRSQYGWTAFCGP+GP GQ SCGLCLLVTNVQTG Q+TVRIVDQCSNGGLDLDVGVF
Subjt:  MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANKPLEWRSQYGWTAFCGPIGPHGQDSCGLCLLVTNVQTGVQETVRIVDQCSNGGLDLDVGVF

Query:  QSLDTDGNGNANGFLTVNYDFVNC
        QSLDTDGNG ANGFLT+NYDFVNC
Subjt:  QSLDTDGNGNANGFLTVNYDFVNC

XP_004139240.1 pathogenesis-related protein PR-4 [Cucumis sativus]6.72e-8393.55Show/hide
Query:  MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANKPLEWRSQYGWTAFCGPIGPHGQDSCGLCLLVTNVQTGVQETVRIVDQCSNGGLDLDVGVF
        MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDAN+PLEWRSQYGWTAFCGP+GP GQ SCGLCLLVTNVQTG Q+TVRIVDQCSNGGLDLDVGVF
Subjt:  MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANKPLEWRSQYGWTAFCGPIGPHGQDSCGLCLLVTNVQTGVQETVRIVDQCSNGGLDLDVGVF

Query:  QSLDTDGNGNANGFLTVNYDFVNC
        QSLDTDGNG ANGFLT+NYDFVNC
Subjt:  QSLDTDGNGNANGFLTVNYDFVNC

XP_022143020.1 pathogenesis-related protein PR-4-like [Momordica charantia]4.16e-8289.52Show/hide
Query:  MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANKPLEWRSQYGWTAFCGPIGPHGQDSCGLCLLVTNVQTGVQETVRIVDQCSNGGLDLDVGVF
        +S+ QSGSNVRAT+NLYNAPQINWDLNAVSAFC+TWDAN+PLEWRSQYGWTAFCGP+GPHGQDSCG CLLVTN +TG Q+TVRIVDQCSNGGLDLDVGVF
Subjt:  MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANKPLEWRSQYGWTAFCGPIGPHGQDSCGLCLLVTNVQTGVQETVRIVDQCSNGGLDLDVGVF

Query:  QSLDTDGNGNANGFLTVNYDFVNC
        QSLDT+GNGNANGFLTVNYDFVNC
Subjt:  QSLDTDGNGNANGFLTVNYDFVNC

XP_023545388.1 pathogenesis-related protein PR-4-like [Cucurbita pepo subsp. pepo]4.06e-8087.1Show/hide
Query:  MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANKPLEWRSQYGWTAFCGPIGPHGQDSCGLCLLVTNVQTGVQETVRIVDQCSNGGLDLDVGVF
        +SKAQS SNVRATFN YNAP+INWDLNAVSAFCSTWDA++PLEWRSQYGWTAFCGP+GP G+DSCGLCLLVTN +T  Q+TVRIVDQC+NGGLDLDVGVF
Subjt:  MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANKPLEWRSQYGWTAFCGPIGPHGQDSCGLCLLVTNVQTGVQETVRIVDQCSNGGLDLDVGVF

Query:  QSLDTDGNGNANGFLTVNYDFVNC
        QSLDTDGNGNANGFLT+NYDFVNC
Subjt:  QSLDTDGNGNANGFLTVNYDFVNC

TrEMBL top hitse value%identityAlignment
A0A0A0LG74 Barwin domain-containing protein1.1e-6393.55Show/hide
Query:  MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANKPLEWRSQYGWTAFCGPIGPHGQDSCGLCLLVTNVQTGVQETVRIVDQCSNGGLDLDVGVF
        MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDAN+PLEWRSQYGWTAFCGP+GP GQ SCGLCLLVTNVQTG Q+TVRIVDQCSNGGLDLDVGVF
Subjt:  MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANKPLEWRSQYGWTAFCGPIGPHGQDSCGLCLLVTNVQTGVQETVRIVDQCSNGGLDLDVGVF

Query:  QSLDTDGNGNANGFLTVNYDFVNC
        QSLDTDGNG ANGFLT+NYDFVNC
Subjt:  QSLDTDGNGNANGFLTVNYDFVNC

A0A5D3D4F5 Pathogenesis-related protein PR-4-like1.1e-68100Show/hide
Query:  MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANKPLEWRSQYGWTAFCGPIGPHGQDSCGLCLLVTNVQTGVQETVRIVDQCSNGGLDLDVGVF
        MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANKPLEWRSQYGWTAFCGPIGPHGQDSCGLCLLVTNVQTGVQETVRIVDQCSNGGLDLDVGVF
Subjt:  MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANKPLEWRSQYGWTAFCGPIGPHGQDSCGLCLLVTNVQTGVQETVRIVDQCSNGGLDLDVGVF

Query:  QSLDTDGNGNANGFLTVNYDFVNC
        QSLDTDGNGNANGFLTVNYDFVNC
Subjt:  QSLDTDGNGNANGFLTVNYDFVNC

A0A6J1CMK0 pathogenesis-related protein PR-4-like4.0e-6389.52Show/hide
Query:  MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANKPLEWRSQYGWTAFCGPIGPHGQDSCGLCLLVTNVQTGVQETVRIVDQCSNGGLDLDVGVF
        +S+ QSGSNVRAT+NLYNAPQINWDLNAVSAFC+TWDAN+PLEWRSQYGWTAFCGP+GPHGQDSCG CLLVTN +TG Q+TVRIVDQCSNGGLDLDVGVF
Subjt:  MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANKPLEWRSQYGWTAFCGPIGPHGQDSCGLCLLVTNVQTGVQETVRIVDQCSNGGLDLDVGVF

Query:  QSLDTDGNGNANGFLTVNYDFVNC
        QSLDT+GNGNANGFLTVNYDFVNC
Subjt:  QSLDTDGNGNANGFLTVNYDFVNC

A0A6J1G2Y5 pathogenesis-related protein PR-4-like2.9e-6187.9Show/hide
Query:  MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANKPLEWRSQYGWTAFCGPIGPHGQDSCGLCLLVTNVQTGVQETVRIVDQCSNGGLDLDVGVF
        +SKAQS SNVRATFNLYNAP+INWDLNAVSAFCSTWDA++PLEWRSQYGWTAFCGP+GP G+DSCGLCLLVTN +TG Q+ VRIVDQC+NGGLDLDVGVF
Subjt:  MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANKPLEWRSQYGWTAFCGPIGPHGQDSCGLCLLVTNVQTGVQETVRIVDQCSNGGLDLDVGVF

Query:  QSLDTDGNGNANGFLTVNYDFVNC
        QSLDTDGNGNANGFLTV+YDFVNC
Subjt:  QSLDTDGNGNANGFLTVNYDFVNC

A0A6J1KG47 pathogenesis-related protein PR-4-like2.9e-6187.9Show/hide
Query:  MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANKPLEWRSQYGWTAFCGPIGPHGQDSCGLCLLVTNVQTGVQETVRIVDQCSNGGLDLDVGVF
        +SKAQS SNVRATFNLYNAP+INWDLNAVSAFCSTWDA++PLEWRSQYGWTAFCGP+GP GQDSCGLCLLVTN +TG Q+TVRIVDQC+NGGLDLDVGVF
Subjt:  MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANKPLEWRSQYGWTAFCGPIGPHGQDSCGLCLLVTNVQTGVQETVRIVDQCSNGGLDLDVGVF

Query:  QSLDTDGNGNANGFLTVNYDFVNC
        QSLDTDGNGNANGFL V+YDFV C
Subjt:  QSLDTDGNGNANGFLTVNYDFVNC

SwissProt top hitse value%identityAlignment
P02877 Pro-hevein1.7e-4770.59Show/hide
Query:  SGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANKPLEWRSQYGWTAFCGPIGPHGQDSCGLCLLVTNVQTGVQETVRIVDQCSNGGLDLDVGVFQSLDT
        S SNV AT++LYN+    WDLNA SA+CSTWDANKP  WRS+YGWTAFCGP+G HGQ SCG CL VTN  TG + TVRIVDQCSNGGLDLDV VF+ LDT
Subjt:  SGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANKPLEWRSQYGWTAFCGPIGPHGQDSCGLCLLVTNVQTGVQETVRIVDQCSNGGLDLDVGVFQSLDT

Query:  DGNGNANGFLTVNYDFVNC
        DG G   G +TVNY FV+C
Subjt:  DGNGNANGFLTVNYDFVNC

P09761 Wound-induced protein WIN11.7e-5072.27Show/hide
Query:  SGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANKPLEWRSQYGWTAFCGPIGPHGQDSCGLCLLVTNVQTGVQETVRIVDQCSNGGLDLDVGVFQSLDT
        S  NVRAT+++YN   + WDLNAVSA+CSTWDANKPL WR +YGWTAFCGP+GP G+DSCG CL VTN +TG Q TVRIVDQCSNGGLDLDV VF+ +DT
Subjt:  SGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANKPLEWRSQYGWTAFCGPIGPHGQDSCGLCLLVTNVQTGVQETVRIVDQCSNGGLDLDVGVFQSLDT

Query:  DGNGNANGFLTVNYDFVNC
        DGNGN  G L VNY FV+C
Subjt:  DGNGNANGFLTVNYDFVNC

P09762 Wound-induced protein WIN22.9e-5072.27Show/hide
Query:  SGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANKPLEWRSQYGWTAFCGPIGPHGQDSCGLCLLVTNVQTGVQETVRIVDQCSNGGLDLDVGVFQSLDT
        S  NVRAT+++YN   + WDLNAVSA+CSTWDANKP  WRS+YGWTAFCGP+GP G+DSCG CL VTN +TG Q TVRIVDQCSNGGLDLD+ VFQ +DT
Subjt:  SGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANKPLEWRSQYGWTAFCGPIGPHGQDSCGLCLLVTNVQTGVQETVRIVDQCSNGGLDLDVGVFQSLDT

Query:  DGNGNANGFLTVNYDFVNC
        DG GN  G L VNY FVNC
Subjt:  DGNGNANGFLTVNYDFVNC

P29062 Pathogenesis-related protein PR-4A6.4e-5071.77Show/hide
Query:  MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANKPLEWRSQYGWTAFCGPIGPHGQDSCGLCLLVTNVQTGVQETVRIVDQCSNGGLDLDVGVF
        M+ AQS +NVR+T++LYN   INWDL A SAFC+TWDA+KPL WR +YGWTAFCGP GP GQDSCG CL VTN  TG Q TVRIVDQCSNGGLDLDV VF
Subjt:  MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANKPLEWRSQYGWTAFCGPIGPHGQDSCGLCLLVTNVQTGVQETVRIVDQCSNGGLDLDVGVF

Query:  QSLDTDGNGNANGFLTVNYDFVNC
          LDT+G G   G LTVNY+FVNC
Subjt:  QSLDTDGNGNANGFLTVNYDFVNC

P29063 Pathogenesis-related protein PR-4B3.2e-4970.97Show/hide
Query:  MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANKPLEWRSQYGWTAFCGPIGPHGQDSCGLCLLVTNVQTGVQETVRIVDQCSNGGLDLDVGVF
        M+ AQS +NVR+T++LYN   INWDL A SAFC+TWDA+KPL WR +YGWTAFCGP GP GQDSCG CL VTN  TG Q TVRIVDQCSNGGLDLDV VF
Subjt:  MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANKPLEWRSQYGWTAFCGPIGPHGQDSCGLCLLVTNVQTGVQETVRIVDQCSNGGLDLDVGVF

Query:  QSLDTDGNGNANGFLTVNYDFVNC
          LDT+G G   G L VNY+FVNC
Subjt:  QSLDTDGNGNANGFLTVNYDFVNC

Arabidopsis top hitse value%identityAlignment
AT3G04720.1 pathogenesis-related 43.7e-4566.67Show/hide
Query:  QSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANKPLEWRSQYGWTAFCGPIGPHGQDSCGLCLLVTNVQTGVQETVRIVDQCSNGGLDLDVGVFQSLD
        +S SNVRAT++ YN  Q NWDL AVSA+CSTWDA+KP  WRS+YGWTAFCGP GP GQ SCG CL V N +T    TVRIVDQCSNGGLDLDV +F  +D
Subjt:  QSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANKPLEWRSQYGWTAFCGPIGPHGQDSCGLCLLVTNVQTGVQETVRIVDQCSNGGLDLDVGVFQSLD

Query:  TDGNGNANGFLTVNYDFVNC
        TDG G   G L V+Y FV+C
Subjt:  TDGNGNANGFLTVNYDFVNC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCAAAGCTCAAAGTGGGAGTAACGTTAGAGCAACATTTAACTTATACAATGCTCCACAAATCAATTGGGATTTGAATGCTGTGAGTGCATTTTGTTCAACTTGGGA
TGCAAATAAACCTTTGGAATGGCGTAGCCAATATGGATGGACTGCCTTTTGTGGCCCTATTGGACCTCATGGCCAAGACTCTTGTGGCCTATGTTTATTAGTGACTAATG
TTCAAACAGGAGTTCAAGAAACAGTGAGAATTGTAGATCAATGTAGTAATGGAGGGTTAGATTTGGACGTTGGAGTGTTTCAAAGTCTCGACACCGATGGAAATGGCAAT
GCTAATGGCTTTCTCACAGTGAACTATGATTTTGTGAATTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCAAAGCTCAAAGTGGGAGTAACGTTAGAGCAACATTTAACTTATACAATGCTCCACAAATCAATTGGGATTTGAATGCTGTGAGTGCATTTTGTTCAACTTGGGA
TGCAAATAAACCTTTGGAATGGCGTAGCCAATATGGATGGACTGCCTTTTGTGGCCCTATTGGACCTCATGGCCAAGACTCTTGTGGCCTATGTTTATTAGTGACTAATG
TTCAAACAGGAGTTCAAGAAACAGTGAGAATTGTAGATCAATGTAGTAATGGAGGGTTAGATTTGGACGTTGGAGTGTTTCAAAGTCTCGACACCGATGGAAATGGCAAT
GCTAATGGCTTTCTCACAGTGAACTATGATTTTGTGAATTGTTGA
Protein sequenceShow/hide protein sequence
MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANKPLEWRSQYGWTAFCGPIGPHGQDSCGLCLLVTNVQTGVQETVRIVDQCSNGGLDLDVGVFQSLDTDGNGN
ANGFLTVNYDFVNC