; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0001134 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0001134
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionglycine-rich protein
Genome locationchr06:24990220..24992932
RNA-Seq ExpressionIVF0001134
SyntenyIVF0001134
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0008270 - zinc ion binding (molecular function)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055986.1 GMP synthase [Cucumis melo var. makuwa]5.48e-6898.2Show/hide
Query:  MSNSVIKASSSSFCFPSIESYILAKNYSLDFLKSVFHMRPRPYCELSDCPAELLHPPEDCNVNSTLPFTLQICRVEDLTVEGTITGSVIHFHWVRDIFVY
        MSNSVIKASSSSFCFPSIESYILAKNYSLDFLKSVFHMRPR YCELSDCPAELLHPPEDCNVNSTLPFTLQICRVEDLTVEG ITGSVIHFHWVRDIFVY
Subjt:  MSNSVIKASSSSFCFPSIESYILAKNYSLDFLKSVFHMRPRPYCELSDCPAELLHPPEDCNVNSTLPFTLQICRVEDLTVEGTITGSVIHFHWVRDIFVY

Query:  LSGAISASGLG
        LSGAISASGLG
Subjt:  LSGAISASGLG

KAA0061509.1 uncharacterized protein E6C27_scaffold41G00700 [Cucumis melo var. makuwa]2.96e-4098.63Show/hide
Query:  RPRPYCELSDCPAELLHPPEDCNVNSTLPFTLQICRVEDLTVEGTITGSVIHFHWVRDIFVYLSGAISASGLG
        RPR YCELSDCPAELLHPPEDCNVNSTLPFTLQICRVEDLTVEGTITGSVIHFHWVRDIFVYLSGAISASGLG
Subjt:  RPRPYCELSDCPAELLHPPEDCNVNSTLPFTLQICRVEDLTVEGTITGSVIHFHWVRDIFVYLSGAISASGLG

KAA0061742.1 uncharacterized protein E6C27_scaffold212G001170 [Cucumis melo var. makuwa]9.18e-4095.89Show/hide
Query:  RPRPYCELSDCPAELLHPPEDCNVNSTLPFTLQICRVEDLTVEGTITGSVIHFHWVRDIFVYLSGAISASGLG
        RPR YCELSDCPAELLHP EDCNVNSTLPFTLQICRVEDLTVEGTITGSVIHFHWVRDIFVYLS AISASGLG
Subjt:  RPRPYCELSDCPAELLHPPEDCNVNSTLPFTLQICRVEDLTVEGTITGSVIHFHWVRDIFVYLSGAISASGLG

TYK05710.1 uncharacterized protein E5676_scaffold98G001920 [Cucumis melo var. makuwa]1.97e-4398.63Show/hide
Query:  RPRPYCELSDCPAELLHPPEDCNVNSTLPFTLQICRVEDLTVEGTITGSVIHFHWVRDIFVYLSGAISASGLG
        RPR YCELSDCPAELLHPPEDCNVNSTLPFTLQICRVEDLTVEGTITGSVIHFHWVRDIFVYLSGAISASGLG
Subjt:  RPRPYCELSDCPAELLHPPEDCNVNSTLPFTLQICRVEDLTVEGTITGSVIHFHWVRDIFVYLSGAISASGLG

TYK10764.1 uncharacterized protein E5676_scaffold332G00770 [Cucumis melo var. makuwa]2.96e-4098.63Show/hide
Query:  RPRPYCELSDCPAELLHPPEDCNVNSTLPFTLQICRVEDLTVEGTITGSVIHFHWVRDIFVYLSGAISASGLG
        RPR YCELSDCPAELLHPPEDCNVNSTLPFTLQICRVEDLTVEGTITGSVIHFHWVRDIFVYLSGAISASGLG
Subjt:  RPRPYCELSDCPAELLHPPEDCNVNSTLPFTLQICRVEDLTVEGTITGSVIHFHWVRDIFVYLSGAISASGLG

TrEMBL top hitse value%identityAlignment
A0A0A0LIP4 Uncharacterized protein7.1e-3497.26Show/hide
Query:  RPRPYCELSDCPAELLHPPEDCNVNSTLPFTLQICRVEDLTVEGTITGSVIHFHWVRDIFVYLSGAISASGLG
        RPR YCELSDCPAELLHPPEDCNVNS+LPFTLQICRVEDLTVEGTITGSVIHFHWVRDIFVYLSGAISASGLG
Subjt:  RPRPYCELSDCPAELLHPPEDCNVNSTLPFTLQICRVEDLTVEGTITGSVIHFHWVRDIFVYLSGAISASGLG

A0A5A7UNW5 GMP synthase2.5e-5598.2Show/hide
Query:  MSNSVIKASSSSFCFPSIESYILAKNYSLDFLKSVFHMRPRPYCELSDCPAELLHPPEDCNVNSTLPFTLQICRVEDLTVEGTITGSVIHFHWVRDIFVY
        MSNSVIKASSSSFCFPSIESYILAKNYSLDFLKSVFHMRPR YCELSDCPAELLHPPEDCNVNSTLPFTLQICRVEDLTVEG ITGSVIHFHWVRDIFVY
Subjt:  MSNSVIKASSSSFCFPSIESYILAKNYSLDFLKSVFHMRPRPYCELSDCPAELLHPPEDCNVNSTLPFTLQICRVEDLTVEGTITGSVIHFHWVRDIFVY

Query:  LSGAISASGLG
        LSGAISASGLG
Subjt:  LSGAISASGLG

A0A5A7V766 Uncharacterized protein2.5e-3498.63Show/hide
Query:  RPRPYCELSDCPAELLHPPEDCNVNSTLPFTLQICRVEDLTVEGTITGSVIHFHWVRDIFVYLSGAISASGLG
        RPR YCELSDCPAELLHPPEDCNVNSTLPFTLQICRVEDLTVEGTITGSVIHFHWVRDIFVYLSGAISASGLG
Subjt:  RPRPYCELSDCPAELLHPPEDCNVNSTLPFTLQICRVEDLTVEGTITGSVIHFHWVRDIFVYLSGAISASGLG

A0A5D3C2Z4 Uncharacterized protein2.5e-3498.63Show/hide
Query:  RPRPYCELSDCPAELLHPPEDCNVNSTLPFTLQICRVEDLTVEGTITGSVIHFHWVRDIFVYLSGAISASGLG
        RPR YCELSDCPAELLHPPEDCNVNSTLPFTLQICRVEDLTVEGTITGSVIHFHWVRDIFVYLSGAISASGLG
Subjt:  RPRPYCELSDCPAELLHPPEDCNVNSTLPFTLQICRVEDLTVEGTITGSVIHFHWVRDIFVYLSGAISASGLG

A0A5D3CHT8 Uncharacterized protein2.5e-3498.63Show/hide
Query:  RPRPYCELSDCPAELLHPPEDCNVNSTLPFTLQICRVEDLTVEGTITGSVIHFHWVRDIFVYLSGAISASGLG
        RPR YCELSDCPAELLHPPEDCNVNSTLPFTLQICRVEDLTVEGTITGSVIHFHWVRDIFVYLSGAISASGLG
Subjt:  RPRPYCELSDCPAELLHPPEDCNVNSTLPFTLQICRVEDLTVEGTITGSVIHFHWVRDIFVYLSGAISASGLG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G32920.1 glycine-rich protein9.2e-2668.92Show/hide
Query:  MRPRPYCELSDCPAELLHPPEDCNVNSTLPFTLQICRVEDLTVEGTITGSVIHFHWVRDIFVYLSGAISASGLG
        + P+ YC+  DCP ELLHPPEDCNVNS+LPFTLQICRVED+TVEG I GSVI FH  R + V  SG ISA G+G
Subjt:  MRPRPYCELSDCPAELLHPPEDCNVNSTLPFTLQICRVEDLTVEGTITGSVIHFHWVRDIFVYLSGAISASGLG

AT4G32920.2 glycine-rich protein9.2e-2668.92Show/hide
Query:  MRPRPYCELSDCPAELLHPPEDCNVNSTLPFTLQICRVEDLTVEGTITGSVIHFHWVRDIFVYLSGAISASGLG
        + P+ YC+  DCP ELLHPPEDCNVNS+LPFTLQICRVED+TVEG I GSVI FH  R + V  SG ISA G+G
Subjt:  MRPRPYCELSDCPAELLHPPEDCNVNSTLPFTLQICRVEDLTVEGTITGSVIHFHWVRDIFVYLSGAISASGLG

AT4G32920.3 glycine-rich protein9.2e-2668.92Show/hide
Query:  MRPRPYCELSDCPAELLHPPEDCNVNSTLPFTLQICRVEDLTVEGTITGSVIHFHWVRDIFVYLSGAISASGLG
        + P+ YC+  DCP ELLHPPEDCNVNS+LPFTLQICRVED+TVEG I GSVI FH  R + V  SG ISA G+G
Subjt:  MRPRPYCELSDCPAELLHPPEDCNVNSTLPFTLQICRVEDLTVEGTITGSVIHFHWVRDIFVYLSGAISASGLG

AT5G11700.1 LOCATED IN: vacuole7.3e-2365.28Show/hide
Query:  PRPYCELSDCPAELLHPPEDCNVNSTLPFTLQICRVEDLTVEGTITGSVIHFHWVRDIFVYLSGAISASGLG
        P+ YCE  DCP ELL+PPEDCNVN++L FTLQICRVED+ VEG I GSV+HFH  + + +  SG ISASG+G
Subjt:  PRPYCELSDCPAELLHPPEDCNVNSTLPFTLQICRVEDLTVEGTITGSVIHFHWVRDIFVYLSGAISASGLG

AT5G11700.2 BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT4G32920.3)7.3e-2365.28Show/hide
Query:  PRPYCELSDCPAELLHPPEDCNVNSTLPFTLQICRVEDLTVEGTITGSVIHFHWVRDIFVYLSGAISASGLG
        P+ YCE  DCP ELL+PPEDCNVN++L FTLQICRVED+ VEG I GSV+HFH  + + +  SG ISASG+G
Subjt:  PRPYCELSDCPAELLHPPEDCNVNSTLPFTLQICRVEDLTVEGTITGSVIHFHWVRDIFVYLSGAISASGLG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCAATTCTGTTATTAAGGCAAGTAGCAGCTCCTTTTGTTTCCCATCTATCGAGAGCTATATTTTAGCCAAAAATTATTCTTTGGACTTTCTCAAGAGTGTGTTTCA
TATGAGACCACGACCCTACTGTGAACTTTCTGATTGTCCAGCGGAACTACTTCACCCCCCTGAAGATTGTAACGTGAATTCCACATTGCCCTTCACTCTTCAGATTTGTC
GAGTTGAAGATCTAACGGTTGAAGGCACCATAACTGGATCTGTTATTCACTTTCACTGGGTCAGGGATATATTTGTTTACCTATCTGGTGCAATTAGTGCTTCTGGTCTT
GGTATGCATTTTTCTTCCAATTATTTTGTTCTTACCTGGCAGGTTCAAGTAGTTTTAATGAAAAATTGTTAA
mRNA sequenceShow/hide mRNA sequence
TGCGGGTGCTGCAGGAACGTATTACGATGCTGTGCCTCGAAGCCTTATTGTTAGCAATGACAACTTATCTACTCAGACGGATACACTTCTTCTAACATTTCCCAAGCAGC
CTCTTTGGACAAATGTGTACATTCAAAACCATGCTAAGGCTTTGGTTCCTTTGTTTTGGAGCCGTGTACAGGTTCAAGGACAAATTCATTTATCAGTTGGTGCAGTCCTG
TCCTTTGGGCTTGCTCATTACGCATCATCAGAATTTGAGTTAATTGCAGAAGAGCTTCTTATGAGCAATTCTGTTATTAAGGCAAGTAGCAGCTCCTTTTGTTTCCCATC
TATCGAGAGCTATATTTTAGCCAAAAATTATTCTTTGGACTTTCTCAAGAGTGTGTTTCATATGAGACCACGACCCTACTGTGAACTTTCTGATTGTCCAGCGGAACTAC
TTCACCCCCCTGAAGATTGTAACGTGAATTCCACATTGCCCTTCACTCTTCAGATTTGTCGAGTTGAAGATCTAACGGTTGAAGGCACCATAACTGGATCTGTTATTCAC
TTTCACTGGGTCAGGGATATATTTGTTTACCTATCTGGTGCAATTAGTGCTTCTGGTCTTGGTATGCATTTTTCTTCCAATTATTTTGTTCTTACCTGGCAGGTTCAAGT
AGTTTTAATGAAAAATTGTTAA
Protein sequenceShow/hide protein sequence
MSNSVIKASSSSFCFPSIESYILAKNYSLDFLKSVFHMRPRPYCELSDCPAELLHPPEDCNVNSTLPFTLQICRVEDLTVEGTITGSVIHFHWVRDIFVYLSGAISASGL
GMHFSSNYFVLTWQVQVVLMKNC